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The map label for this gene is gcdC [H]

Identifier: 167039453

GI number: 167039453

Start: 833187

End: 833585

Strand: Direct

Name: gcdC [H]

Synonym: Teth514_0799

Alternate gene names: 167039453

Gene position: 833187-833585 (Clockwise)

Preceding gene: 167039452

Following gene: 167039454

Centisome position: 33.91

GC content: 38.6

Gene sequence:

>399_bases
GTGAAGAAGTTTAAAGTAACAGTAAATGGAAAAGTATATGAGGTTGAAGTAGAAGAGATAAAAGATAAGGATGAAATTTC
AAACATAATACAAACGGCAACTGTTTCACAGCCTAAAGTGACTGCAACTCAGGCGACTTTCCAGCCAGTTTCAAAAGCTG
AAGCGCCTTCTTCGGCAGATAAAGGTTCTAAAATAATTTCTGCCCCTATGCCAGGCACAATTCTTGATGTGAAAGTTAAA
GAAGGTGACAGGGTAAAGCGGGGAGATGTGGTAGTAATTTTAGAGGCTATGAAAATGGAAAATGAAATAATGGCACCTGA
AGAAGGAGTTATAGCAAGCATACATGTTTCTAAAGGCTCTTCCGTAAACACAGGGGATGTGCTTGTGACTATGAATTAA

Upstream 100 bases:

>100_bases
TAAAGTCTATAGTGAGACTTCCAGAGACTGCTCCTGTTTGGGCTAAAGTAGGGCGGCAGGAGCAAATGAGAACAAGATTG
TAACTGATGGAGGGATTTCT

Downstream 100 bases:

>100_bases
AAAATTATTGATGAGTAAGACTTTTTTTGGTAAAATAAAATTGCGGGTATCGTCTTTGAACCTGACACGATAATTAAATA
ATTAAATGGAGTTCGGAACG

Product: biotin/lipoyl attachment domain-containing protein

Products: NA

Alternate protein names: Biotin carrier [H]

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MKKFKVTVNGKVYEVEVEEIKDKDEISNIIQTATVSQPKVTATQATFQPVSKAEAPSSADKGSKIISAPMPGTILDVKVK
EGDRVKRGDVVVILEAMKMENEIMAPEEGVIASIHVSKGSSVNTGDVLVTMN

Sequences:

>Translated_132_residues
MKKFKVTVNGKVYEVEVEEIKDKDEISNIIQTATVSQPKVTATQATFQPVSKAEAPSSADKGSKIISAPMPGTILDVKVK
EGDRVKRGDVVVILEAMKMENEIMAPEEGVIASIHVSKGSSVNTGDVLVTMN
>Mature_132_residues
MKKFKVTVNGKVYEVEVEEIKDKDEISNIIQTATVSQPKVTATQATFQPVSKAEAPSSADKGSKIISAPMPGTILDVKVK
EGDRVKRGDVVVILEAMKMENEIMAPEEGVIASIHVSKGSSVNTGDVLVTMN

Specific function: Biotin carrier subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD) [H]

COG id: COG0511

COG function: function code I; Biotin carboxyl carrier protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 biotinyl-binding domain [H]

Homologues:

Organism=Homo sapiens, GI65506442, Length=69, Percent_Identity=40.5797101449275, Blast_Score=65, Evalue=2e-11,
Organism=Homo sapiens, GI189095269, Length=69, Percent_Identity=40.5797101449275, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17562816, Length=64, Percent_Identity=43.75, Blast_Score=63, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001882
- InterPro:   IPR000089
- InterPro:   IPR011053 [H]

Pfam domain/function: PF00364 Biotin_lipoyl [H]

EC number: =4.1.1.70 [H]

Molecular weight: Translated: 14158; Mature: 14158

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: PS50968 BIOTINYL_LIPOYL ; PS00188 BIOTIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFKVTVNGKVYEVEVEEIKDKDEISNIIQTATVSQPKVTATQATFQPVSKAEAPSSAD
CCEEEEEECCEEEEEEHHHCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCC
KGSKIISAPMPGTILDVKVKEGDRVKRGDVVVILEAMKMENEIMAPEEGVIASIHVSKGS
CCCEEEECCCCCEEEEEEECCCCCEECCCEEEEEEEECCCCCCCCCCCCEEEEEEECCCC
SVNTGDVLVTMN
CCCCCEEEEEEC
>Mature Secondary Structure
MKKFKVTVNGKVYEVEVEEIKDKDEISNIIQTATVSQPKVTATQATFQPVSKAEAPSSAD
CCEEEEEECCEEEEEEHHHCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCC
KGSKIISAPMPGTILDVKVKEGDRVKRGDVVVILEAMKMENEIMAPEEGVIASIHVSKGS
CCCEEEECCCCCEEEEEEECCCCCEECCCEEEEEEEECCCCCCCCCCCCEEEEEEECCCC
SVNTGDVLVTMN
CCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10027965 [H]