| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is yclK [H]
Identifier: 167039248
GI number: 167039248
Start: 610904
End: 612316
Strand: Direct
Name: yclK [H]
Synonym: Teth514_0589
Alternate gene names: 167039248
Gene position: 610904-612316 (Clockwise)
Preceding gene: 167039247
Following gene: 167039249
Centisome position: 24.86
GC content: 32.41
Gene sequence:
>1413_bases TTGAGCAAAAATAGACTTTTTAAAAAACTTTTTATAAGCAATATGATTATCATCCTTATTACTTTGTCTATTCTTTCAGG GATGTTTTATCTGATGTTTCAAAACTATTACTTTGCTGACAAAGAAAAAATAATGTTAGAAGAGGCTCAAGAAATAAATG CAATTTTAAATGAATTTGCGGTAGGAGACATAAACATAGATAAATGGAATCAAGAACTAAACGTTGTTACTAGATTGATT AATGCTACTGTATGGATCGTAGATAAAGAAGGGCTAATTTACAGTCAATCACAACAGCAGGGCAAAGCATGGACAGGAGT AAGCCTCAGTAAAGAAGAAATAAAAAGCATTTTAGATGGACAATCTGTTGTAAAAAAAGGATATTTTGGTGGCAAATTCA ATCAGCCTGTTTTGACAGTAGGAGTGCCTCTTGTTATAAATGGCCGAATTGAAGGTGCTATATTTATGCATGCTCCTTTG ACAGAAATGAATAAAACTATTATTAACATCTTTATTTTAATGCTTTTATCTGGAGGAGTAGCTCTTATAATAGGTTTTGT GCTCATTTCTTATACTTCCAGTAAAATATCTCAGCCTCTTAAAGAGATGAGCTTAGCTGTTCAGCAGGTAGCGAAGGGGA ATTTTTCTGCAAGGGTACAACATAAGGAAGAAGATGAAATAGGGGATTTGGCTAAATCCTTTAATATTATGGCAAAAGAA TTAGAACAATTAGAAAACATGAGAAAAGATTTTGTGGCAAATGTTTCTCACGAATTGAGGTCTCCATTGACCTCTATACA AGGATATATAGATGGGATATTAGACGGTACTATTCCAAAGGAAAAAGCTTGCGATTATCTTAAAATAGTACAAAAAGAAA CACGGAGGATGTCTCGGCTCATAGACGATTTTCTTGAAATGACTAAACTTGAGTCAGGTCAATTTCCACTGCATAAGACG GAATTTGATATAAATGAACTTATAAGACTGGCCGTTATAAAGTTTGAAAAAAGAATAGTGGAAAAAGATCTAACCGTTAA AGTTGATTTTGAAGAAGACAGACGAATAGTTATAGGTGATAAGGACAAGATAGAACAAGTTTTGACAAATCTTATAGACA ATGCAATAAAATTTTCTAAAGAAAAGGGTATAATTCATATTTTTACTGAAATAAAAGATGACAAAGTATTCATTACTATA AAAGATAATGGAATAGGTATTTCTCCAGAAGACCAAGAGCATATATGGGATAGATTTTATAAAGCGGACAAATCGAGAGG AAAAGATGGAGCAGGCCTTGGGCTTTATATAGTAAAGCGTATTATAAATGCTCATAACGAGGAAATATGGGTAGAAAGTG AAGTTGGTAAAGGTACAGCATTTACTTTTACTTTGTCGGTGAAAAAATTTTAA
Upstream 100 bases:
>100_bases ATGTTCATATAAAGCGGCTTAGAGAGAAAATGGGAGATGGCCCTAATTGGAAACTTACCACCGTATGGGGTGTAGGTTAT AAATTTGAGGTGAACTAAAT
Downstream 100 bases:
>100_bases AAAATCACAATAAAATATTTACACTTTGTTAACACTTTATTCATAAATAAGGGATACAATAATATTTGAGAGCGACAAAT GCCTCTCCTTGACCTCCCTT
Product: integral membrane sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 470; Mature: 469
Protein sequence:
>470_residues MSKNRLFKKLFISNMIIILITLSILSGMFYLMFQNYYFADKEKIMLEEAQEINAILNEFAVGDINIDKWNQELNVVTRLI NATVWIVDKEGLIYSQSQQQGKAWTGVSLSKEEIKSILDGQSVVKKGYFGGKFNQPVLTVGVPLVINGRIEGAIFMHAPL TEMNKTIINIFILMLLSGGVALIIGFVLISYTSSKISQPLKEMSLAVQQVAKGNFSARVQHKEEDEIGDLAKSFNIMAKE LEQLENMRKDFVANVSHELRSPLTSIQGYIDGILDGTIPKEKACDYLKIVQKETRRMSRLIDDFLEMTKLESGQFPLHKT EFDINELIRLAVIKFEKRIVEKDLTVKVDFEEDRRIVIGDKDKIEQVLTNLIDNAIKFSKEKGIIHIFTEIKDDKVFITI KDNGIGISPEDQEHIWDRFYKADKSRGKDGAGLGLYIVKRIINAHNEEIWVESEVGKGTAFTFTLSVKKF
Sequences:
>Translated_470_residues MSKNRLFKKLFISNMIIILITLSILSGMFYLMFQNYYFADKEKIMLEEAQEINAILNEFAVGDINIDKWNQELNVVTRLI NATVWIVDKEGLIYSQSQQQGKAWTGVSLSKEEIKSILDGQSVVKKGYFGGKFNQPVLTVGVPLVINGRIEGAIFMHAPL TEMNKTIINIFILMLLSGGVALIIGFVLISYTSSKISQPLKEMSLAVQQVAKGNFSARVQHKEEDEIGDLAKSFNIMAKE LEQLENMRKDFVANVSHELRSPLTSIQGYIDGILDGTIPKEKACDYLKIVQKETRRMSRLIDDFLEMTKLESGQFPLHKT EFDINELIRLAVIKFEKRIVEKDLTVKVDFEEDRRIVIGDKDKIEQVLTNLIDNAIKFSKEKGIIHIFTEIKDDKVFITI KDNGIGISPEDQEHIWDRFYKADKSRGKDGAGLGLYIVKRIINAHNEEIWVESEVGKGTAFTFTLSVKKF >Mature_469_residues SKNRLFKKLFISNMIIILITLSILSGMFYLMFQNYYFADKEKIMLEEAQEINAILNEFAVGDINIDKWNQELNVVTRLIN ATVWIVDKEGLIYSQSQQQGKAWTGVSLSKEEIKSILDGQSVVKKGYFGGKFNQPVLTVGVPLVINGRIEGAIFMHAPLT EMNKTIINIFILMLLSGGVALIIGFVLISYTSSKISQPLKEMSLAVQQVAKGNFSARVQHKEEDEIGDLAKSFNIMAKEL EQLENMRKDFVANVSHELRSPLTSIQGYIDGILDGTIPKEKACDYLKIVQKETRRMSRLIDDFLEMTKLESGQFPLHKTE FDINELIRLAVIKFEKRIVEKDLTVKVDFEEDRRIVIGDKDKIEQVLTNLIDNAIKFSKEKGIIHIFTEIKDDKVFITIK DNGIGISPEDQEHIWDRFYKADKSRGKDGAGLGLYIVKRIINAHNEEIWVESEVGKGTAFTFTLSVKKF
Specific function: Could be member of the two-component regulatory system yclK/yclJ. Potentially phosphorylates yclJ [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1788393, Length=273, Percent_Identity=30.4029304029304, Blast_Score=160, Evalue=2e-40, Organism=Escherichia coli, GI1786600, Length=234, Percent_Identity=35.042735042735, Blast_Score=138, Evalue=9e-34, Organism=Escherichia coli, GI1789149, Length=350, Percent_Identity=28.8571428571429, Blast_Score=129, Evalue=3e-31, Organism=Escherichia coli, GI1786783, Length=297, Percent_Identity=25.9259259259259, Blast_Score=116, Evalue=3e-27, Organism=Escherichia coli, GI1788713, Length=228, Percent_Identity=32.0175438596491, Blast_Score=116, Evalue=4e-27, Organism=Escherichia coli, GI145693157, Length=237, Percent_Identity=31.2236286919831, Blast_Score=115, Evalue=6e-27, Organism=Escherichia coli, GI1790346, Length=285, Percent_Identity=29.1228070175439, Blast_Score=113, Evalue=3e-26, Organism=Escherichia coli, GI1788549, Length=262, Percent_Identity=28.6259541984733, Blast_Score=107, Evalue=2e-24, Organism=Escherichia coli, GI1790861, Length=317, Percent_Identity=26.813880126183, Blast_Score=104, Evalue=1e-23, Organism=Escherichia coli, GI1786912, Length=235, Percent_Identity=27.2340425531915, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1789808, Length=314, Percent_Identity=27.0700636942675, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1787894, Length=269, Percent_Identity=24.907063197026, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI1790436, Length=241, Percent_Identity=27.3858921161826, Blast_Score=97, Evalue=3e-21, Organism=Escherichia coli, GI48994928, Length=232, Percent_Identity=27.5862068965517, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI87081816, Length=337, Percent_Identity=23.7388724035608, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI87082128, Length=297, Percent_Identity=21.2121212121212, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1788279, Length=219, Percent_Identity=27.8538812785388, Blast_Score=80, Evalue=4e-16, Organism=Escherichia coli, GI1789403, Length=267, Percent_Identity=23.9700374531835, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI1790300, Length=243, Percent_Identity=25.5144032921811, Blast_Score=75, Evalue=7e-15, Organism=Escherichia coli, GI1787374, Length=279, Percent_Identity=20.4301075268817, Blast_Score=65, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 53490; Mature: 53359
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKNRLFKKLFISNMIIILITLSILSGMFYLMFQNYYFADKEKIMLEEAQEINAILNEFA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC VGDINIDKWNQELNVVTRLINATVWIVDKEGLIYSQSQQQGKAWTGVSLSKEEIKSILDG CCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCEECCCHHCCCCCCCCCCCHHHHHHHHCC QSVVKKGYFGGKFNQPVLTVGVPLVINGRIEGAIFMHAPLTEMNKTIINIFILMLLSGGV HHHHHCCCCCCCCCCCEEEECCCEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCH ALIIGFVLISYTSSKISQPLKEMSLAVQQVAKGNFSARVQHKEEDEIGDLAKSFNIMAKE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHH LEQLENMRKDFVANVSHELRSPLTSIQGYIDGILDGTIPKEKACDYLKIVQKETRRMSRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH IDDFLEMTKLESGQFPLHKTEFDINELIRLAVIKFEKRIVEKDLTVKVDFEEDRRIVIGD HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEECC KDKIEQVLTNLIDNAIKFSKEKGIIHIFTEIKDDKVFITIKDNGIGISPEDQEHIWDRFY HHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCHHHHHHHHH KADKSRGKDGAGLGLYIVKRIINAHNEEIWVESEVGKGTAFTFTLSVKKF HHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEEEEECC >Mature Secondary Structure SKNRLFKKLFISNMIIILITLSILSGMFYLMFQNYYFADKEKIMLEEAQEINAILNEFA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC VGDINIDKWNQELNVVTRLINATVWIVDKEGLIYSQSQQQGKAWTGVSLSKEEIKSILDG CCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCEECCCHHCCCCCCCCCCCHHHHHHHHCC QSVVKKGYFGGKFNQPVLTVGVPLVINGRIEGAIFMHAPLTEMNKTIINIFILMLLSGGV HHHHHCCCCCCCCCCCEEEECCCEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCH ALIIGFVLISYTSSKISQPLKEMSLAVQQVAKGNFSARVQHKEEDEIGDLAKSFNIMAKE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHH LEQLENMRKDFVANVSHELRSPLTSIQGYIDGILDGTIPKEKACDYLKIVQKETRRMSRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH IDDFLEMTKLESGQFPLHKTEFDINELIRLAVIKFEKRIVEKDLTVKVDFEEDRRIVIGD HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEECC KDKIEQVLTNLIDNAIKFSKEKGIIHIFTEIKDDKVFITIKDNGIGISPEDQEHIWDRFY HHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCHHHHHHHHH KADKSRGKDGAGLGLYIVKRIINAHNEEIWVESEVGKGTAFTFTLSVKKF HHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969502; 9384377 [H]