| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is 167039414
Identifier: 167039414
GI number: 167039414
Start: 788524
End: 790224
Strand: Direct
Name: 167039414
Synonym: Teth514_0759
Alternate gene names: NA
Gene position: 788524-790224 (Clockwise)
Preceding gene: 167039413
Following gene: 167039415
Centisome position: 32.09
GC content: 31.98
Gene sequence:
>1701_bases TTGAGGATTAAAGATGTGTATCCGTCAAAATCACAATATAGGCCTGGTGAAAAAGTTGAAATTATTGCAACATTTGAGGT AACGGATGATTTAGGTAACTATACTGTATCGTGTACTGTTTTAAATTTTCATGACATACTTTATAAAACAGAAAAAGAAT TAAAATTGCATGACGAAAAAGTTGTTTTTGAGTTTAATATAGAAAAAAACGAAAAAGAAATGATGGGCTTTGGGGTTGAA GTGGATTTGTACAGGAATAATGAAAAGATTAACAGTTTATCAACATCGTTTGATATTACCGAGTCATGGAAATTAGCACC GAGATACGGTTTTCTATCGGATTTTTTTGATAGAGATAAAAACGATGATAAAGATTTAGTACAGTTGAACAAATATCATA TAAATGTAGTACAGTTTTATGACTGGATGTATAGACATCATGAACTGTTACCCCCGACTAATAGTTTTGCTGATCCTCTT GGTAGGAATTTGTCAATTGATGTGGTAAAACAGAAAATTGATTATGCTCACAAATTTGGTATGATGGCTATTGCTTATGG TGCTGTTTATGGCTGTGAAAAGGAATTTTATGAGGAGCATAAAGTTTGGGCACTGTATAAAAATGATGGAACTGTTTTTG ATCTTATAAATTTGATTTACATTATGGATATATCAAAGAAATGTGGATGGCATGATCACATAATATCTGAATTTTTAAAG GCCATTAAATTTGGATTTGATGGTATACACATGGACCAGTACGGTTTCCCCAAAGAGGCATTGAGTGTTACTGACCAGGT TAAAAAAATAAGAAAGCTAAGGGACGAATTTACTGTTTTAATAAATGATACAAGGGAGTATATTGAGAAAAACGGATATA AACCTGCCTTAATTTTTAATGCTGTAAATAACTGGCCTATTGATACAGTAGCAAGTGCAAAACAAGACGTTGTATATATA GAAGTATGGCCTCCAAATGATACGTATCAGGATTTATATAATTTAATTACAAATGCGAAAAAATATGCTCCTGATAAGCA GGTTATTCTTGCAGCATATATGGAGCCTTTTTCAAAGAGGTCAAATATACCGATAGAATATGCAGAAAATGCTACAATTA TGGTGATGGCTACAATATTTGCAAGCGGTGGTTTTCACCTTTTGCTTGGTGAATTAAACGGCATATTAACAGAGGCCTAT TACCCTAATTATACAACAATAGACAGTGAAAGATTTATTAGAGAGTTAAGAGACTATTATGATTTTATTGTAAGATATGA AGAATTCTTATATGATTTTAACATTGTTGATAATACCATGACATATACTGGAGGAATAAATACTGAGTATGTTTTTAAAG GTACAAAGTTTTCACCAAAAGCTGAAAAGAATAGTGTATGGACTCTGGTAAAGGAAAAAGAGGGATATAAAATAATACAT CTTGTCAACTTTACTGGAGTACAAAGCATGAAATGGAATGAGGGCAAGGAGATAAGGCCCAAAATTATAAATAATATTGA AGCTACTGTACTTGTAGCAGAAAGTGTAAAAGGTGTATATTTAGCATCACCAGACATTGATTCTGGTAAACCGAAGAAAC TGGATTATGAATATGTACCTCATGAACATGGGAAAGCTATTAGATTTGTTATACCAGAATTAAGAGTTTGGGATATGGTT TATATAGTTTGTGAGAGTTAA
Upstream 100 bases:
>100_bases TATTGGGTTAATAAGTGGGGTAATATTGCAAAGCCATTATTGTGGTCACACGCTATGTATTTAGTACTTGACTATGAACT TAAAAAGGCAGGTGTACAAC
Downstream 100 bases:
>100_bases ACTAATGTAATATTGTTTAATAATGGATAAATATGATATATTGAGCTATTTACCACCTTTATAGTTAGTTTTTTAGCTTT AATTACTTTAGTTTTAACTG
Product: hypothetical protein
Products: NA
Alternate protein names: CITase [H]
Number of amino acids: Translated: 566; Mature: 566
Protein sequence:
>566_residues MRIKDVYPSKSQYRPGEKVEIIATFEVTDDLGNYTVSCTVLNFHDILYKTEKELKLHDEKVVFEFNIEKNEKEMMGFGVE VDLYRNNEKINSLSTSFDITESWKLAPRYGFLSDFFDRDKNDDKDLVQLNKYHINVVQFYDWMYRHHELLPPTNSFADPL GRNLSIDVVKQKIDYAHKFGMMAIAYGAVYGCEKEFYEEHKVWALYKNDGTVFDLINLIYIMDISKKCGWHDHIISEFLK AIKFGFDGIHMDQYGFPKEALSVTDQVKKIRKLRDEFTVLINDTREYIEKNGYKPALIFNAVNNWPIDTVASAKQDVVYI EVWPPNDTYQDLYNLITNAKKYAPDKQVILAAYMEPFSKRSNIPIEYAENATIMVMATIFASGGFHLLLGELNGILTEAY YPNYTTIDSERFIRELRDYYDFIVRYEEFLYDFNIVDNTMTYTGGINTEYVFKGTKFSPKAEKNSVWTLVKEKEGYKIIH LVNFTGVQSMKWNEGKEIRPKIINNIEATVLVAESVKGVYLASPDIDSGKPKKLDYEYVPHEHGKAIRFVIPELRVWDMV YIVCES
Sequences:
>Translated_566_residues MRIKDVYPSKSQYRPGEKVEIIATFEVTDDLGNYTVSCTVLNFHDILYKTEKELKLHDEKVVFEFNIEKNEKEMMGFGVE VDLYRNNEKINSLSTSFDITESWKLAPRYGFLSDFFDRDKNDDKDLVQLNKYHINVVQFYDWMYRHHELLPPTNSFADPL GRNLSIDVVKQKIDYAHKFGMMAIAYGAVYGCEKEFYEEHKVWALYKNDGTVFDLINLIYIMDISKKCGWHDHIISEFLK AIKFGFDGIHMDQYGFPKEALSVTDQVKKIRKLRDEFTVLINDTREYIEKNGYKPALIFNAVNNWPIDTVASAKQDVVYI EVWPPNDTYQDLYNLITNAKKYAPDKQVILAAYMEPFSKRSNIPIEYAENATIMVMATIFASGGFHLLLGELNGILTEAY YPNYTTIDSERFIRELRDYYDFIVRYEEFLYDFNIVDNTMTYTGGINTEYVFKGTKFSPKAEKNSVWTLVKEKEGYKIIH LVNFTGVQSMKWNEGKEIRPKIINNIEATVLVAESVKGVYLASPDIDSGKPKKLDYEYVPHEHGKAIRFVIPELRVWDMV YIVCES >Mature_566_residues MRIKDVYPSKSQYRPGEKVEIIATFEVTDDLGNYTVSCTVLNFHDILYKTEKELKLHDEKVVFEFNIEKNEKEMMGFGVE VDLYRNNEKINSLSTSFDITESWKLAPRYGFLSDFFDRDKNDDKDLVQLNKYHINVVQFYDWMYRHHELLPPTNSFADPL GRNLSIDVVKQKIDYAHKFGMMAIAYGAVYGCEKEFYEEHKVWALYKNDGTVFDLINLIYIMDISKKCGWHDHIISEFLK AIKFGFDGIHMDQYGFPKEALSVTDQVKKIRKLRDEFTVLINDTREYIEKNGYKPALIFNAVNNWPIDTVASAKQDVVYI EVWPPNDTYQDLYNLITNAKKYAPDKQVILAAYMEPFSKRSNIPIEYAENATIMVMATIFASGGFHLLLGELNGILTEAY YPNYTTIDSERFIRELRDYYDFIVRYEEFLYDFNIVDNTMTYTGGINTEYVFKGTKFSPKAEKNSVWTLVKEKEGYKIIH LVNFTGVQSMKWNEGKEIRPKIINNIEATVLVAESVKGVYLASPDIDSGKPKKLDYEYVPHEHGKAIRFVIPELRVWDMV YIVCES
Specific function: Produces cycloisomaltooligosaccharide from dextran [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBM6 (carbohydrate binding type-6) domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005084 - InterPro: IPR008979 [H]
Pfam domain/function: PF03422 CBM_6 [H]
EC number: =2.4.1.248 [H]
Molecular weight: Translated: 66051; Mature: 66051
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIKDVYPSKSQYRPGEKVEIIATFEVTDDLGNYTVSCTVLNFHDILYKTEKELKLHDEK CCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCEEEEEEEEEHHHHHHHCCHHHEECCCE VVFEFNIEKNEKEMMGFGVEVDLYRNNEKINSLSTSFDITESWKLAPRYGFLSDFFDRDK EEEEEECCCCCHHHHCCCEEEEEEECCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCC NDDKDLVQLNKYHINVVQFYDWMYRHHELLPPTNSFADPLGRNLSIDVVKQKIDYAHKFG CCCHHHHHHHHHEEEHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHH MMAIAYGAVYGCEKEFYEEHKVWALYKNDGTVFDLINLIYIMDISKKCGWHDHIISEFLK HHHHHHHHHHCCCHHHHCCCCEEEEECCCCCHHHHHHHHHHEECCCCCCCHHHHHHHHHH AIKFGFDGIHMDQYGFPKEALSVTDQVKKIRKLRDEFTVLINDTREYIEKNGYKPALIFN HHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHCCCCCEEEEE AVNNWPIDTVASAKQDVVYIEVWPPNDTYQDLYNLITNAKKYAPDKQVILAAYMEPFSKR CCCCCCCHHHHCCCCCEEEEEEECCCCHHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHC SNIPIEYAENATIMVMATIFASGGFHLLLGELNGILTEAYYPNYTTIDSERFIRELRDYY CCCCEEECCCCEEEEEEEEHHCCCEEEEEEHHCCCEEECCCCCCEEECHHHHHHHHHHHH DFIVRYEEFLYDFNIVDNTMTYTGGINTEYVFKGTKFSPKAEKNSVWTLVKEKEGYKIIH HHHHHHHHHHEEEEEECCEEEEECCCCCEEEEECCCCCCCCCCCCEEEEEEECCCEEEEE LVNFTGVQSMKWNEGKEIRPKIINNIEATVLVAESVKGVYLASPDIDSGKPKKLDYEYVP EEEECCCCCCCCCCCCCCCHHHHCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCEEECC HEHGKAIRFVIPELRVWDMVYIVCES CCCCCEEEEEECCCEEEEEEEEEECC >Mature Secondary Structure MRIKDVYPSKSQYRPGEKVEIIATFEVTDDLGNYTVSCTVLNFHDILYKTEKELKLHDEK CCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCEEEEEEEEEHHHHHHHCCHHHEECCCE VVFEFNIEKNEKEMMGFGVEVDLYRNNEKINSLSTSFDITESWKLAPRYGFLSDFFDRDK EEEEEECCCCCHHHHCCCEEEEEEECCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCC NDDKDLVQLNKYHINVVQFYDWMYRHHELLPPTNSFADPLGRNLSIDVVKQKIDYAHKFG CCCHHHHHHHHHEEEHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHH MMAIAYGAVYGCEKEFYEEHKVWALYKNDGTVFDLINLIYIMDISKKCGWHDHIISEFLK HHHHHHHHHHCCCHHHHCCCCEEEEECCCCCHHHHHHHHHHEECCCCCCCHHHHHHHHHH AIKFGFDGIHMDQYGFPKEALSVTDQVKKIRKLRDEFTVLINDTREYIEKNGYKPALIFN HHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHCCCCCEEEEE AVNNWPIDTVASAKQDVVYIEVWPPNDTYQDLYNLITNAKKYAPDKQVILAAYMEPFSKR CCCCCCCHHHHCCCCCEEEEEEECCCCHHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHC SNIPIEYAENATIMVMATIFASGGFHLLLGELNGILTEAYYPNYTTIDSERFIRELRDYY CCCCEEECCCCEEEEEEEEHHCCCEEEEEEHHCCCEEECCCCCCEEECHHHHHHHHHHHH DFIVRYEEFLYDFNIVDNTMTYTGGINTEYVFKGTKFSPKAEKNSVWTLVKEKEGYKIIH HHHHHHHHHHEEEEEECCEEEEECCCCCEEEEECCCCCCCCCCCCEEEEEEECCCEEEEE LVNFTGVQSMKWNEGKEIRPKIINNIEATVLVAESVKGVYLASPDIDSGKPKKLDYEYVP EEEECCCCCCCCCCCCCCCHHHHCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCEEECC HEHGKAIRFVIPELRVWDMVYIVCES CCCCCEEEEEECCCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA