| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is yabP [H]
Identifier: 167039348
GI number: 167039348
Start: 723793
End: 724089
Strand: Direct
Name: yabP [H]
Synonym: Teth514_0690
Alternate gene names: 167039348
Gene position: 723793-724089 (Clockwise)
Preceding gene: 167039347
Following gene: 167039349
Centisome position: 29.46
GC content: 33.33
Gene sequence:
>297_bases ATGGAAGATAAAAGGAACTTTTCAAGAACTGGGAAACCTCATAATATTACAATTGAAAATAGAGAAAGAATCAGTATTTC TGGGGTAACGAATGTTGTAAGCTTTGACGAAGAAACAGTAATATTAGAAACGGATTTAGGAGTTTTGACGATAAGAGGTC AGGGGCTTCACATTAATAAATTGAACCTTGATGATGGACAAGTGTCAATTGATGGTGAAGTAATAAATCTAAATTACAGT GACAAAAGTGGTCTTATAGGAAAATCAGGGGGGTTTATAAGTAGAATGTTTCGATAA
Upstream 100 bases:
>100_bases AAATCCTCCGGAAGGAGGATTTTTTTTGTTCTAAAAAAAGTACAAGATTCATAGATAATAATAGTCTATTAAAAAGAAGG GAGGTTTAAAGAGGGTTAAA
Downstream 100 bases:
>100_bases GTCGCATGTTGCGGCTTATTTTGTTTTATGTACTCGATTTTAAAAAGTTTAATTGCTATAATAAATTTGGATATTTTTGC GCAAAGGAAGTAGAGAGGTG
Product: YabP family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 98; Mature: 98
Protein sequence:
>98_residues MEDKRNFSRTGKPHNITIENRERISISGVTNVVSFDEETVILETDLGVLTIRGQGLHINKLNLDDGQVSIDGEVINLNYS DKSGLIGKSGGFISRMFR
Sequences:
>Translated_98_residues MEDKRNFSRTGKPHNITIENRERISISGVTNVVSFDEETVILETDLGVLTIRGQGLHINKLNLDDGQVSIDGEVINLNYS DKSGLIGKSGGFISRMFR >Mature_98_residues MEDKRNFSRTGKPHNITIENRERISISGVTNVVSFDEETVILETDLGVLTIRGQGLHINKLNLDDGQVSIDGEVINLNYS DKSGLIGKSGGFISRMFR
Specific function: Required for sporulation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Forespore outer membrane. Note=Forms a ring around the forespore [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012504 - InterPro: IPR022476 - ProDom: PD067726 [H]
Pfam domain/function: PF07873 YabP [H]
EC number: NA
Molecular weight: Translated: 10878; Mature: 10878
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDKRNFSRTGKPHNITIENRERISISGVTNVVSFDEETVILETDLGVLTIRGQGLHINK CCCCCCCCCCCCCCEEEECCCCEEEECCCEEEEECCCCEEEEECCCCEEEEECCCEEEEE LNLDDGQVSIDGEVINLNYSDKSGLIGKSGGFISRMFR ECCCCCEEEECCEEEEEEECCCCCCEECCCCCEEECCC >Mature Secondary Structure MEDKRNFSRTGKPHNITIENRERISISGVTNVVSFDEETVILETDLGVLTIRGQGLHINK CCCCCCCCCCCCCCEEEECCCCEEEECCCEEEEECCCCEEEEECCCCEEEEECCCEEEEE LNLDDGQVSIDGEVINLNYSDKSGLIGKSGGFISRMFR ECCCCCEEEECCEEEEEEECCCCCCEECCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]