| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is 167039635
Identifier: 167039635
GI number: 167039635
Start: 1012980
End: 1014368
Strand: Direct
Name: 167039635
Synonym: Teth514_0983
Alternate gene names: NA
Gene position: 1012980-1014368 (Clockwise)
Preceding gene: 167039634
Following gene: 167039636
Centisome position: 41.22
GC content: 34.41
Gene sequence:
>1389_bases ATGAATAATATAAGGCTAAAGTACGGGACTAATGCTTTTATAATGACAGCTCTTTTACTGGCTATTTTAATATTGGCAAA TGTTATAGTCACGCAAAAGCCTGTCAAGTGGGATTTGACTAAAAACAAGCAATATACCCTTTCTGACCAAACAAAACAAG TTTTGAAAAGTCTAAAAACAGATGTAACTGTCTATGCCTTTTTCAAAGAGGGTACTACTTCAAGAGACATGGTAAAAAGT TTGTTAGATCAATACAGAAATGTTTCAAAGAGAATAATTGTCCATTTTGTAGACCCAGATAAGGAGCCGGCAACTGCTCA AAGATATGGAATTACGGATTATGACACAGTGCTTTTTATTGCAGGAAGTGGTGCTAATGAAAAAAGACAGATAGTAAATT CTTATGATATTTTTGGCATGGGTAGTCAGCCTAATACTGCTACTTTTAATGGAGAAGAACAGTTTACACAGGCTATAATT GATGTTACACAGCCTAAAAAATTAAATGCGTATATTCTTCAAGGACATGATGAATTAAACAGTATTGACTATTTGGTGAC TTTTAAAAACGCTTTGAGAGGAGAAGGATATAATGTAGAAGATTTAAATATAGGACAGGCAGGAGGAATACCAAAAAATA CAGACTTATTAGTTATTGTTAACCCAAGAAGAGACTTTACTGACAAGGAAATGGCTGCTTTAAAAGAATACTTTGACAAA GGCGGAAAAGCAATCATTGCAATGGGGGCAGAATATGGGCCTTTGACTCAAAAATCTGTAAATGAGCTTTTGTCTACTTG GGGTGTAAAATTTGACAATGACGTTGTAGTAGATCCAGGAAGGAATTATTTTATGGACCCGCTTTCTCCAGTTCCTCAGT ACAAATTTCATACTATAACTAATAAATTGGATTTATCAAACTTGTACGTTGTAATGCCAATGTCAAGAAGTATTTCTTAT CCTGATAAACCAACAGAAAATATAACTATAGAGCAATTGCTTTCAACCAGTGATAAAGCTTGGGGTAAAACCGATTTTAA CTCAAAAGATGCTAATTTTCAAAAAGGTGATATCAAAGGTCCTTTAAGCTTAGGCTTAGCTATATCCGATTCAAAGACAG GAATGAAGATTGTAGCTATTGGAAGTAGCATGATGTTTACTGATAAAATAATTACATTGGAAGCTAATAGAGACTTTTTA ATGAACAGTGCTAACTGGTTAGCGGATAAGACAACACAGATTTCTATACGTCCCAAATCCCTTGAGTTTAATCAGATTTT CCTAACCGGCAAACAAGCTGCTATGCTTTTTTATACCACAGTTGTAATTATTCCACTGGTGATGTGGATAATTGGAGGAT ACATGTGGTATAGGAGGAAGACATTATGA
Upstream 100 bases:
>100_bases ATTTAAGTGATGTAGTCTTTTTCATAAGTGTAATTATATTCTTTATTTTCTTGACAATTCGTGTTGTAGACAAAAGACGT TGGAGTTAGGAGGAGAAAAG
Downstream 100 bases:
>100_bases AGATTTTTAAAACCACTATTGTTTTGCTGGTAATATTCGCTGTTCTTTTTGGCTACTATTTTTATGAAAGTAAGACCAAT AAACCTGTTAAAGAAGACAA
Product: gliding motility ABC transporter auxiliary component-like protein
Products: NA
Alternate protein names: ABC Transporter; ABC Transporter-Like Protein; ABC-Type Transporter; ABC-Type Transport System Involved In Gliding Motility
Number of amino acids: Translated: 462; Mature: 462
Protein sequence:
>462_residues MNNIRLKYGTNAFIMTALLLAILILANVIVTQKPVKWDLTKNKQYTLSDQTKQVLKSLKTDVTVYAFFKEGTTSRDMVKS LLDQYRNVSKRIIVHFVDPDKEPATAQRYGITDYDTVLFIAGSGANEKRQIVNSYDIFGMGSQPNTATFNGEEQFTQAII DVTQPKKLNAYILQGHDELNSIDYLVTFKNALRGEGYNVEDLNIGQAGGIPKNTDLLVIVNPRRDFTDKEMAALKEYFDK GGKAIIAMGAEYGPLTQKSVNELLSTWGVKFDNDVVVDPGRNYFMDPLSPVPQYKFHTITNKLDLSNLYVVMPMSRSISY PDKPTENITIEQLLSTSDKAWGKTDFNSKDANFQKGDIKGPLSLGLAISDSKTGMKIVAIGSSMMFTDKIITLEANRDFL MNSANWLADKTTQISIRPKSLEFNQIFLTGKQAAMLFYTTVVIIPLVMWIIGGYMWYRRKTL
Sequences:
>Translated_462_residues MNNIRLKYGTNAFIMTALLLAILILANVIVTQKPVKWDLTKNKQYTLSDQTKQVLKSLKTDVTVYAFFKEGTTSRDMVKS LLDQYRNVSKRIIVHFVDPDKEPATAQRYGITDYDTVLFIAGSGANEKRQIVNSYDIFGMGSQPNTATFNGEEQFTQAII DVTQPKKLNAYILQGHDELNSIDYLVTFKNALRGEGYNVEDLNIGQAGGIPKNTDLLVIVNPRRDFTDKEMAALKEYFDK GGKAIIAMGAEYGPLTQKSVNELLSTWGVKFDNDVVVDPGRNYFMDPLSPVPQYKFHTITNKLDLSNLYVVMPMSRSISY PDKPTENITIEQLLSTSDKAWGKTDFNSKDANFQKGDIKGPLSLGLAISDSKTGMKIVAIGSSMMFTDKIITLEANRDFL MNSANWLADKTTQISIRPKSLEFNQIFLTGKQAAMLFYTTVVIIPLVMWIIGGYMWYRRKTL >Mature_462_residues MNNIRLKYGTNAFIMTALLLAILILANVIVTQKPVKWDLTKNKQYTLSDQTKQVLKSLKTDVTVYAFFKEGTTSRDMVKS LLDQYRNVSKRIIVHFVDPDKEPATAQRYGITDYDTVLFIAGSGANEKRQIVNSYDIFGMGSQPNTATFNGEEQFTQAII DVTQPKKLNAYILQGHDELNSIDYLVTFKNALRGEGYNVEDLNIGQAGGIPKNTDLLVIVNPRRDFTDKEMAALKEYFDK GGKAIIAMGAEYGPLTQKSVNELLSTWGVKFDNDVVVDPGRNYFMDPLSPVPQYKFHTITNKLDLSNLYVVMPMSRSISY PDKPTENITIEQLLSTSDKAWGKTDFNSKDANFQKGDIKGPLSLGLAISDSKTGMKIVAIGSSMMFTDKIITLEANRDFL MNSANWLADKTTQISIRPKSLEFNQIFLTGKQAAMLFYTTVVIIPLVMWIIGGYMWYRRKTL
Specific function: Unknown
COG id: COG3225
COG function: function code N; ABC-type uncharacterized transport system involved in gliding motility, auxiliary component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51970; Mature: 51970
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNIRLKYGTNAFIMTALLLAILILANVIVTQKPVKWDLTKNKQYTLSDQTKQVLKSLKT CCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEECHHHHHHHHHHCC DVTVYAFFKEGTTSRDMVKSLLDQYRNVSKRIIVHFVDPDKEPATAQRYGITDYDTVLFI CEEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHCCCCCCCEEEEE AGSGANEKRQIVNSYDIFGMGSQPNTATFNGEEQFTQAIIDVTQPKKLNAYILQGHDELN ECCCCCHHHHHHCCCCEEEECCCCCCEEECCHHHHHHHHHHCCCCCCCCEEEEECCCCCC SIDYLVTFKNALRGEGYNVEDLNIGQAGGIPKNTDLLVIVNPRRDFTDKEMAALKEYFDK CEEEEEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHC GGKAIIAMGAEYGPLTQKSVNELLSTWGVKFDNDVVVDPGRNYFMDPLSPVPQYKFHTIT CCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEC NKLDLSNLYVVMPMSRSISYPDKPTENITIEQLLSTSDKAWGKTDFNSKDANFQKGDIKG CEEECCCEEEEEECCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC PLSLGLAISDSKTGMKIVAIGSSMMFTDKIITLEANRDFLMNSANWLADKTTQISIRPKS CEEEEEEEECCCCCEEEEEECCCEEEEEEEEEEECCCCEEECCCCCCCCCCEEEEEECCC LEFNQIFLTGKQAAMLFYTTVVIIPLVMWIIGGYMWYRRKTL CEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNNIRLKYGTNAFIMTALLLAILILANVIVTQKPVKWDLTKNKQYTLSDQTKQVLKSLKT CCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEECHHHHHHHHHHCC DVTVYAFFKEGTTSRDMVKSLLDQYRNVSKRIIVHFVDPDKEPATAQRYGITDYDTVLFI CEEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHCCCCCCCEEEEE AGSGANEKRQIVNSYDIFGMGSQPNTATFNGEEQFTQAIIDVTQPKKLNAYILQGHDELN ECCCCCHHHHHHCCCCEEEECCCCCCEEECCHHHHHHHHHHCCCCCCCCEEEEECCCCCC SIDYLVTFKNALRGEGYNVEDLNIGQAGGIPKNTDLLVIVNPRRDFTDKEMAALKEYFDK CEEEEEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHC GGKAIIAMGAEYGPLTQKSVNELLSTWGVKFDNDVVVDPGRNYFMDPLSPVPQYKFHTIT CCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEC NKLDLSNLYVVMPMSRSISYPDKPTENITIEQLLSTSDKAWGKTDFNSKDANFQKGDIKG CEEECCCEEEEEECCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC PLSLGLAISDSKTGMKIVAIGSSMMFTDKIITLEANRDFLMNSANWLADKTTQISIRPKS CEEEEEEEECCCCCEEEEEECCCEEEEEEEEEEECCCCEEECCCCCCCCCCEEEEEECCC LEFNQIFLTGKQAAMLFYTTVVIIPLVMWIIGGYMWYRRKTL CEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA