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The map label for this gene is ykoV [H]

Identifier: 167039605

GI number: 167039605

Start: 975558

End: 976370

Strand: Reverse

Name: ykoV [H]

Synonym: Teth514_0953

Alternate gene names: 167039605

Gene position: 976370-975558 (Counterclockwise)

Preceding gene: 167039607

Following gene: 167039604

Centisome position: 39.73

GC content: 34.81

Gene sequence:

>813_bases
ATGCGCTCAATGTGGAAAGGAGCAATAAGTTTTGGTCTTGTAAGTATCCCCATAAAACTGTATACCGCTACAGAAGACCA
TGCCATACATTTTAGGCAACTTCACAAAGAATGTAAATCCCCCATAAAATACGAAAAAATTTGCCCTGTATGTAATAGAC
CCGTTTCAGATGAGGAAATAGTACGAGGATATGAATACGAACCAGGTAAATTTGTCATTATAGATGATGAAGATTTGGAA
AGGATACCTATGCCAACAGTTAAAACCATTGATATAGTAGATTTTACCGATATAGGACAAATAGACCCCATATATTATGA
CAAAACATATTTCATTGTACCCGAAGATATTGGTACAAAACCTTATGTACTTTTAAGAGATTCTATGAAAGAAACAAAAC
GAGTTGCAATAGCGAAAGTGGTAATTAGGTCCAAGCAAAACCTCGCATGCATACGAGTGTATGAGGAAAAATACCTGGTC
ATGGAAACAATGCATTTTCCTGATGAAATAAAAAACACAAACCAGCTTCCTCCCTTAAGAGAAGTCAGCTTGCATGAAAA
TGAAATAAAAATGGCCAAACAACTTATTGATACTTTGACCTCCGATTTTAAACCCGAAAAATATGATGATAGCTACAGAA
AAACGTTAATTGAAATGATTGAGTCAAAGATACAGGACAAAGATATAGAAATTCCCCAAAAAGCACCTGAAGCCGATAAT
GTTCTTGATTTAGTAAGTGCACTAAAAGCAAGCATTGAATCTGTAAAGAATGAAGAAAAAGCAAAAAAAGGACACAAAAG
AAAAGGCGCATAA

Upstream 100 bases:

>100_bases
ATTTCAATAAATATATATATCCATATATACCAATTTATATATATGTTTTTATAAATAAAAAGTTTCTTAATGGAAATATT
AAATATGAGGTGATTTAAAA

Downstream 100 bases:

>100_bases
AGGAAGATTGAATATGTCTATGATAGAAGAAAAAATATCACCTATGCTGGCATCCAGTAGTGACCCTTTTGATAGCCCCG
AATGGATATATGAAATCAAA

Product: Ku domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MRSMWKGAISFGLVSIPIKLYTATEDHAIHFRQLHKECKSPIKYEKICPVCNRPVSDEEIVRGYEYEPGKFVIIDDEDLE
RIPMPTVKTIDIVDFTDIGQIDPIYYDKTYFIVPEDIGTKPYVLLRDSMKETKRVAIAKVVIRSKQNLACIRVYEEKYLV
METMHFPDEIKNTNQLPPLREVSLHENEIKMAKQLIDTLTSDFKPEKYDDSYRKTLIEMIESKIQDKDIEIPQKAPEADN
VLDLVSALKASIESVKNEEKAKKGHKRKGA

Sequences:

>Translated_270_residues
MRSMWKGAISFGLVSIPIKLYTATEDHAIHFRQLHKECKSPIKYEKICPVCNRPVSDEEIVRGYEYEPGKFVIIDDEDLE
RIPMPTVKTIDIVDFTDIGQIDPIYYDKTYFIVPEDIGTKPYVLLRDSMKETKRVAIAKVVIRSKQNLACIRVYEEKYLV
METMHFPDEIKNTNQLPPLREVSLHENEIKMAKQLIDTLTSDFKPEKYDDSYRKTLIEMIESKIQDKDIEIPQKAPEADN
VLDLVSALKASIESVKNEEKAKKGHKRKGA
>Mature_270_residues
MRSMWKGAISFGLVSIPIKLYTATEDHAIHFRQLHKECKSPIKYEKICPVCNRPVSDEEIVRGYEYEPGKFVIIDDEDLE
RIPMPTVKTIDIVDFTDIGQIDPIYYDKTYFIVPEDIGTKPYVLLRDSMKETKRVAIAKVVIRSKQNLACIRVYEEKYLV
METMHFPDEIKNTNQLPPLREVSLHENEIKMAKQLIDTLTSDFKPEKYDDSYRKTLIEMIESKIQDKDIEIPQKAPEADN
VLDLVSALKASIESVKNEEKAKKGHKRKGA

Specific function: Could be involved in DNA repair during spore germination [H]

COG id: COG1273

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Spore core. Note=Expressed in the center of the spore core, presumably with the nucleoid [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Ku domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006164
- InterPro:   IPR009187
- InterPro:   IPR016194 [H]

Pfam domain/function: PF02735 Ku [H]

EC number: NA

Molecular weight: Translated: 31253; Mature: 31253

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSMWKGAISFGLVSIPIKLYTATEDHAIHFRQLHKECKSPIKYEKICPVCNRPVSDEEI
CCCHHHHHHHHHHEEEEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHCHHHCCCCCHHHH
VRGYEYEPGKFVIIDDEDLERIPMPTVKTIDIVDFTDIGQIDPIYYDKTYFIVPEDIGTK
HCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCEEECCEEEEECCCCCCC
PYVLLRDSMKETKRVAIAKVVIRSKQNLACIRVYEEKYLVMETMHFPDEIKNTNQLPPLR
CEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHCCCHHHCCCCCCCCCH
EVSLHENEIKMAKQLIDTLTSDFKPEKYDDSYRKTLIEMIESKIQDKDIEIPQKAPEADN
HHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
VLDLVSALKASIESVKNEEKAKKGHKRKGA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRSMWKGAISFGLVSIPIKLYTATEDHAIHFRQLHKECKSPIKYEKICPVCNRPVSDEEI
CCCHHHHHHHHHHEEEEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHCHHHCCCCCHHHH
VRGYEYEPGKFVIIDDEDLERIPMPTVKTIDIVDFTDIGQIDPIYYDKTYFIVPEDIGTK
HCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCEEECCEEEEECCCCCCC
PYVLLRDSMKETKRVAIAKVVIRSKQNLACIRVYEEKYLVMETMHFPDEIKNTNQLPPLR
CEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHCCCHHHCCCCCCCCCH
EVSLHENEIKMAKQLIDTLTSDFKPEKYDDSYRKTLIEMIESKIQDKDIEIPQKAPEADN
HHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
VLDLVSALKASIESVKNEEKAKKGHKRKGA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]