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The map label for this gene is yfiV [H]

Identifier: 167039289

GI number: 167039289

Start: 656064

End: 656507

Strand: Direct

Name: yfiV [H]

Synonym: Teth514_0630

Alternate gene names: 167039289

Gene position: 656064-656507 (Clockwise)

Preceding gene: 167039288

Following gene: 167039290

Centisome position: 26.7

GC content: 32.21

Gene sequence:

>444_bases
ATGGAAGAGATAAACAATGGATTAAAGATACTTAAGCTTTTAAAACAAATAATGGATATTATAAAGCATTCTATGAAATA
TGAGTGTAAAGATTTTGATATTACGGGTCCTCAAGGAATGCTTATGGGCATTTTAGCTCATTACGGTGAAATGAAGGTGA
GTGACCTAAGTCAAAAATTAGGGCTTTCCAATAGTACAGTTTCTGGCATTATTGACAGATTAGAAAAGCAAGGCTTGGTA
GAGAGGACGAGAAGCACTGAAGATAGAAGAGTTGTTTATGTCAGTGTGACTCCTAAGTTTAAAGATACTTTTCAAAAACA
TTTCAAAGAAGCTGAAGAGAAGTTTGAAAAATTAATAAGTAGAGCAAGCCCACAAGACCTTAATAAAATAATTGAAGGAT
TAGAAGCACTGAAAAAAATATTGGAAAAACAACATGATTTATAG

Upstream 100 bases:

>100_bases
GAAATCTTGACATGATATTATGAGAAGAGTAAAATATATTTTGCGTCCAAAATATTTGCATACAAAATATTTTAATACGA
AATAATTTGCGGTGGTGAAG

Downstream 100 bases:

>100_bases
TGAGGAAGTATAACAAAATTAAGTAAATAAGTTGAGGAAGTAGAAATTTAAAAAGAAGTAGTTCTCACAAAAGAAATCGA
GGCAAATTTTTAGGAGGAGA

Product: transcriptional regulator TrmB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MEEINNGLKILKLLKQIMDIIKHSMKYECKDFDITGPQGMLMGILAHYGEMKVSDLSQKLGLSNSTVSGIIDRLEKQGLV
ERTRSTEDRRVVYVSVTPKFKDTFQKHFKEAEEKFEKLISRASPQDLNKIIEGLEALKKILEKQHDL

Sequences:

>Translated_147_residues
MEEINNGLKILKLLKQIMDIIKHSMKYECKDFDITGPQGMLMGILAHYGEMKVSDLSQKLGLSNSTVSGIIDRLEKQGLV
ERTRSTEDRRVVYVSVTPKFKDTFQKHFKEAEEKFEKLISRASPQDLNKIIEGLEALKKILEKQHDL
>Mature_147_residues
MEEINNGLKILKLLKQIMDIIKHSMKYECKDFDITGPQGMLMGILAHYGEMKVSDLSQKLGLSNSTVSGIIDRLEKQGLV
ERTRSTEDRRVVYVSVTPKFKDTFQKHFKEAEEKFEKLISRASPQDLNKIIEGLEALKKILEKQHDL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 16907; Mature: 16907

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEINNGLKILKLLKQIMDIIKHSMKYECKDFDITGPQGMLMGILAHYGEMKVSDLSQKL
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHH
GLSNSTVSGIIDRLEKQGLVERTRSTEDRRVVYVSVTPKFKDTFQKHFKEAEEKFEKLIS
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHH
RASPQDLNKIIEGLEALKKILEKQHDL
CCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEEINNGLKILKLLKQIMDIIKHSMKYECKDFDITGPQGMLMGILAHYGEMKVSDLSQKL
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHH
GLSNSTVSGIIDRLEKQGLVERTRSTEDRRVVYVSVTPKFKDTFQKHFKEAEEKFEKLIS
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHH
RASPQDLNKIIEGLEALKKILEKQHDL
CCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]