Click here to switch to the map view.

The map label for this gene is yebA [C]

Identifier: 167039375

GI number: 167039375

Start: 742725

End: 744350

Strand: Direct

Name: yebA [C]

Synonym: Teth514_0717

Alternate gene names: 167039375

Gene position: 742725-744350 (Clockwise)

Preceding gene: 167039374

Following gene: 167039376

Centisome position: 30.23

GC content: 41.33

Gene sequence:

>1626_bases
ATGGATAACCAGGTTATGATTCTTAAAAACAGAGTTAAAAACATAATATCAAGATACCTGTGGAAAGCTGTAAAACCTGT
GCTCCTCACTTTTTTGCCCTACTTGATAATAATGGGTCTGGTAATACTTATACTTCTTTCAATTTTTGGTGCAGCTCCTA
AACAGATGGCTGAAGGAAAAGAAAAGGTGAAGAAGTATGTGGAAAGCATTAAGCCGGAAGTAATATCAAAGTACAGGCAG
GAAGAAAATTTTCAGCTGCCGTGGGGTATAGTTTATGCAGTTGAGGAGTATGCAAACGGCTGGAGCAAAGATGTTGATAT
GACAAGAGTCAGAAGAATAGCTGAAGGGCTTAAGCCGGAGTTTGAGTATATGGACTATACGGAGAAGATTGTAACAGTTA
GATTTGAAGTTAATGCTGAGGGAAATGTGACTGCTAAGGAGGAAGTTGCTTATGTGCCTGTTAAACTGCTTACTCAGGTA
AGAACTTATGAAGGGATTTATGTGTTTGAGTATCAAGAAGTGACCGATGTAAAAGGAAATGAATCACGCACATATATGGC
TTTAAAAGGGATGGAGTTTTATGAGGACTATTCTAAACTGGATGCAGTAATAGCAGGAGAAATTAAAACAAGCTTTTACA
GTAGTTATAAACGAGAAACTAAAACCATTGAGCTTTCTGGAGGAAAGCTTTTGTGGCCTGTTCCTTCAAGTCATACAGTA
ACATCGCCTTTTGGCATGAGGTTTCATCCAGTGACAGGAACATACAAAATGCACACGGGAATAGACATAGCGGCAAACAC
AGGAGATGAAATAGTTGCAGCAGCTGACGGTGTCGTGACAACATCAGGGCCTTATGGAGGGTATGGGAATACAGTGGTGA
TAGACCACAGCGGAGGCATTTCAACCTTGTATGCACACAACTCACAGGTGCTTGTTAAGGTTGGAGATGTTGTAAAGAAG
GGACAGAAGATAGCACTGGCAGGAAGCACAGGTATTGCTACAGGGTCTCACCTTCACTTTGAGGTGAGAGTAAGCGGAAC
TCCTGTAAATCCTTTAGGAGATATAAATGTGCCGGCAGGGAGTGTTGCAGTAAATGACAGTATTGACAGAAAGTTTATTC
TGGAGACGGGAATTGCTTTTATGAAAGGTGATCAAAACTTGGAGTGGCTGCTGGGCATTGGTGCGAGCAAAGAATATGCG
GCAAAACCCGGCAGAATACCGGAAAATTTGCTCCCTGTGTTTAAAGAAGCAGGAAGAGAATACGGTATTCCGTGGTATGT
GCTTGCAGCAATAGCTTTTAGAGAATCAAGTTTTAATCCAAACGCAATAGGTCCATATTTGCCTGAGCTGAAAACAAGGG
CTGTGGGTATGATGCAGTTCCTGCAAAGTACATTTGACGAGTATGCTGTAGACGGCAACAACAATGGAACAAAAAGTCCT
TTTGAGCCCGAAGATGCAGTTTTCACTGCTGCGAGATATTTAGCGGCAAATAGAGATGTTTATTTAAGGAAAGGGTTTAA
TGAAGATGAGGCTTTAAGATATGCGGTATGGCACTACAATCACGCATGGTGGTATGTAGACCAGGTAATGGCTATTGGAG
AAAAGTATAAAAATAATTACCCGTGA

Upstream 100 bases:

>100_bases
AAAATTCCCGATAGAACCCCTTCGGGAACCTATCAGGAATTTTTCAGGCGTAAATCTTATGGAATTTTAAATAAAAATAT
AGCTTTAGGTGAGGATATAT

Downstream 100 bases:

>100_bases
GGTGTTTTTTATGGAGAGGAGAAATAGAGCTGCTGCTTTAGCGAGCAGGATAATTCCTTATCATCCGGAATACAGAAAAA
TAACTGGTTCTGTAACAGCC

Product: peptidase M23B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 541; Mature: 541

Protein sequence:

>541_residues
MDNQVMILKNRVKNIISRYLWKAVKPVLLTFLPYLIIMGLVILILLSIFGAAPKQMAEGKEKVKKYVESIKPEVISKYRQ
EENFQLPWGIVYAVEEYANGWSKDVDMTRVRRIAEGLKPEFEYMDYTEKIVTVRFEVNAEGNVTAKEEVAYVPVKLLTQV
RTYEGIYVFEYQEVTDVKGNESRTYMALKGMEFYEDYSKLDAVIAGEIKTSFYSSYKRETKTIELSGGKLLWPVPSSHTV
TSPFGMRFHPVTGTYKMHTGIDIAANTGDEIVAAADGVVTTSGPYGGYGNTVVIDHSGGISTLYAHNSQVLVKVGDVVKK
GQKIALAGSTGIATGSHLHFEVRVSGTPVNPLGDINVPAGSVAVNDSIDRKFILETGIAFMKGDQNLEWLLGIGASKEYA
AKPGRIPENLLPVFKEAGREYGIPWYVLAAIAFRESSFNPNAIGPYLPELKTRAVGMMQFLQSTFDEYAVDGNNNGTKSP
FEPEDAVFTAARYLAANRDVYLRKGFNEDEALRYAVWHYNHAWWYVDQVMAIGEKYKNNYP

Sequences:

>Translated_541_residues
MDNQVMILKNRVKNIISRYLWKAVKPVLLTFLPYLIIMGLVILILLSIFGAAPKQMAEGKEKVKKYVESIKPEVISKYRQ
EENFQLPWGIVYAVEEYANGWSKDVDMTRVRRIAEGLKPEFEYMDYTEKIVTVRFEVNAEGNVTAKEEVAYVPVKLLTQV
RTYEGIYVFEYQEVTDVKGNESRTYMALKGMEFYEDYSKLDAVIAGEIKTSFYSSYKRETKTIELSGGKLLWPVPSSHTV
TSPFGMRFHPVTGTYKMHTGIDIAANTGDEIVAAADGVVTTSGPYGGYGNTVVIDHSGGISTLYAHNSQVLVKVGDVVKK
GQKIALAGSTGIATGSHLHFEVRVSGTPVNPLGDINVPAGSVAVNDSIDRKFILETGIAFMKGDQNLEWLLGIGASKEYA
AKPGRIPENLLPVFKEAGREYGIPWYVLAAIAFRESSFNPNAIGPYLPELKTRAVGMMQFLQSTFDEYAVDGNNNGTKSP
FEPEDAVFTAARYLAANRDVYLRKGFNEDEALRYAVWHYNHAWWYVDQVMAIGEKYKNNYP
>Mature_541_residues
MDNQVMILKNRVKNIISRYLWKAVKPVLLTFLPYLIIMGLVILILLSIFGAAPKQMAEGKEKVKKYVESIKPEVISKYRQ
EENFQLPWGIVYAVEEYANGWSKDVDMTRVRRIAEGLKPEFEYMDYTEKIVTVRFEVNAEGNVTAKEEVAYVPVKLLTQV
RTYEGIYVFEYQEVTDVKGNESRTYMALKGMEFYEDYSKLDAVIAGEIKTSFYSSYKRETKTIELSGGKLLWPVPSSHTV
TSPFGMRFHPVTGTYKMHTGIDIAANTGDEIVAAADGVVTTSGPYGGYGNTVVIDHSGGISTLYAHNSQVLVKVGDVVKK
GQKIALAGSTGIATGSHLHFEVRVSGTPVNPLGDINVPAGSVAVNDSIDRKFILETGIAFMKGDQNLEWLLGIGASKEYA
AKPGRIPENLLPVFKEAGREYGIPWYVLAAIAFRESSFNPNAIGPYLPELKTRAVGMMQFLQSTFDEYAVDGNNNGTKSP
FEPEDAVFTAARYLAANRDVYLRKGFNEDEALRYAVWHYNHAWWYVDQVMAIGEKYKNNYP

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=181, Percent_Identity=33.1491712707182, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1789099, Length=96, Percent_Identity=47.9166666666667, Blast_Score=82, Evalue=1e-16,
Organism=Escherichia coli, GI87082297, Length=122, Percent_Identity=39.344262295082, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI87082174, Length=153, Percent_Identity=39.8692810457516, Blast_Score=72, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 60505; Mature: 60505

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNQVMILKNRVKNIISRYLWKAVKPVLLTFLPYLIIMGLVILILLSIFGAAPKQMAEGK
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
EKVKKYVESIKPEVISKYRQEENFQLPWGIVYAVEEYANGWSKDVDMTRVRRIAEGLKPE
HHHHHHHHHHCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCC
FEYMDYTEKIVTVRFEVNAEGNVTAKEEVAYVPVKLLTQVRTYEGIYVFEYQEVTDVKGN
HHHCCCCCEEEEEEEEECCCCCCCHHHHHEEHHHHHHHHHHHCCCEEEEEECHHCCCCCC
ESRTYMALKGMEFYEDYSKLDAVIAGEIKTSFYSSYKRETKTIELSGGKLLWPVPSSHTV
CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEECCCCCEE
TSPFGMRFHPVTGTYKMHTGIDIAANTGDEIVAAADGVVTTSGPYGGYGNTVVIDHSGGI
CCCCCCEEECCCCEEEEECCEEEEECCCCCEEEECCCEEECCCCCCCCCCEEEEECCCCE
STLYAHNSQVLVKVGDVVKKGQKIALAGSTGIATGSHLHFEVRVSGTPVNPLGDINVPAG
EEEEECCCEEEEEECHHHHCCCEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCC
SVAVNDSIDRKFILETGIAFMKGDQNLEWLLGIGASKEYAAKPGRIPENLLPVFKEAGRE
CEEECCCCCCHHHHHHCCCEEECCCCCEEEEEECCCCHHCCCCCCCCHHHHHHHHHCCCC
YGIPWYVLAAIAFRESSFNPNAIGPYLPELKTRAVGMMQFLQSTFDEYAVDGNNNGTKSP
CCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCC
FEPEDAVFTAARYLAANRDVYLRKGFNEDEALRYAVWHYNHAWWYVDQVMAIGEKYKNNY
CCCCHHHHHHHHHHHCCCCEEEECCCCCCHHEEEEEEEECCHHHHHHHHHHHHHHHCCCC
P
C
>Mature Secondary Structure
MDNQVMILKNRVKNIISRYLWKAVKPVLLTFLPYLIIMGLVILILLSIFGAAPKQMAEGK
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
EKVKKYVESIKPEVISKYRQEENFQLPWGIVYAVEEYANGWSKDVDMTRVRRIAEGLKPE
HHHHHHHHHHCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCC
FEYMDYTEKIVTVRFEVNAEGNVTAKEEVAYVPVKLLTQVRTYEGIYVFEYQEVTDVKGN
HHHCCCCCEEEEEEEEECCCCCCCHHHHHEEHHHHHHHHHHHCCCEEEEEECHHCCCCCC
ESRTYMALKGMEFYEDYSKLDAVIAGEIKTSFYSSYKRETKTIELSGGKLLWPVPSSHTV
CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEECCCCCEE
TSPFGMRFHPVTGTYKMHTGIDIAANTGDEIVAAADGVVTTSGPYGGYGNTVVIDHSGGI
CCCCCCEEECCCCEEEEECCEEEEECCCCCEEEECCCEEECCCCCCCCCCEEEEECCCCE
STLYAHNSQVLVKVGDVVKKGQKIALAGSTGIATGSHLHFEVRVSGTPVNPLGDINVPAG
EEEEECCCEEEEEECHHHHCCCEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCC
SVAVNDSIDRKFILETGIAFMKGDQNLEWLLGIGASKEYAAKPGRIPENLLPVFKEAGRE
CEEECCCCCCHHHHHHCCCEEECCCCCEEEEEECCCCHHCCCCCCCCHHHHHHHHHCCCC
YGIPWYVLAAIAFRESSFNPNAIGPYLPELKTRAVGMMQFLQSTFDEYAVDGNNNGTKSP
CCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCC
FEPEDAVFTAARYLAANRDVYLRKGFNEDEALRYAVWHYNHAWWYVDQVMAIGEKYKNNY
CCCCHHHHHHHHHHHCCCCEEEECCCCCCHHEEEEEEEECCHHHHHHHHHHHHHHHCCCC
P
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]