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The map label for this gene is nrdD [H]

Identifier: 167039791

GI number: 167039791

Start: 1183623

End: 1185701

Strand: Direct

Name: nrdD [H]

Synonym: Teth514_1144

Alternate gene names: 167039791

Gene position: 1183623-1185701 (Clockwise)

Preceding gene: 167039790

Following gene: 167039792

Centisome position: 48.17

GC content: 35.16

Gene sequence:

>2079_bases
ATGAAAATTGCTATGAAAGTTATAAAAAGGAATGGAAATGAAGTTGAATTTGATAAGTCTAAAATTGTAAATGCTATATA
TAAGGCTTTTAAGGCAGTAGGAGAAGGGGAGTATGAGCAAGCAGTTCAAATAGCTGATGAAGTTACAGACTATGTTGAAA
AGCATTTTGAAGGGATAGCCACTGTAGAACAGATTCAAGATATTGTAGAGCAATATTTGATAAAATATGGTCATGCCAAA
GCAGCAAAAGCTTATATTTTGTACAGAAAGCAGCATCAAGACATAAGAGAATTCAAAAAGATGTTTATGGATATTGAAAG
AATGGTGGATGAATACATAGGAAAACAGGACTGGAGAGTAAATGAAAATAGCAATATGAGTTATTCTCTTCAAGGCTTAA
ATAACCATATTTCCAGTACGATAACGGCCCATTACTGGTTAAATAAAATATACCCTCCAGAAGTTAGAGATGCCCACGTA
AATGGAGATTTGCACATTCATGACTTAGGGCTTTTATCTGTATATTGCTGTGGATGGGATTTAAGAGATTTACTGCTTTC
TGGATTTACAGGAGTAGAAGGAAAAGTTCAAAGCAAACCTCCAAAGCACTTTAGGTCTGCTCTTGGGCAGATTGTCAACT
TTTTCTATACACTTCAAGGGGAAGCAGCAGGAGCTCAGGCTTTTTCCAACTTTGATACTTATTTAGCGCCTTTTATATAT
TATGATAATCTTTCCTACAAAGAGGTAAAACAGGCTTTGCAGGAATTTATATTTAATATAAATGTGCCTACAAGAGTAGG
ATTTCAAACCCCTTTTACAAACATAACTATGGACTTGGTGGTACCGGAGATTATGGCAGATGAACCTGTCATAATTGGCG
GTCAATTGATGGACAAAACTTACAAAGAATTTCGAAAAGAAATGGACATGCTAAATATGGCTTTTGCAGAAGTCATGATG
GAGGGAGATGCCAGCGGCAGGATATTCACTTTTCCAATACCAACTTATAATATAACTAAAAATTTTGACTGGGATAGCCC
TGTAGTAGATAAAATAATGGAAATGACTGCAAAGTATGGTCTTCCTTACTTTAGCAATTTTGTAAATAGCGATTTGGATC
CAAATGATGTTCGCAGTATGTGCTGTCGCCTCAGGTTGGACAACAGAGAGTTGAGAAAAAGAGGGGGAGGACTTTTTGGT
GCAAATCCTTTGACGGGTTCAATAGGTGTCGTAACAATAAATATGCCAAGGATTGGGTATTTATCAAAATCAAAAGAGGA
ATTTTTCAAAAGGTTAGAAAGGCTCATGGATATAGCTAAGACAAGCCTTGAAATAAAAAGAGAAGTATTAGAAAAAATGA
CTGAAATGGGACTTTATCCTTATTCGAAATTTTACTTAAAGGATATAAAGAAAAGATTCGGTTATTACTGGCAAAATCAT
TTTAACACAATAGGACTTATTGGCATGAATGAAGCACTATTAAATTTCATGGGAGTAAGCATAGCTACTGAAGAAGGAAG
AAATTTTGCTCTTGAAGTATTAGATTTTATGAGGCACAAATTAGAACAATATCAATTAGAATCAAATATGATGTACAATT
TAGAAGCTTCTCCTGCAGAAGGAGCTTCCTACAGATTAGCTAAAAAAGATAAAGTATTATTCCCAGATATAATAACTGCA
GGTAGCGATGTGCCTTACTATACTAATTCCACCCAGCTTCCTGTGGACTTTACTGAAGATATATTTACTGCTTTAGACTT
GCAAGAAGAGTTACAAACAAAATACACAGGAGGTACGGTATTTCATGGGTTCATTGGAGAGAGTATAAACGATGTAGCTA
CTTGTAAGGCTTTAGTCAAAAAAATAGCTTATAATTACAGACTTCCCTATTACACGATAACTCCAACCTTTTCAATTTGT
GAGGACCATGGTTATATATCAGGAGAACATTTTGAGTGCCCATATTGTGGGAAAGAATGTGAAGTTTACAGTCGAGTTGT
TGGCTACTACAGACCAGTTAAGAATTGGAATGAAGGTAAGAAAAAAGAGTTCAAGGACAGAAAGGAATTTGTTGTATGA

Upstream 100 bases:

>100_bases
AGAGGAGGTGAGGTACCTTTGTATACCTCTTAACTGGCCGTAGGAGTTAAGAGGTATAATTATTAACCAAAGAATTATTA
AAAAATGGAGGTTTTAAACT

Downstream 100 bases:

>100_bases
TATACAATTTTATGCCTGTTTCTTTTATTGATTTCCCAGGAAAAATTGCAGCCACTGTTTTTATAAGTGGCTGCAATTTT
AAGTGTCCTTATTGCCACAA

Product: anaerobic ribonucleoside triphosphate reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 692; Mature: 692

Protein sequence:

>692_residues
MKIAMKVIKRNGNEVEFDKSKIVNAIYKAFKAVGEGEYEQAVQIADEVTDYVEKHFEGIATVEQIQDIVEQYLIKYGHAK
AAKAYILYRKQHQDIREFKKMFMDIERMVDEYIGKQDWRVNENSNMSYSLQGLNNHISSTITAHYWLNKIYPPEVRDAHV
NGDLHIHDLGLLSVYCCGWDLRDLLLSGFTGVEGKVQSKPPKHFRSALGQIVNFFYTLQGEAAGAQAFSNFDTYLAPFIY
YDNLSYKEVKQALQEFIFNINVPTRVGFQTPFTNITMDLVVPEIMADEPVIIGGQLMDKTYKEFRKEMDMLNMAFAEVMM
EGDASGRIFTFPIPTYNITKNFDWDSPVVDKIMEMTAKYGLPYFSNFVNSDLDPNDVRSMCCRLRLDNRELRKRGGGLFG
ANPLTGSIGVVTINMPRIGYLSKSKEEFFKRLERLMDIAKTSLEIKREVLEKMTEMGLYPYSKFYLKDIKKRFGYYWQNH
FNTIGLIGMNEALLNFMGVSIATEEGRNFALEVLDFMRHKLEQYQLESNMMYNLEASPAEGASYRLAKKDKVLFPDIITA
GSDVPYYTNSTQLPVDFTEDIFTALDLQEELQTKYTGGTVFHGFIGESINDVATCKALVKKIAYNYRLPYYTITPTFSIC
EDHGYISGEHFECPYCGKECEVYSRVVGYYRPVKNWNEGKKKEFKDRKEFVV

Sequences:

>Translated_692_residues
MKIAMKVIKRNGNEVEFDKSKIVNAIYKAFKAVGEGEYEQAVQIADEVTDYVEKHFEGIATVEQIQDIVEQYLIKYGHAK
AAKAYILYRKQHQDIREFKKMFMDIERMVDEYIGKQDWRVNENSNMSYSLQGLNNHISSTITAHYWLNKIYPPEVRDAHV
NGDLHIHDLGLLSVYCCGWDLRDLLLSGFTGVEGKVQSKPPKHFRSALGQIVNFFYTLQGEAAGAQAFSNFDTYLAPFIY
YDNLSYKEVKQALQEFIFNINVPTRVGFQTPFTNITMDLVVPEIMADEPVIIGGQLMDKTYKEFRKEMDMLNMAFAEVMM
EGDASGRIFTFPIPTYNITKNFDWDSPVVDKIMEMTAKYGLPYFSNFVNSDLDPNDVRSMCCRLRLDNRELRKRGGGLFG
ANPLTGSIGVVTINMPRIGYLSKSKEEFFKRLERLMDIAKTSLEIKREVLEKMTEMGLYPYSKFYLKDIKKRFGYYWQNH
FNTIGLIGMNEALLNFMGVSIATEEGRNFALEVLDFMRHKLEQYQLESNMMYNLEASPAEGASYRLAKKDKVLFPDIITA
GSDVPYYTNSTQLPVDFTEDIFTALDLQEELQTKYTGGTVFHGFIGESINDVATCKALVKKIAYNYRLPYYTITPTFSIC
EDHGYISGEHFECPYCGKECEVYSRVVGYYRPVKNWNEGKKKEFKDRKEFVV
>Mature_692_residues
MKIAMKVIKRNGNEVEFDKSKIVNAIYKAFKAVGEGEYEQAVQIADEVTDYVEKHFEGIATVEQIQDIVEQYLIKYGHAK
AAKAYILYRKQHQDIREFKKMFMDIERMVDEYIGKQDWRVNENSNMSYSLQGLNNHISSTITAHYWLNKIYPPEVRDAHV
NGDLHIHDLGLLSVYCCGWDLRDLLLSGFTGVEGKVQSKPPKHFRSALGQIVNFFYTLQGEAAGAQAFSNFDTYLAPFIY
YDNLSYKEVKQALQEFIFNINVPTRVGFQTPFTNITMDLVVPEIMADEPVIIGGQLMDKTYKEFRKEMDMLNMAFAEVMM
EGDASGRIFTFPIPTYNITKNFDWDSPVVDKIMEMTAKYGLPYFSNFVNSDLDPNDVRSMCCRLRLDNRELRKRGGGLFG
ANPLTGSIGVVTINMPRIGYLSKSKEEFFKRLERLMDIAKTSLEIKREVLEKMTEMGLYPYSKFYLKDIKKRFGYYWQNH
FNTIGLIGMNEALLNFMGVSIATEEGRNFALEVLDFMRHKLEQYQLESNMMYNLEASPAEGASYRLAKKDKVLFPDIITA
GSDVPYYTNSTQLPVDFTEDIFTALDLQEELQTKYTGGTVFHGFIGESINDVATCKALVKKIAYNYRLPYYTITPTFSIC
EDHGYISGEHFECPYCGKECEVYSRVVGYYRPVKNWNEGKKKEFKDRKEFVV

Specific function: Unknown

COG id: COG1328

COG function: function code F; Oxygen-sensitive ribonucleoside-triphosphate reductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glycine radical domain [H]

Homologues:

Organism=Escherichia coli, GI1790686, Length=738, Percent_Identity=23.0352303523035, Blast_Score=135, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005144
- InterPro:   IPR001150
- InterPro:   IPR019777
- InterPro:   IPR012833 [H]

Pfam domain/function: PF03477 ATP-cone; PF01228 Gly_radical [H]

EC number: =1.17.4.2 [H]

Molecular weight: Translated: 79834; Mature: 79834

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: PS51161 ATP_CONE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIAMKVIKRNGNEVEFDKSKIVNAIYKAFKAVGEGEYEQAVQIADEVTDYVEKHFEGIA
CHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
TVEQIQDIVEQYLIKYGHAKAAKAYILYRKQHQDIREFKKMFMDIERMVDEYIGKQDWRV
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
NENSNMSYSLQGLNNHISSTITAHYWLNKIYPPEVRDAHVNGDLHIHDLGLLSVYCCGWD
CCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHCCCC
LRDLLLSGFTGVEGKVQSKPPKHFRSALGQIVNFFYTLQGEAAGAQAFSNFDTYLAPFIY
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHE
YDNLSYKEVKQALQEFIFNINVPTRVGFQTPFTNITMDLVVPEIMADEPVIIGGQLMDKT
ECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCCEEECHHHHHHH
YKEFRKEMDMLNMAFAEVMMEGDASGRIFTFPIPTYNITKNFDWDSPVVDKIMEMTAKYG
HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHC
LPYFSNFVNSDLDPNDVRSMCCRLRLDNRELRKRGGGLFGANPLTGSIGVVTINMPRIGY
CHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCC
LSKSKEEFFKRLERLMDIAKTSLEIKREVLEKMTEMGLYPYSKFYLKDIKKRFGYYWQNH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHC
FNTIGLIGMNEALLNFMGVSIATEEGRNFALEVLDFMRHKLEQYQLESNMMYNLEASPAE
CCEEEEEECHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCC
GASYRLAKKDKVLFPDIITAGSDVPYYTNSTQLPVDFTEDIFTALDLQEELQTKYTGGTV
CCCEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCE
FHGFIGESINDVATCKALVKKIAYNYRLPYYTITPTFSICEDHGYISGEHFECPYCGKEC
EEHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHCCCCCCCCCCCCCCCCCCHH
EVYSRVVGYYRPVKNWNEGKKKEFKDRKEFVV
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MKIAMKVIKRNGNEVEFDKSKIVNAIYKAFKAVGEGEYEQAVQIADEVTDYVEKHFEGIA
CHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
TVEQIQDIVEQYLIKYGHAKAAKAYILYRKQHQDIREFKKMFMDIERMVDEYIGKQDWRV
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
NENSNMSYSLQGLNNHISSTITAHYWLNKIYPPEVRDAHVNGDLHIHDLGLLSVYCCGWD
CCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHCCCC
LRDLLLSGFTGVEGKVQSKPPKHFRSALGQIVNFFYTLQGEAAGAQAFSNFDTYLAPFIY
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHE
YDNLSYKEVKQALQEFIFNINVPTRVGFQTPFTNITMDLVVPEIMADEPVIIGGQLMDKT
ECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCCEEECHHHHHHH
YKEFRKEMDMLNMAFAEVMMEGDASGRIFTFPIPTYNITKNFDWDSPVVDKIMEMTAKYG
HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHC
LPYFSNFVNSDLDPNDVRSMCCRLRLDNRELRKRGGGLFGANPLTGSIGVVTINMPRIGY
CHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCC
LSKSKEEFFKRLERLMDIAKTSLEIKREVLEKMTEMGLYPYSKFYLKDIKKRFGYYWQNH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHC
FNTIGLIGMNEALLNFMGVSIATEEGRNFALEVLDFMRHKLEQYQLESNMMYNLEASPAE
CCEEEEEECHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCC
GASYRLAKKDKVLFPDIITAGSDVPYYTNSTQLPVDFTEDIFTALDLQEELQTKYTGGTV
CCCEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCE
FHGFIGESINDVATCKALVKKIAYNYRLPYYTITPTFSICEDHGYISGEHFECPYCGKEC
EEHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHCCCCCCCCCCCCCCCCCCHH
EVYSRVVGYYRPVKNWNEGKKKEFKDRKEFVV
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]