| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is spoVD [H]
Identifier: 167039761
GI number: 167039761
Start: 1155145
End: 1156806
Strand: Reverse
Name: spoVD [H]
Synonym: Teth514_1112
Alternate gene names: 167039761
Gene position: 1156806-1155145 (Counterclockwise)
Preceding gene: 167039773
Following gene: 167039757
Centisome position: 47.08
GC content: 35.62
Gene sequence:
>1662_bases TTGACATCATATGTAAAAAAACGAACATTTACCATATTTATCTTTTTTACTATTATGATTTTCGCCCTTATCGTAAGGCT TATATGGATACAGGGTATAAACTCTGAAAAACTTGCCATGGCAGTCGAAAGGCAAAGTACTGCTGATATCATATTAAAGC CTCAACGGGGCAATATTTATGATGTAAACGGGAATATCCTTGCCTGTAATGTTCCAGCAGGAGATGTATTTGCGGCTCCT AAATTTATAAAAAATCCAGAAAAAGCTTCAGAAGAACTCTATAAATACTTAAATATGGACAAAGACTCGCTTTATAAAAT TCTTTCAAATAAAAACTCAGAGTGGGCTGTACTTGGCAGGTCCATTCCTCTTGAAAATATAAATAAAATAAAAAGTCTTA ACATACCAGGCATATATGTAGAAGATACTTTTATGAGAAATTATCCCAACGACAAAATGCTATCACAAGTATTAGGTTTT GCAGGAATTGATGGTAATGGTTTGTATGGCCTTGAATACTCTTTAGATAAATACTTGGGTGGTGTACCTGGCCGTGAAAT CTCTCTTGTAGATAGAGAAGGTAGAAAAGTAGGAGTTCCAAAGTTTTACAAAGAACCTACAAACGGTGATAATATTGTCC TCACAATTGATTCTGTAATACAAAGTTATACAGAAAAAGCTATAAAAAAAGCATATGAAAAATATAAACCAGAAGATGGC ATAACAGCAATAGTTATGAATCCAAAAACTGGTGAAATACTTGCCATGGCTAATTTGCCCGATTTTGACCCAAATAATTG GCAAAATGTGCCTTCAAAGGAATACTGGTCAAACCCGGCAGTGTCAAGTACTTACGAACCCGCTTCAGTATTTAAAGTAA TAACCGCTTCTGCAGCATTAGAATCAGCTGTAGTTACACCAGACGAAAAATTCTACGACCCTGGATATTATATAGTCTCT GGTAAAAAAATTAGAAGTTGGAAAGCTTTGGGAGATATAACTTTTTCGCAAGCTATTGAAAAATCAAGTAATACAGTTTT TGTCCAAGTAGTAGAACGATTAGGTGTCGATGCCTTTTATAAATACATACAAGCTTTTGGTTTTGGTACTCCAACAGGAA TTGAGCTTCCTGGAGAAGCCAGTGGAATGATCTTGCCAAAGTCAAAGATATATCCTGTCGACCTCGCTACTATGTCTTTT GGTCAAGGAATCGCTGTAACTCCAATCCAAATGATTACAGCTTTTTCAGCCGTGATAAACGGTGGAAACCTCATGGTTCC ACATATTGTAAAATATATCGAAAACGGCGATAAAAAAATTAAAGAATATAAGCCTCAAATAGTTAGACAAGTTATCTCTA AAAAAACATCCGATACAATGAGACATATACTTGAAAAAACAGTAACAGAGGGTACCGGCCAAGCAGCAAAAGTACCTGGC TATACAGTAGGTGGAAAAACAGGTACAACGGAAAATTATGCTCCAGGGAAATACGTAGCATCATTTGCTGGATTTGCACC AGTTGAAAACCCAAAAATTGCAGTATTAGTTCTTGTTAAAAATCCAACACAAAATGGTCATATGGGAGGAGAAGTAGCCG CGCCAATAGCACAAGAAATATTAAGAGATACTCTTAGGTATTATGACACAGTAAAAAAGTAA
Upstream 100 bases:
>100_bases CAAAAACATTTCTATACTTTTATTTAATTAAATTGCAAAATATCTATGGTATAATTATATTGGATAAACAAAATCTTTAT AAAAAGGGGTTAGAATAAAA
Downstream 100 bases:
>100_bases AAAAATAATAATACCCGTTATTTTTAGTGCACCAACTGACTTACACTGTTTTTTATTTCCTCTGTTATATCAAAGGCATT TTTGTTATTTCCTATTCCTT
Product: peptidoglycan glycosyltransferase
Products: NA
Alternate protein names: Sporulation-specific penicillin-binding protein [H]
Number of amino acids: Translated: 553; Mature: 552
Protein sequence:
>553_residues MTSYVKKRTFTIFIFFTIMIFALIVRLIWIQGINSEKLAMAVERQSTADIILKPQRGNIYDVNGNILACNVPAGDVFAAP KFIKNPEKASEELYKYLNMDKDSLYKILSNKNSEWAVLGRSIPLENINKIKSLNIPGIYVEDTFMRNYPNDKMLSQVLGF AGIDGNGLYGLEYSLDKYLGGVPGREISLVDREGRKVGVPKFYKEPTNGDNIVLTIDSVIQSYTEKAIKKAYEKYKPEDG ITAIVMNPKTGEILAMANLPDFDPNNWQNVPSKEYWSNPAVSSTYEPASVFKVITASAALESAVVTPDEKFYDPGYYIVS GKKIRSWKALGDITFSQAIEKSSNTVFVQVVERLGVDAFYKYIQAFGFGTPTGIELPGEASGMILPKSKIYPVDLATMSF GQGIAVTPIQMITAFSAVINGGNLMVPHIVKYIENGDKKIKEYKPQIVRQVISKKTSDTMRHILEKTVTEGTGQAAKVPG YTVGGKTGTTENYAPGKYVASFAGFAPVENPKIAVLVLVKNPTQNGHMGGEVAAPIAQEILRDTLRYYDTVKK
Sequences:
>Translated_553_residues MTSYVKKRTFTIFIFFTIMIFALIVRLIWIQGINSEKLAMAVERQSTADIILKPQRGNIYDVNGNILACNVPAGDVFAAP KFIKNPEKASEELYKYLNMDKDSLYKILSNKNSEWAVLGRSIPLENINKIKSLNIPGIYVEDTFMRNYPNDKMLSQVLGF AGIDGNGLYGLEYSLDKYLGGVPGREISLVDREGRKVGVPKFYKEPTNGDNIVLTIDSVIQSYTEKAIKKAYEKYKPEDG ITAIVMNPKTGEILAMANLPDFDPNNWQNVPSKEYWSNPAVSSTYEPASVFKVITASAALESAVVTPDEKFYDPGYYIVS GKKIRSWKALGDITFSQAIEKSSNTVFVQVVERLGVDAFYKYIQAFGFGTPTGIELPGEASGMILPKSKIYPVDLATMSF GQGIAVTPIQMITAFSAVINGGNLMVPHIVKYIENGDKKIKEYKPQIVRQVISKKTSDTMRHILEKTVTEGTGQAAKVPG YTVGGKTGTTENYAPGKYVASFAGFAPVENPKIAVLVLVKNPTQNGHMGGEVAAPIAQEILRDTLRYYDTVKK >Mature_552_residues TSYVKKRTFTIFIFFTIMIFALIVRLIWIQGINSEKLAMAVERQSTADIILKPQRGNIYDVNGNILACNVPAGDVFAAPK FIKNPEKASEELYKYLNMDKDSLYKILSNKNSEWAVLGRSIPLENINKIKSLNIPGIYVEDTFMRNYPNDKMLSQVLGFA GIDGNGLYGLEYSLDKYLGGVPGREISLVDREGRKVGVPKFYKEPTNGDNIVLTIDSVIQSYTEKAIKKAYEKYKPEDGI TAIVMNPKTGEILAMANLPDFDPNNWQNVPSKEYWSNPAVSSTYEPASVFKVITASAALESAVVTPDEKFYDPGYYIVSG KKIRSWKALGDITFSQAIEKSSNTVFVQVVERLGVDAFYKYIQAFGFGTPTGIELPGEASGMILPKSKIYPVDLATMSFG QGIAVTPIQMITAFSAVINGGNLMVPHIVKYIENGDKKIKEYKPQIVRQVISKKTSDTMRHILEKTVTEGTGQAAKVPGY TVGGKTGTTENYAPGKYVASFAGFAPVENPKIAVLVLVKNPTQNGHMGGEVAAPIAQEILRDTLRYYDTVKK
Specific function: Penicillin-binding protein with an unknown catalytic activity. May have a specialized role in the morphogenesis of spore cortex, which is a modified form of peptidoglycan. Pore cortex formation is determined primarily by the mother cell [H]
COG id: COG0768
COG function: function code M; Cell division protein FtsI/penicillin-binding protein 2
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PASTA domain [H]
Homologues:
Organism=Escherichia coli, GI1786272, Length=550, Percent_Identity=28.7272727272727, Blast_Score=222, Evalue=4e-59, Organism=Escherichia coli, GI1786854, Length=615, Percent_Identity=25.0406504065041, Blast_Score=155, Evalue=9e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR005543 - InterPro: IPR005311 - InterPro: IPR001460 - InterPro: IPR011927 [H]
Pfam domain/function: PF03793 PASTA; PF03717 PBP_dimer; PF00905 Transpeptidase [H]
EC number: NA
Molecular weight: Translated: 61084; Mature: 60953
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSYVKKRTFTIFIFFTIMIFALIVRLIWIQGINSEKLAMAVERQSTADIILKPQRGNIY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEHHCCCCCCEEEECCCCCEE DVNGNILACNVPAGDVFAAPKFIKNPEKASEELYKYLNMDKDSLYKILSNKNSEWAVLGR ECCCCEEEEECCCCCHHCCCHHHCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEEC SIPLENINKIKSLNIPGIYVEDTFMRNYPNDKMLSQVLGFAGIDGNGLYGLEYSLDKYLG CCCHHHHHHHHCCCCCEEEEECHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEEHHHHHC GVPGREISLVDREGRKVGVPKFYKEPTNGDNIVLTIDSVIQSYTEKAIKKAYEKYKPEDG CCCCCEEEEEECCCCEECCCHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCC ITAIVMNPKTGEILAMANLPDFDPNNWQNVPSKEYWSNPAVSSTYEPASVFKVITASAAL CEEEEECCCCCCEEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHH ESAVVTPDEKFYDPGYYIVSGKKIRSWKALGDITFSQAIEKSSNTVFVQVVERLGVDAFY HHHCCCCCHHHCCCCEEEEECCEEECHHHHHCHHHHHHHHCCCCEEHHHHHHHHCHHHHH KYIQAFGFGTPTGIELPGEASGMILPKSKIYPVDLATMSFGQGIAVTPIQMITAFSAVIN HHHHHHCCCCCCCCCCCCCCCCEEECCCCCCEEEEHHHCCCCCCEECHHHHHHHHHHHHC GGNLMVPHIVKYIENGDKKIKEYKPQIVRQVISKKTSDTMRHILEKTVTEGTGQAAKVPG CCCEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCC YTVGGKTGTTENYAPGKYVASFAGFAPVENPKIAVLVLVKNPTQNGHMGGEVAAPIAQEI EEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHH LRDTLRYYDTVKK HHHHHHHHHHHCC >Mature Secondary Structure TSYVKKRTFTIFIFFTIMIFALIVRLIWIQGINSEKLAMAVERQSTADIILKPQRGNIY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEHHCCCCCCEEEECCCCCEE DVNGNILACNVPAGDVFAAPKFIKNPEKASEELYKYLNMDKDSLYKILSNKNSEWAVLGR ECCCCEEEEECCCCCHHCCCHHHCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEEC SIPLENINKIKSLNIPGIYVEDTFMRNYPNDKMLSQVLGFAGIDGNGLYGLEYSLDKYLG CCCHHHHHHHHCCCCCEEEEECHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEEHHHHHC GVPGREISLVDREGRKVGVPKFYKEPTNGDNIVLTIDSVIQSYTEKAIKKAYEKYKPEDG CCCCCEEEEEECCCCEECCCHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCC ITAIVMNPKTGEILAMANLPDFDPNNWQNVPSKEYWSNPAVSSTYEPASVFKVITASAAL CEEEEECCCCCCEEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHH ESAVVTPDEKFYDPGYYIVSGKKIRSWKALGDITFSQAIEKSSNTVFVQVVERLGVDAFY HHHCCCCCHHHCCCCEEEEECCEEECHHHHHCHHHHHHHHCCCCEEHHHHHHHHCHHHHH KYIQAFGFGTPTGIELPGEASGMILPKSKIYPVDLATMSFGQGIAVTPIQMITAFSAVIN HHHHHHCCCCCCCCCCCCCCCCEEECCCCCCEEEEHHHCCCCCCEECHHHHHHHHHHHHC GGNLMVPHIVKYIENGDKKIKEYKPQIVRQVISKKTSDTMRHILEKTVTEGTGQAAKVPG CCCEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCC YTVGGKTGTTENYAPGKYVASFAGFAPVENPKIAVLVLVKNPTQNGHMGGEVAAPIAQEI EEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHH LRDTLRYYDTVKK HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8289242; 9384377; 8244929; 8436954 [H]