| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is dfx [H]
Identifier: 167039338
GI number: 167039338
Start: 714277
End: 714654
Strand: Reverse
Name: dfx [H]
Synonym: Teth514_0680
Alternate gene names: 167039338
Gene position: 714654-714277 (Counterclockwise)
Preceding gene: 167039342
Following gene: 167039325
Centisome position: 29.08
GC content: 39.15
Gene sequence:
>378_bases ATGGCTGACTTATATGGAGTTTATAAATGCGAAAAGTGTGGAAATATTGTAGAAGTGCTTCATGCTGGCCAAGGGACATT GGTATGCTGTGGCGAGCCAATGGTTAAAATGCAAGAAAAAACAGGAGATGCAGGTACAGAAAAGCACACACCAGTTATTG AAAGAAATGGCAATATTGTAACGGTTAAGGTAGGAAGCATACCACATCCAATGGAGGAAAAGCATTGGATTGAATGGATT TCTCTCTTAGCTGATGGTGTATATATGAGAAAAGTATTAAAACCAGGTGAAAAACCAGAAGCGGTTTTTGTAACAGACGC TAAAGACTTAAAAGCATGGTCCTACTGCAATTTGCACGGTCTATGGAAATCTGAGTAA
Upstream 100 bases:
>100_bases ATTATAAATATAAAGGATAATATATTTCCATTAAGATGTATTATCCAAGGCAAATTAATTCTAGTTGCACAGTTTTACAT AATTTAAAGGAGGAATCAAA
Downstream 100 bases:
>100_bases AAATAAGGGCGAAAAGCCCTTATTTTTTACTCTCTAACTTATACTTTTCCAACTCTTTTTCGGTAAGAGAGTATTTGCTA AAGACAATTAAACTCAACAA
Product: desulfoferrodoxin
Products: NA
Alternate protein names: Dfx; Superoxide reductase; SOR [H]
Number of amino acids: Translated: 125; Mature: 124
Protein sequence:
>125_residues MADLYGVYKCEKCGNIVEVLHAGQGTLVCCGEPMVKMQEKTGDAGTEKHTPVIERNGNIVTVKVGSIPHPMEEKHWIEWI SLLADGVYMRKVLKPGEKPEAVFVTDAKDLKAWSYCNLHGLWKSE
Sequences:
>Translated_125_residues MADLYGVYKCEKCGNIVEVLHAGQGTLVCCGEPMVKMQEKTGDAGTEKHTPVIERNGNIVTVKVGSIPHPMEEKHWIEWI SLLADGVYMRKVLKPGEKPEAVFVTDAKDLKAWSYCNLHGLWKSE >Mature_124_residues ADLYGVYKCEKCGNIVEVLHAGQGTLVCCGEPMVKMQEKTGDAGTEKHTPVIERNGNIVTVKVGSIPHPMEEKHWIEWIS LLADGVYMRKVLKPGEKPEAVFVTDAKDLKAWSYCNLHGLWKSE
Specific function: Catalyzes the one-electron reduction of superoxide anion radical to hydrogen peroxide at a nonheme ferrous iron center. Plays a fundamental role in case of oxidative stress via its superoxide detoxification activity [H]
COG id: COG2033
COG function: function code C; Desulfoferrodoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the desulfoferrodoxin family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002742 - InterPro: IPR004462 - InterPro: IPR004793 [H]
Pfam domain/function: PF06397 Desulfoferrod_N; PF01880 Desulfoferrodox [H]
EC number: =1.15.1.2 [H]
Molecular weight: Translated: 13942; Mature: 13811
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADLYGVYKCEKCGNIVEVLHAGQGTLVCCGEPMVKMQEKTGDAGTEKHTPVIERNGNIV CCCCCCCEEHHHHCHHHHHHHCCCCCEEECCCCCCHHHHHCCCCCCCCCCCEEECCCCEE TVKVGSIPHPMEEKHWIEWISLLADGVYMRKVLKPGEKPEAVFVTDAKDLKAWSYCNLHG EEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCEEEEECCCCCCEEEECCCCC LWKSE CCCCC >Mature Secondary Structure ADLYGVYKCEKCGNIVEVLHAGQGTLVCCGEPMVKMQEKTGDAGTEKHTPVIERNGNIV CCCCCCEEHHHHCHHHHHHHCCCCCEEECCCCCCHHHHHCCCCCCCCCCCEEECCCCEE TVKVGSIPHPMEEKHWIEWISLLADGVYMRKVLKPGEKPEAVFVTDAKDLKAWSYCNLHG EEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCEEEEECCCCCCEEEECCCCC LWKSE CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2549009; 2174880; 8262195 [H]