| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is ybbP [H]
Identifier: 167039586
GI number: 167039586
Start: 956485
End: 957318
Strand: Direct
Name: ybbP [H]
Synonym: Teth514_0934
Alternate gene names: 167039586
Gene position: 956485-957318 (Clockwise)
Preceding gene: 167039585
Following gene: 167039587
Centisome position: 38.92
GC content: 37.05
Gene sequence:
>834_bases TTGTTTAATGGACTTATAGATATCATAAAAACAATGCGAATTAACGATGTAATAGATATTTTAATAATAGCTTATGTCCT GTACCGCTTAATTTTGGTAATACACAAAACACGAGTAGAGCAGTTGCTTAAAGGGCTTGCTGTGTTAATTGTAATTACCA AAGTGAGCGAATGGCTACAAATTAGGACAGTCAATTATATATTGCGAAATGCTATGACTGTAGGAGTTATTGCGCTTTTA ATTGTTTTTCAGCCGGAGTTAAGGCGTGGATTAGAGTCTTTAGGTAGGAGCGGGTTCTTAGGCAAAAATTTCTTCTTTTT TAATGAAGAGGAAAAAGATATGTCAGAGGTTTTGGGAGAGATATGCGATGCGGTGCAATTTTTGTCCCGCTCAAAAATAG GGGCTTTAATTGTTTTAGAAAGGGAGACAGGCCTTAATGAGCTCATTGAAACTGGCATAGCCATGGATTCTAAAATTTCC AGTGAGCTTTTAATAAATACCTTTATACCAAATACGCCCTTACACGATGGAGCTGTCATAATTCGTAGAGATAGGATTAT GGCGGCAGGTTGTTTTTTACCTTTAACAGACAACCAAAATCTAAGTAGTGAATTAGGAACACGCCATAGAGCGGGAATAG GTGTTACTGAAATATCTGATGCGGTAGCGATAATCGTTTCTGAAGAGACAGGCACTATTTCTCTTGCACAAAATGGCAGG ATTTCAAGACATTTAGATGCAAAAACTTTAAAAGAGGTGTTGTCGAGCATATTTGAAGTAAAAGATACCAAAAAGCCCGT ATGGAAAAAATGGGGGAACAAACATGCTGACTAA
Upstream 100 bases:
>100_bases TAATTAAAATTTAATTCAGTTTAAATTATTTTTTATTCAAATTTGTTGTATAATTAATATGTACACACAATTTACCACAA AGCCTTGAGAGGTGAATTTT
Downstream 100 bases:
>100_bases AGATTTTACAATAAAATTGCTGTCACTGGTATTGGCTTTTTTACTGTGGCTTTATGTAATGGGAGAAGAAAATCCAGAAA TTCCTTATGAAATAAGCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MFNGLIDIIKTMRINDVIDILIIAYVLYRLILVIHKTRVEQLLKGLAVLIVITKVSEWLQIRTVNYILRNAMTVGVIALL IVFQPELRRGLESLGRSGFLGKNFFFFNEEEKDMSEVLGEICDAVQFLSRSKIGALIVLERETGLNELIETGIAMDSKIS SELLINTFIPNTPLHDGAVIIRRDRIMAAGCFLPLTDNQNLSSELGTRHRAGIGVTEISDAVAIIVSEETGTISLAQNGR ISRHLDAKTLKEVLSSIFEVKDTKKPVWKKWGNKHAD
Sequences:
>Translated_277_residues MFNGLIDIIKTMRINDVIDILIIAYVLYRLILVIHKTRVEQLLKGLAVLIVITKVSEWLQIRTVNYILRNAMTVGVIALL IVFQPELRRGLESLGRSGFLGKNFFFFNEEEKDMSEVLGEICDAVQFLSRSKIGALIVLERETGLNELIETGIAMDSKIS SELLINTFIPNTPLHDGAVIIRRDRIMAAGCFLPLTDNQNLSSELGTRHRAGIGVTEISDAVAIIVSEETGTISLAQNGR ISRHLDAKTLKEVLSSIFEVKDTKKPVWKKWGNKHAD >Mature_277_residues MFNGLIDIIKTMRINDVIDILIIAYVLYRLILVIHKTRVEQLLKGLAVLIVITKVSEWLQIRTVNYILRNAMTVGVIALL IVFQPELRRGLESLGRSGFLGKNFFFFNEEEKDMSEVLGEICDAVQFLSRSKIGALIVLERETGLNELIETGIAMDSKIS SELLINTFIPNTPLHDGAVIIRRDRIMAAGCFLPLTDNQNLSSELGTRHRAGIGVTEISDAVAIIVSEETGTISLAQNGR ISRHLDAKTLKEVLSSIFEVKDTKKPVWKKWGNKHAD
Specific function: Unknown
COG id: COG1624
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014046 - InterPro: IPR003390 [H]
Pfam domain/function: PF02457 DisA_N [H]
EC number: NA
Molecular weight: Translated: 30983; Mature: 30983
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNGLIDIIKTMRINDVIDILIIAYVLYRLILVIHKTRVEQLLKGLAVLIVITKVSEWLQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IRTVNYILRNAMTVGVIALLIVFQPELRRGLESLGRSGFLGKNFFFFNEEEKDMSEVLGE HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHH ICDAVQFLSRSKIGALIVLERETGLNELIETGIAMDSKISSELLINTFIPNTPLHDGAVI HHHHHHHHHHCCCCEEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEEE IRRDRIMAAGCFLPLTDNQNLSSELGTRHRAGIGVTEISDAVAIIVSEETGTISLAQNGR EEECCEEEECEEEECCCCCCCHHHHCCHHHCCCCHHHHCCEEEEEEECCCCEEEEECCCC ISRHLDAKTLKEVLSSIFEVKDTKKPVWKKWGNKHAD CHHCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCC >Mature Secondary Structure MFNGLIDIIKTMRINDVIDILIIAYVLYRLILVIHKTRVEQLLKGLAVLIVITKVSEWLQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IRTVNYILRNAMTVGVIALLIVFQPELRRGLESLGRSGFLGKNFFFFNEEEKDMSEVLGE HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHH ICDAVQFLSRSKIGALIVLERETGLNELIETGIAMDSKISSELLINTFIPNTPLHDGAVI HHHHHHHHHHCCCCEEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEEE IRRDRIMAAGCFLPLTDNQNLSSELGTRHRAGIGVTEISDAVAIIVSEETGTISLAQNGR EEECCEEEECEEEECCCCCCCHHHHCCHHHCCCCHHHHCCEEEEEEECCCCEEEEECCCC ISRHLDAKTLKEVLSSIFEVKDTKKPVWKKWGNKHAD CHHCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9274029; 9384377 [H]