| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is murC [H]
Identifier: 167039242
GI number: 167039242
Start: 604885
End: 606279
Strand: Reverse
Name: murC [H]
Synonym: Teth514_0583
Alternate gene names: 167039242
Gene position: 606279-604885 (Counterclockwise)
Preceding gene: 167039276
Following gene: 167039239
Centisome position: 24.67
GC content: 32.97
Gene sequence:
>1395_bases ATGGATATAAATCTTGAAAACTTTAAAAGAGTGCATTTTATAGGAATTGGCGGTATAAGTATGAGCGGTTTAGCTCATAT ACTTTTGAATAACGGCCATATAGTAACAGGCTCAGATATAAAAAATTCTCATATAATCGAAAGGTTAAGACAAGAAGGAG CAGTTATAACAATACCTCACAATGAAAATAGTGTCATAGGTGCTGATTTAGTAGTGTATACAGCTGCTATCCATGAAGAT AATCCTGAATATCAAAAGGCTAAAGAATTAAATATACCTACTATAGATAGAGCTACCCTTTTAGGTCTCATTATGAAAAA ATACAAATACGGCATTGCTGTTGCAGGAAGTCATGGAAAGACAACTACTACTTCTTTAATATCTGTAATACTCGATGGTA TGGGATTTGACCCAACAGTTTTAGTAGGAGGAGAAGTAGATGTAATAGGAGGAAATGTGAAAGTTGGAAACAGTGAATAT TTTGTCACAGAAGCTTGTGAATATACAGATAGTTTTCTAAAGTTTTATCCTTACATAGCTGTTATACTAAATGTCGATTC AGATCACTTAGATTACTTCAAAAATATTGACAACATAAAGCAGTCTTTTAGGCAATTTGCTAATTTAGTTCCACCAGATG GATTTGTGGTAGCATGCAAAGATGATGCAAACACCATGTATGTTGTAAATGGGCTAAATAAAAACATTGTAACCTATGGT ATTTACCAAGATAGTGATTGGAAAGCAAAAAGCATAAGTTTTGATGATAAAGGTTGTGCAATTTTTGATGTTTATTATAA AGAGGAATATATGGGCAATTTTAAATTATCAATACCCGGAAAACACAATGTTTACAACGCCTTAGCTGCTTTGGCAGTAA GTCACCTTGTAGGAATCGACATAAAAAAAGCTTCTCATTATTTAACTGAGTTCAAAGGCACTCATAGAAGATTCGAAGTA AAAGGAATAGTTGACGGCATAACAATTGTGGATGACTATGCTCATCACCCTGCTGAAATTAAAGCAACTTTAGAAGCAGC AAAAAATTATCCTCATAAAAGAATTATTTGTATATTCCAGCCACATACTTACTCAAGAACTAAATCTTTGCTTAATGATT TTGCAGAGTCCTTTGACAATGCGGATAAAATAATAATAGCTGACATATACGCCGCAAGAGAGAAAGATACAGGAATTGTT TCTTCTAAAGATTTAGTGGAACTAATCTCTCAAAGAGGAAAGGATGTTTTGTACTTAAAAGACTTTGACTCTATAGTGGA GTATTTAAATAAAAATGCAAAAGCAGGCGATTTAGTATTAACAGTTGGAGCAGGAAATATCTACGAAGTAGGAGAAATGT TTTTAAAAGGCCATAAAAAAGCTGTAGGAATGTAA
Upstream 100 bases:
>100_bases TATAATTTTTTTATAAATATAGTTGCTTTTGACAAGCTTTAATCATATTTTAACCATGAAAAGGCAATAATAACAATAGG AACTGAGAGGAGCGTAAACT
Downstream 100 bases:
>100_bases ACCCTACAGCTTTTCATCTTGCAACACAAGATTTCCTCTCCACAAGCTTCACAGGCACAATTATATGGTCTATGTCTATC TCCTTTTGCTTTAACCTCGC
Product: UDP-N-acetylmuramate--L-alanine ligase
Products: NA
Alternate protein names: UDP-N-acetylmuramoyl-L-alanine synthetase [H]
Number of amino acids: Translated: 464; Mature: 464
Protein sequence:
>464_residues MDINLENFKRVHFIGIGGISMSGLAHILLNNGHIVTGSDIKNSHIIERLRQEGAVITIPHNENSVIGADLVVYTAAIHED NPEYQKAKELNIPTIDRATLLGLIMKKYKYGIAVAGSHGKTTTTSLISVILDGMGFDPTVLVGGEVDVIGGNVKVGNSEY FVTEACEYTDSFLKFYPYIAVILNVDSDHLDYFKNIDNIKQSFRQFANLVPPDGFVVACKDDANTMYVVNGLNKNIVTYG IYQDSDWKAKSISFDDKGCAIFDVYYKEEYMGNFKLSIPGKHNVYNALAALAVSHLVGIDIKKASHYLTEFKGTHRRFEV KGIVDGITIVDDYAHHPAEIKATLEAAKNYPHKRIICIFQPHTYSRTKSLLNDFAESFDNADKIIIADIYAAREKDTGIV SSKDLVELISQRGKDVLYLKDFDSIVEYLNKNAKAGDLVLTVGAGNIYEVGEMFLKGHKKAVGM
Sequences:
>Translated_464_residues MDINLENFKRVHFIGIGGISMSGLAHILLNNGHIVTGSDIKNSHIIERLRQEGAVITIPHNENSVIGADLVVYTAAIHED NPEYQKAKELNIPTIDRATLLGLIMKKYKYGIAVAGSHGKTTTTSLISVILDGMGFDPTVLVGGEVDVIGGNVKVGNSEY FVTEACEYTDSFLKFYPYIAVILNVDSDHLDYFKNIDNIKQSFRQFANLVPPDGFVVACKDDANTMYVVNGLNKNIVTYG IYQDSDWKAKSISFDDKGCAIFDVYYKEEYMGNFKLSIPGKHNVYNALAALAVSHLVGIDIKKASHYLTEFKGTHRRFEV KGIVDGITIVDDYAHHPAEIKATLEAAKNYPHKRIICIFQPHTYSRTKSLLNDFAESFDNADKIIIADIYAAREKDTGIV SSKDLVELISQRGKDVLYLKDFDSIVEYLNKNAKAGDLVLTVGAGNIYEVGEMFLKGHKKAVGM >Mature_464_residues MDINLENFKRVHFIGIGGISMSGLAHILLNNGHIVTGSDIKNSHIIERLRQEGAVITIPHNENSVIGADLVVYTAAIHED NPEYQKAKELNIPTIDRATLLGLIMKKYKYGIAVAGSHGKTTTTSLISVILDGMGFDPTVLVGGEVDVIGGNVKVGNSEY FVTEACEYTDSFLKFYPYIAVILNVDSDHLDYFKNIDNIKQSFRQFANLVPPDGFVVACKDDANTMYVVNGLNKNIVTYG IYQDSDWKAKSISFDDKGCAIFDVYYKEEYMGNFKLSIPGKHNVYNALAALAVSHLVGIDIKKASHYLTEFKGTHRRFEV KGIVDGITIVDDYAHHPAEIKATLEAAKNYPHKRIICIFQPHTYSRTKSLLNDFAESFDNADKIIIADIYAAREKDTGIV SSKDLVELISQRGKDVLYLKDFDSIVEYLNKNAKAGDLVLTVGAGNIYEVGEMFLKGHKKAVGM
Specific function: Cell wall formation [H]
COG id: COG0773
COG function: function code M; UDP-N-acetylmuramate-alanine ligase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MurCDEF family [H]
Homologues:
Organism=Escherichia coli, GI1786279, Length=461, Percent_Identity=35.1409978308026, Blast_Score=247, Evalue=1e-66, Organism=Escherichia coli, GI1790680, Length=474, Percent_Identity=28.0590717299578, Blast_Score=190, Evalue=2e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004101 - InterPro: IPR013221 - InterPro: IPR000713 - InterPro: IPR016040 - InterPro: IPR005758 [H]
Pfam domain/function: PF01225 Mur_ligase; PF02875 Mur_ligase_C; PF08245 Mur_ligase_M [H]
EC number: =6.3.2.8 [H]
Molecular weight: Translated: 51424; Mature: 51424
Theoretical pI: Translated: 6.46; Mature: 6.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDINLENFKRVHFIGIGGISMSGLAHILLNNGHIVTGSDIKNSHIIERLRQEGAVITIPH CCCCHHHCCEEEEEEECCCCHHCEEEEEEECCEEEECCCCCHHHHHHHHHHCCCEEEEEC NENSVIGADLVVYTAAIHEDNPEYQKAKELNIPTIDRATLLGLIMKKYKYGIAVAGSHGK CCCCEEECHHEEEEEECCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCEEEECCCCC TTTTSLISVILDGMGFDPTVLVGGEVDVIGGNVKVGNSEYFVTEACEYTDSFLKFYPYIA HHHHHHHHHHHHCCCCCCEEEECCEEEEECCEEEECCCCEEEEHHHHHHHHHHHHHCEEE VILNVDSDHLDYFKNIDNIKQSFRQFANLVPPDGFVVACKDDANTMYVVNGLNKNIVTYG EEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCCEEEEE IYQDSDWKAKSISFDDKGCAIFDVYYKEEYMGNFKLSIPGKHNVYNALAALAVSHLVGID EEECCCCCEEECCCCCCCCEEEEEEEHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHCCC IKKASHYLTEFKGTHRRFEVKGIVDGITIVDDYAHHPAEIKATLEAAKNYPHKRIICIFQ HHHHHHHHHHHCCCCEEEEEEEEECCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEEC PHTYSRTKSLLNDFAESFDNADKIIIADIYAAREKDTGIVSSKDLVELISQRGKDVLYLK CCCCHHHHHHHHHHHHHHCCCCEEEEEEEEHHCCCCCCCCCHHHHHHHHHHCCCEEEEEC DFDSIVEYLNKNAKAGDLVLTVGAGNIYEVGEMFLKGHKKAVGM CHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHCCHHHCCC >Mature Secondary Structure MDINLENFKRVHFIGIGGISMSGLAHILLNNGHIVTGSDIKNSHIIERLRQEGAVITIPH CCCCHHHCCEEEEEEECCCCHHCEEEEEEECCEEEECCCCCHHHHHHHHHHCCCEEEEEC NENSVIGADLVVYTAAIHEDNPEYQKAKELNIPTIDRATLLGLIMKKYKYGIAVAGSHGK CCCCEEECHHEEEEEECCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCEEEECCCCC TTTTSLISVILDGMGFDPTVLVGGEVDVIGGNVKVGNSEYFVTEACEYTDSFLKFYPYIA HHHHHHHHHHHHCCCCCCEEEECCEEEEECCEEEECCCCEEEEHHHHHHHHHHHHHCEEE VILNVDSDHLDYFKNIDNIKQSFRQFANLVPPDGFVVACKDDANTMYVVNGLNKNIVTYG EEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCCEEEEE IYQDSDWKAKSISFDDKGCAIFDVYYKEEYMGNFKLSIPGKHNVYNALAALAVSHLVGID EEECCCCCEEECCCCCCCCEEEEEEEHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHCCC IKKASHYLTEFKGTHRRFEVKGIVDGITIVDDYAHHPAEIKATLEAAKNYPHKRIICIFQ HHHHHHHHHHHCCCCEEEEEEEEECCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEEC PHTYSRTKSLLNDFAESFDNADKIIIADIYAAREKDTGIVSSKDLVELISQRGKDVLYLK CCCCHHHHHHHHHHHHHHCCCCEEEEEEEEHHCCCCCCCCCHHHHHHHHHHCCCEEEEEC DFDSIVEYLNKNAKAGDLVLTVGAGNIYEVGEMFLKGHKKAVGM CHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11997336 [H]