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The map label for this gene is dedA [H]

Identifier: 167039795

GI number: 167039795

Start: 1189832

End: 1190467

Strand: Direct

Name: dedA [H]

Synonym: Teth514_1148

Alternate gene names: 167039795

Gene position: 1189832-1190467 (Clockwise)

Preceding gene: 167039794

Following gene: 167039796

Centisome position: 48.42

GC content: 33.18

Gene sequence:

>636_bases
ATGGACCTTATAAAAAACTTCATTGATATTGTATTGCATCTTGATAAGTATTTAGGCAGTGTTATTCAAACTTATGGCAC
ATATACTTACAGCATTTTGTTTTTTATTATTTTCCTTGAGACTGGCTTTGTGGTGACGCCTTTTTTGCCTGGAGATTCTC
TTCTCTTTGCAGCAGGGACTTTTGCAGCAATTGGCAGTTTAAATGTATTTTATGTGGTTATACTTTTGGCATCTGCTGCC
ATATTAGGAGATACAATAAACTATCATATAGGGAAATTTGTGGGAGAAAAGATTTATGAAAGAGAAAATCTACGACTAAT
AAAAAGAGAGCATTTGCTGGAAGCTCGTGACTTTTATGAAAAGTATGGTTCTATTACTATTGTTGTAGGAAGATTTATAC
CAATTATTAGAACTTTTGTCCCTTTTGTAGCGGGTATTGGACAAATGAGATATTTTAAGTTTTTATTTTACAATGCATTA
GGAGGAACGCTGTGGGTTTTACTTTTTACTTTAGGTGGGTACTATTTTGGGAATTTGCAAATAGTGAGAGACCATTTTGG
ATTGGTGACAATTGCGATAATTGTCATATCGTTAATACCCGCAATTATAAGCGTTTTAAAAAGGAAAAAACGTTGA

Upstream 100 bases:

>100_bases
ATTCTATTAAATTTTCATATTTTTTTACAAAACCTTTCATATATATAGTATAATTAATGCTGTGAATAAGAGTTACTATA
TATATGAAAGGATGAAGTAA

Downstream 100 bases:

>100_bases
TGCAGGAAGTTTTTGATAAAATGTGTGCTGTTTCGATATAATATATTATTTAATATATTTTAAATTTTATGAAAGGGGAA
TATGGATTATGGGCCTGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Protein DSG-1 [H]

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MDLIKNFIDIVLHLDKYLGSVIQTYGTYTYSILFFIIFLETGFVVTPFLPGDSLLFAAGTFAAIGSLNVFYVVILLASAA
ILGDTINYHIGKFVGEKIYERENLRLIKREHLLEARDFYEKYGSITIVVGRFIPIIRTFVPFVAGIGQMRYFKFLFYNAL
GGTLWVLLFTLGGYYFGNLQIVRDHFGLVTIAIIVISLIPAIISVLKRKKR

Sequences:

>Translated_211_residues
MDLIKNFIDIVLHLDKYLGSVIQTYGTYTYSILFFIIFLETGFVVTPFLPGDSLLFAAGTFAAIGSLNVFYVVILLASAA
ILGDTINYHIGKFVGEKIYERENLRLIKREHLLEARDFYEKYGSITIVVGRFIPIIRTFVPFVAGIGQMRYFKFLFYNAL
GGTLWVLLFTLGGYYFGNLQIVRDHFGLVTIAIIVISLIPAIISVLKRKKR
>Mature_211_residues
MDLIKNFIDIVLHLDKYLGSVIQTYGTYTYSILFFIIFLETGFVVTPFLPGDSLLFAAGTFAAIGSLNVFYVVILLASAA
ILGDTINYHIGKFVGEKIYERENLRLIKREHLLEARDFYEKYGSITIVVGRFIPIIRTFVPFVAGIGQMRYFKFLFYNAL
GGTLWVLLFTLGGYYFGNLQIVRDHFGLVTIAIIVISLIPAIISVLKRKKR

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=210, Percent_Identity=49.047619047619, Blast_Score=219, Evalue=8e-59,
Organism=Escherichia coli, GI1789481, Length=149, Percent_Identity=35.5704697986577, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1789384, Length=156, Percent_Identity=32.6923076923077, Blast_Score=95, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 23944; Mature: 23944

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLIKNFIDIVLHLDKYLGSVIQTYGTYTYSILFFIIFLETGFVVTPFLPGDSLLFAAGT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHH
FAAIGSLNVFYVVILLASAAILGDTINYHIGKFVGEKIYERENLRLIKREHLLEARDFYE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KYGSITIVVGRFIPIIRTFVPFVAGIGQMRYFKFLFYNALGGTLWVLLFTLGGYYFGNLQ
HHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
IVRDHFGLVTIAIIVISLIPAIISVLKRKKR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDLIKNFIDIVLHLDKYLGSVIQTYGTYTYSILFFIIFLETGFVVTPFLPGDSLLFAAGT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHH
FAAIGSLNVFYVVILLASAAILGDTINYHIGKFVGEKIYERENLRLIKREHLLEARDFYE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KYGSITIVVGRFIPIIRTFVPFVAGIGQMRYFKFLFYNALGGTLWVLLFTLGGYYFGNLQ
HHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
IVRDHFGLVTIAIIVISLIPAIISVLKRKKR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]