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The map label for this gene is whiA [H]

Identifier: 167039834

GI number: 167039834

Start: 1225577

End: 1226533

Strand: Direct

Name: whiA [H]

Synonym: Teth514_1189

Alternate gene names: 167039834

Gene position: 1225577-1226533 (Clockwise)

Preceding gene: 167039833

Following gene: 167039835

Centisome position: 49.88

GC content: 30.83

Gene sequence:

>957_bases
ATGTCATTTTCTTCAGATACAAAAGACGAATTGGCAAGGATTTATCCTGAAGAGGAAGAAAGTAAAATAGCAGAGTTAGC
TGCTTTGATTAGGACGATAGGCAGCATTTCAATGTATGGCAATGGAAAAATTTCTTTGACCTTTACTACAGAAAATGCTT
CTGTGGCGAGATTAGTTTTTAAGTTAATAAAAGATTTATTTGGAATAATTCCTGAGACAATGGTAAGAAGAGGTAGATAT
CTAAAAAAAACCTTAAGCTACCTTATCTTTGTACCTGATACAAAAATTGCAGAAGAAATTTTAGGTAAAGTTAAGATATT
GAATTATGAGAAAGGTCATATAAAATTAAATTATGGGATAGACCAAAAGATTTTAAAAAACAGTAAAGCAAAAAAGGCTT
ATTTGAGAGGAGCTTTTTTGGGGGGTGGTTCAATAAGCGATCCTGAAAAAGCTTATCATATGGAGTTTATTACTCATAAT
TTAGAACACGGGAAAGATTTAAGTAAATTGATAAATTCTTTTGACTTAAATTCAAAGGTTATTGCAAGAAAAAATAATTA
TGTAGTATACTTAAAAGAAGGAGAGCAAATTGTTGATGTTTTAAATATAATAGGAGCCCACAGTGCTCTTTTGAACTTGG
AAAATATACGAGTATACAAAGAAATGAGAAACAATGTAAATAGAATTGTAAATTGTGAAACTGCAAATTTGACAAAAACT
ATTAATGCATCTTTAAGGCAAATAGAGAGTATAAATTATATTAAAGAAACAGTAGGACTTGATTATTTGCCGCCTAATTT
GAAAGAGGTGGCGGAACTCAGGATTAATTATCCTGATCTGAGCTTAAAAGAATTAGGACAAATGCTAGTTCCTCCTGTCG
GTAAGTCAGGAGTGAATCATAGACTTAGGAAGATTGAAGAAATTTCAAAGAAATTGAAAGAGAGGAGAGTTCAATAA

Upstream 100 bases:

>100_bases
ATAAACTTATAAACCCCTTTTTGTTCATTTGTTTTTTAAAGGGGTTTTTTTTTTGAAATAATGTAGTATAATAAAGATAA
GCCTATTGAGGTGATGCTTT

Downstream 100 bases:

>100_bases
TGAAAGAGGTTACGATTGAAATTAAAAATAAGACGGGGCTTCATGCAAGACCTGCAGCATTATTTGTACAAACTGCCAGC
AAATTTTCCTCACAAATATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 317

Protein sequence:

>318_residues
MSFSSDTKDELARIYPEEEESKIAELAALIRTIGSISMYGNGKISLTFTTENASVARLVFKLIKDLFGIIPETMVRRGRY
LKKTLSYLIFVPDTKIAEEILGKVKILNYEKGHIKLNYGIDQKILKNSKAKKAYLRGAFLGGGSISDPEKAYHMEFITHN
LEHGKDLSKLINSFDLNSKVIARKNNYVVYLKEGEQIVDVLNIIGAHSALLNLENIRVYKEMRNNVNRIVNCETANLTKT
INASLRQIESINYIKETVGLDYLPPNLKEVAELRINYPDLSLKELGQMLVPPVGKSGVNHRLRKIEEISKKLKERRVQ

Sequences:

>Translated_318_residues
MSFSSDTKDELARIYPEEEESKIAELAALIRTIGSISMYGNGKISLTFTTENASVARLVFKLIKDLFGIIPETMVRRGRY
LKKTLSYLIFVPDTKIAEEILGKVKILNYEKGHIKLNYGIDQKILKNSKAKKAYLRGAFLGGGSISDPEKAYHMEFITHN
LEHGKDLSKLINSFDLNSKVIARKNNYVVYLKEGEQIVDVLNIIGAHSALLNLENIRVYKEMRNNVNRIVNCETANLTKT
INASLRQIESINYIKETVGLDYLPPNLKEVAELRINYPDLSLKELGQMLVPPVGKSGVNHRLRKIEEISKKLKERRVQ
>Mature_317_residues
SFSSDTKDELARIYPEEEESKIAELAALIRTIGSISMYGNGKISLTFTTENASVARLVFKLIKDLFGIIPETMVRRGRYL
KKTLSYLIFVPDTKIAEEILGKVKILNYEKGHIKLNYGIDQKILKNSKAKKAYLRGAFLGGGSISDPEKAYHMEFITHNL
EHGKDLSKLINSFDLNSKVIARKNNYVVYLKEGEQIVDVLNIIGAHSALLNLENIRVYKEMRNNVNRIVNCETANLTKTI
NASLRQIESINYIKETVGLDYLPPNLKEVAELRINYPDLSLKELGQMLVPPVGKSGVNHRLRKIEEISKKLKERRVQ

Specific function: May be required for sporulation [H]

COG id: COG1481

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the whiA transcriptional regulatory family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003802
- InterPro:   IPR023054
- InterPro:   IPR018478 [H]

Pfam domain/function: PF02650 HTH_WhiA; PF10298 WhiA_N [H]

EC number: NA

Molecular weight: Translated: 36097; Mature: 35965

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFSSDTKDELARIYPEEEESKIAELAALIRTIGSISMYGNGKISLTFTTENASVARLVF
CCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCEEEECCCEEEEEEEECCHHHHHHHH
KLIKDLFGIIPETMVRRGRYLKKTLSYLIFVPDTKIAEEILGKVKILNYEKGHIKLNYGI
HHHHHHHHHCHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHEEEEEECCCEEEEECCC
DQKILKNSKAKKAYLRGAFLGGGSISDPEKAYHMEFITHNLEHGKDLSKLINSFDLNSKV
CHHHHHCCHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEE
IARKNNYVVYLKEGEQIVDVLNIIGAHSALLNLENIRVYKEMRNNVNRIVNCETANLTKT
EEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHH
INASLRQIESINYIKETVGLDYLPPNLKEVAELRINYPDLSLKELGQMLVPPVGKSGVNH
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHH
RLRKIEEISKKLKERRVQ
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SFSSDTKDELARIYPEEEESKIAELAALIRTIGSISMYGNGKISLTFTTENASVARLVF
CCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCEEEECCCEEEEEEEECCHHHHHHHH
KLIKDLFGIIPETMVRRGRYLKKTLSYLIFVPDTKIAEEILGKVKILNYEKGHIKLNYGI
HHHHHHHHHCHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHEEEEEECCCEEEEECCC
DQKILKNSKAKKAYLRGAFLGGGSISDPEKAYHMEFITHNLEHGKDLSKLINSFDLNSKV
CHHHHHCCHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEE
IARKNNYVVYLKEGEQIVDVLNIIGAHSALLNLENIRVYKEMRNNVNRIVNCETANLTKT
EEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHH
INASLRQIESINYIKETVGLDYLPPNLKEVAELRINYPDLSLKELGQMLVPPVGKSGVNH
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHH
RLRKIEEISKKLKERRVQ
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA