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The map label for this gene is ganQ [H]

Identifier: 167039828

GI number: 167039828

Start: 1219428

End: 1220321

Strand: Direct

Name: ganQ [H]

Synonym: Teth514_1183

Alternate gene names: 167039828

Gene position: 1219428-1220321 (Clockwise)

Preceding gene: 167039827

Following gene: 167039829

Centisome position: 49.63

GC content: 36.69

Gene sequence:

>894_bases
GTGGAATATGCAAGTGTTAAAATTGGTGACAAAAAAACGACTAAAAAGATTTATTATAGGGAAAAATTAAAACCTCATGA
AAAAGTATCTCTATGGATTAGCCGACTTATTATATGGGCTGTAATTGCAATAATGATGTTTCCTGTAGCTTGGGTAGTAG
GAGCGTCTATGGCGCCTGGAGATGCCTTTTTCTCCGGTTCAATTTTTCCGCAACATATGACATTTCAAAATTATAAGGAT
GTGCTTGTTAAGACTAATTTTTTACTTTGGGTAAAAAATAGTATGATTTTAAGCGTTGGTGTAGCAACTATTCAATTATT
TTTGACTGCTACGTCAGCTTATGCTTTCAGTAGAATGAAGTTTGCTGGAAGAAAAAATGGCTTAAAGACTCTCTTAATAC
TTCAGATGTTTCCTACGTTTATGGCATTACCTGCTATATTTGGTATAATGGCAAAATTAAACCTTCTGGATAATCTCTAT
GCCCTTATGCTGGTCATGGCAGGTAGCAGCGCTTTTAGTATATGGCTTTTAAAAGGCTATATTGATAGTCTTCCAAAAGA
GTTGGACGAAGCTGCTTTAGTTGATGGAGCTACTCATTGGCAAATTTTCACGAAAATAATTCTTCCTTTGGCGACTCCCA
TGCTTGTAGTTATATTCTTATTTAGCTTTATGGGAGTATACAGTGAATTTATTTTGTCCAGTGCGGTACTAAAGTCACCT
GAAAATTACACAATAGCGTTAGGGCTTCAAAGGTTTATTCAAAACCAATTTTCGGCCCACTGGACTCAATTTGCGGCAGC
CTCTGTTATGGCATCTTTGCCTCTTGTAATACTCTTTATGGTATTGCAGAGGTATTTGCAAGCTGGTCTTGCAGCAGGTG
CAGTAAAAGGATAA

Upstream 100 bases:

>100_bases
GACTTGGCGGCAGCTTTGTCTATAATTATATTTTTGATAATTGGCACATTGAGCCTTATCAATATGAAGATGACTCGTGC
TTTCGAGGAGGTGGATTAAG

Downstream 100 bases:

>100_bases
AAAATTGTTACACATGGAACAATTTGTAAATACCGGATTATTTCCGGTATTTTTATTTTGTATATAAATAAAAATTTATG
GCAAGAATAAATATGTATTT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MEYASVKIGDKKTTKKIYYREKLKPHEKVSLWISRLIIWAVIAIMMFPVAWVVGASMAPGDAFFSGSIFPQHMTFQNYKD
VLVKTNFLLWVKNSMILSVGVATIQLFLTATSAYAFSRMKFAGRKNGLKTLLILQMFPTFMALPAIFGIMAKLNLLDNLY
ALMLVMAGSSAFSIWLLKGYIDSLPKELDEAALVDGATHWQIFTKIILPLATPMLVVIFLFSFMGVYSEFILSSAVLKSP
ENYTIALGLQRFIQNQFSAHWTQFAAASVMASLPLVILFMVLQRYLQAGLAAGAVKG

Sequences:

>Translated_297_residues
MEYASVKIGDKKTTKKIYYREKLKPHEKVSLWISRLIIWAVIAIMMFPVAWVVGASMAPGDAFFSGSIFPQHMTFQNYKD
VLVKTNFLLWVKNSMILSVGVATIQLFLTATSAYAFSRMKFAGRKNGLKTLLILQMFPTFMALPAIFGIMAKLNLLDNLY
ALMLVMAGSSAFSIWLLKGYIDSLPKELDEAALVDGATHWQIFTKIILPLATPMLVVIFLFSFMGVYSEFILSSAVLKSP
ENYTIALGLQRFIQNQFSAHWTQFAAASVMASLPLVILFMVLQRYLQAGLAAGAVKG
>Mature_297_residues
MEYASVKIGDKKTTKKIYYREKLKPHEKVSLWISRLIIWAVIAIMMFPVAWVVGASMAPGDAFFSGSIFPQHMTFQNYKD
VLVKTNFLLWVKNSMILSVGVATIQLFLTATSAYAFSRMKFAGRKNGLKTLLILQMFPTFMALPAIFGIMAKLNLLDNLY
ALMLVMAGSSAFSIWLLKGYIDSLPKELDEAALVDGATHWQIFTKIILPLATPMLVVIFLFSFMGVYSEFILSSAVLKSP
ENYTIALGLQRFIQNQFSAHWTQFAAASVMASLPLVILFMVLQRYLQAGLAAGAVKG

Specific function: Could be part of a binding-protein-dependent transport system for arabinogalactan oligomers; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG3833

COG function: function code G; ABC-type maltose transport systems, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1790464, Length=291, Percent_Identity=35.7388316151203, Blast_Score=174, Evalue=6e-45,
Organism=Escherichia coli, GI1787571, Length=234, Percent_Identity=31.1965811965812, Blast_Score=126, Evalue=2e-30,
Organism=Escherichia coli, GI1789860, Length=258, Percent_Identity=23.2558139534884, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33127; Mature: 33127

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYASVKIGDKKTTKKIYYREKLKPHEKVSLWISRLIIWAVIAIMMFPVAWVVGASMAPG
CCCCEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DAFFSGSIFPQHMTFQNYKDVLVKTNFLLWVKNSMILSVGVATIQLFLTATSAYAFSRMK
CCCCCCCCCCCCCCHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH
FAGRKNGLKTLLILQMFPTFMALPAIFGIMAKLNLLDNLYALMLVMAGSSAFSIWLLKGY
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
IDSLPKELDEAALVDGATHWQIFTKIILPLATPMLVVIFLFSFMGVYSEFILSSAVLKSP
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ENYTIALGLQRFIQNQFSAHWTQFAAASVMASLPLVILFMVLQRYLQAGLAAGAVKG
CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MEYASVKIGDKKTTKKIYYREKLKPHEKVSLWISRLIIWAVIAIMMFPVAWVVGASMAPG
CCCCEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DAFFSGSIFPQHMTFQNYKDVLVKTNFLLWVKNSMILSVGVATIQLFLTATSAYAFSRMK
CCCCCCCCCCCCCCHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH
FAGRKNGLKTLLILQMFPTFMALPAIFGIMAKLNLLDNLYALMLVMAGSSAFSIWLLKGY
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
IDSLPKELDEAALVDGATHWQIFTKIILPLATPMLVVIFLFSFMGVYSEFILSSAVLKSP
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ENYTIALGLQRFIQNQFSAHWTQFAAASVMASLPLVILFMVLQRYLQAGLAAGAVKG
CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]