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The map label for this gene is swrAB [H]

Identifier: 167039700

GI number: 167039700

Start: 1083762

End: 1085006

Strand: Direct

Name: swrAB [H]

Synonym: Teth514_1050

Alternate gene names: 167039700

Gene position: 1083762-1085006 (Clockwise)

Preceding gene: 167039699

Following gene: 167039701

Centisome position: 44.1

GC content: 34.38

Gene sequence:

>1245_bases
ATGACAGCTTTTATTAAAGTTTTTTGGTGGGCAATAGAGACGATAGCTTTATCAGTTTTTAATCCCTTTTTCTGGATAGT
GATAATTCTGATAGTAATGCAGTATAGAAACAAAATAGCCATAGAAAGGGAAATTATGGGACAGGAGCAAGAACCAATGA
AAGAATTGGTTCTTGACTCTGTCTTTTATGGTGTAATTGCTGCAATAATTGGGAGCTTTCTCATGATATTTTTAGGAATA
ACAATAGAAAATATAGGGCTTCAGTATGTATGGCCTTTGGTCATAGTATTGATGCTTGTCAATCCTAGATATATTTGTTT
TTCTTATGCAGGAGGAATAGTTTCTCTATTCAGCTTGTTTTTTGGATTTCCTAATATAAGTGTGCCTGCCCTTATGTCTA
TTGTAGGTATTCTTCATTTGATGGAAAGCCTTTTAATATATATAGATGGTCCAAGGAATGCCACTCCTATCTTTGTAAGG
CTTAAGGATGGGCGAGTGGCAGGAGGCTTTACTATGCAAAAGTTTTGGCCTATTCCTTTTGCTGCATTAACTATTGCTAC
TGGGATAACAATAACGGGACAGGGTGTAAATATGCCAGATTGGTGGCCCATCATCAAACCCTCTGGCATTGATTTAAATA
ATGTAATTTTTTTGATGATGCCAGCAATTGCAGCTTTGGGATATGGAGATTTAGCTTTAACTCAACTTCCAGAGAAGAAA
ACGCGCATTTCTTCGCTGCGTTTATTTTGCTTTAGCATAGTTTTAATTATATTAGCAGTATTAGGAATCTATATTAAATT
ATTTCAATATTTGGCAGCTATTTTTGCTCCAGTAGCTCATGAGCTTTTGATTTTGATAGGACAAAGAGAAGAAAGGGAAA
ATCCACCTCTTTTTGTAGCGCCAGATACAGGAGTGATGATTTTAGCGACAGCAAAAGGTTCTCCCGCTAGAGAAATGGGA
ATTAAACCGGGGGATGTAATATTAAAAATTAATGATATTCCTATTAATGAGCCAGATGATATAATACGAATACTCAATGA
ACGGCCTTCTGTGATGTGGATCACTGTAAAAGATTTAAATGGCAATTATACTAACTATGAATATAAGGATCCACAGGGAA
TTTTGGGATTAGGAGTTTTAATAGTGCCAAAGGCAACTTCTATGATTTATGAAATTAATGGGGAAGGAATATTTATAAAA
AAATTAAAAGAAATCTTTAAAAACATTTTTAAGAAAAACAGATAA

Upstream 100 bases:

>100_bases
TGAAAGTTACACTCTTCAAGATACTCCTGACTTAAAAGGAGATACTCAGCTTATAAAAGCTTTTGAAATTGTAAAAAGTG
AGATAAAGTAGGGTGTTAAA

Downstream 100 bases:

>100_bases
GGAGGCAGGGTGAGTGTTTTTACAAACTTTTGAAACATATAATTCTTTTAATGAAAGAGAGTTAAAAAATAAAAACGTCG
TTGTAATAGATACCCTACGA

Product: PDZ/DHR/GLGF domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 413

Protein sequence:

>414_residues
MTAFIKVFWWAIETIALSVFNPFFWIVIILIVMQYRNKIAIEREIMGQEQEPMKELVLDSVFYGVIAAIIGSFLMIFLGI
TIENIGLQYVWPLVIVLMLVNPRYICFSYAGGIVSLFSLFFGFPNISVPALMSIVGILHLMESLLIYIDGPRNATPIFVR
LKDGRVAGGFTMQKFWPIPFAALTIATGITITGQGVNMPDWWPIIKPSGIDLNNVIFLMMPAIAALGYGDLALTQLPEKK
TRISSLRLFCFSIVLIILAVLGIYIKLFQYLAAIFAPVAHELLILIGQREERENPPLFVAPDTGVMILATAKGSPAREMG
IKPGDVILKINDIPINEPDDIIRILNERPSVMWITVKDLNGNYTNYEYKDPQGILGLGVLIVPKATSMIYEINGEGIFIK
KLKEIFKNIFKKNR

Sequences:

>Translated_414_residues
MTAFIKVFWWAIETIALSVFNPFFWIVIILIVMQYRNKIAIEREIMGQEQEPMKELVLDSVFYGVIAAIIGSFLMIFLGI
TIENIGLQYVWPLVIVLMLVNPRYICFSYAGGIVSLFSLFFGFPNISVPALMSIVGILHLMESLLIYIDGPRNATPIFVR
LKDGRVAGGFTMQKFWPIPFAALTIATGITITGQGVNMPDWWPIIKPSGIDLNNVIFLMMPAIAALGYGDLALTQLPEKK
TRISSLRLFCFSIVLIILAVLGIYIKLFQYLAAIFAPVAHELLILIGQREERENPPLFVAPDTGVMILATAKGSPAREMG
IKPGDVILKINDIPINEPDDIIRILNERPSVMWITVKDLNGNYTNYEYKDPQGILGLGVLIVPKATSMIYEINGEGIFIK
KLKEIFKNIFKKNR
>Mature_413_residues
TAFIKVFWWAIETIALSVFNPFFWIVIILIVMQYRNKIAIEREIMGQEQEPMKELVLDSVFYGVIAAIIGSFLMIFLGIT
IENIGLQYVWPLVIVLMLVNPRYICFSYAGGIVSLFSLFFGFPNISVPALMSIVGILHLMESLLIYIDGPRNATPIFVRL
KDGRVAGGFTMQKFWPIPFAALTIATGITITGQGVNMPDWWPIIKPSGIDLNNVIFLMMPAIAALGYGDLALTQLPEKKT
RISSLRLFCFSIVLIILAVLGIYIKLFQYLAAIFAPVAHELLILIGQREERENPPLFVAPDTGVMILATAKGSPAREMGI
KPGDVILKINDIPINEPDDIIRILNERPSVMWITVKDLNGNYTNYEYKDPQGILGLGVLIVPKATSMIYEINGEGIFIKK
LKEIFKNIFKKNR

Specific function: Required for surface-adhering cells to differentiate into hyperflagellated and elongated swarm cells [H]

COG id: COG0265

COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46436; Mature: 46305

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAFIKVFWWAIETIALSVFNPFFWIVIILIVMQYRNKIAIEREIMGQEQEPMKELVLDS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
VFYGVIAAIIGSFLMIFLGITIENIGLQYVWPLVIVLMLVNPRYICFSYAGGIVSLFSLF
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHH
FGFPNISVPALMSIVGILHLMESLLIYIDGPRNATPIFVRLKDGRVAGGFTMQKFWPIPF
HCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEEEEECCEEECCEEHHHCCCCCH
AALTIATGITITGQGVNMPDWWPIIKPSGIDLNNVIFLMMPAIAALGYGDLALTQLPEKK
HHHHHHCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHCCCCHH
TRISSLRLFCFSIVLIILAVLGIYIKLFQYLAAIFAPVAHELLILIGQREERENPPLFVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE
PDTGVMILATAKGSPAREMGIKPGDVILKINDIPINEPDDIIRILNERPSVMWITVKDLN
CCCCEEEEEECCCCCHHHHCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCEEEEEEEECC
GNYTNYEYKDPQGILGLGVLIVPKATSMIYEINGEGIFIKKLKEIFKNIFKKNR
CCCCCCCCCCCCCCEEECEEEEECCCEEEEEECCCEEEHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TAFIKVFWWAIETIALSVFNPFFWIVIILIVMQYRNKIAIEREIMGQEQEPMKELVLDS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
VFYGVIAAIIGSFLMIFLGITIENIGLQYVWPLVIVLMLVNPRYICFSYAGGIVSLFSLF
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHH
FGFPNISVPALMSIVGILHLMESLLIYIDGPRNATPIFVRLKDGRVAGGFTMQKFWPIPF
HCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEEEEECCEEECCEEHHHCCCCCH
AALTIATGITITGQGVNMPDWWPIIKPSGIDLNNVIFLMMPAIAALGYGDLALTQLPEKK
HHHHHHCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHCCCCHH
TRISSLRLFCFSIVLIILAVLGIYIKLFQYLAAIFAPVAHELLILIGQREERENPPLFVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE
PDTGVMILATAKGSPAREMGIKPGDVILKINDIPINEPDDIIRILNERPSVMWITVKDLN
CCCCEEEEEECCCCCHHHHCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCEEEEEEEECC
GNYTNYEYKDPQGILGLGVLIVPKATSMIYEINGEGIFIKKLKEIFKNIFKKNR
CCCCCCCCCCCCCCEEECEEEEECCCEEEEEECCCEEEHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]