Definition Thermoanaerobacter sp. X514 chromosome, complete genome.
Accession NC_010320
Length 2,457,259

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The map label for this gene is yabP [H]

Identifier: 167039348

GI number: 167039348

Start: 723793

End: 724089

Strand: Direct

Name: yabP [H]

Synonym: Teth514_0690

Alternate gene names: 167039348

Gene position: 723793-724089 (Clockwise)

Preceding gene: 167039347

Following gene: 167039349

Centisome position: 29.46

GC content: 33.33

Gene sequence:

>297_bases
ATGGAAGATAAAAGGAACTTTTCAAGAACTGGGAAACCTCATAATATTACAATTGAAAATAGAGAAAGAATCAGTATTTC
TGGGGTAACGAATGTTGTAAGCTTTGACGAAGAAACAGTAATATTAGAAACGGATTTAGGAGTTTTGACGATAAGAGGTC
AGGGGCTTCACATTAATAAATTGAACCTTGATGATGGACAAGTGTCAATTGATGGTGAAGTAATAAATCTAAATTACAGT
GACAAAAGTGGTCTTATAGGAAAATCAGGGGGGTTTATAAGTAGAATGTTTCGATAA

Upstream 100 bases:

>100_bases
AAATCCTCCGGAAGGAGGATTTTTTTTGTTCTAAAAAAAGTACAAGATTCATAGATAATAATAGTCTATTAAAAAGAAGG
GAGGTTTAAAGAGGGTTAAA

Downstream 100 bases:

>100_bases
GTCGCATGTTGCGGCTTATTTTGTTTTATGTACTCGATTTTAAAAAGTTTAATTGCTATAATAAATTTGGATATTTTTGC
GCAAAGGAAGTAGAGAGGTG

Product: YabP family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MEDKRNFSRTGKPHNITIENRERISISGVTNVVSFDEETVILETDLGVLTIRGQGLHINKLNLDDGQVSIDGEVINLNYS
DKSGLIGKSGGFISRMFR

Sequences:

>Translated_98_residues
MEDKRNFSRTGKPHNITIENRERISISGVTNVVSFDEETVILETDLGVLTIRGQGLHINKLNLDDGQVSIDGEVINLNYS
DKSGLIGKSGGFISRMFR
>Mature_98_residues
MEDKRNFSRTGKPHNITIENRERISISGVTNVVSFDEETVILETDLGVLTIRGQGLHINKLNLDDGQVSIDGEVINLNYS
DKSGLIGKSGGFISRMFR

Specific function: Required for sporulation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Forespore outer membrane. Note=Forms a ring around the forespore [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012504
- InterPro:   IPR022476
- ProDom:   PD067726 [H]

Pfam domain/function: PF07873 YabP [H]

EC number: NA

Molecular weight: Translated: 10878; Mature: 10878

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDKRNFSRTGKPHNITIENRERISISGVTNVVSFDEETVILETDLGVLTIRGQGLHINK
CCCCCCCCCCCCCCEEEECCCCEEEECCCEEEEECCCCEEEEECCCCEEEEECCCEEEEE
LNLDDGQVSIDGEVINLNYSDKSGLIGKSGGFISRMFR
ECCCCCEEEECCEEEEEEECCCCCCEECCCCCEEECCC
>Mature Secondary Structure
MEDKRNFSRTGKPHNITIENRERISISGVTNVVSFDEETVILETDLGVLTIRGQGLHINK
CCCCCCCCCCCCCCEEEECCCCEEEECCCEEEEECCCCEEEEECCCCEEEEECCCEEEEE
LNLDDGQVSIDGEVINLNYSDKSGLIGKSGGFISRMFR
ECCCCCEEEECCEEEEEEECCCCCCEECCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]