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The map label for this gene is ccpA [H]

Identifier: 167039241

GI number: 167039241

Start: 603858

End: 604871

Strand: Direct

Name: ccpA [H]

Synonym: Teth514_0582

Alternate gene names: 167039241

Gene position: 603858-604871 (Clockwise)

Preceding gene: 167039240

Following gene: 167039243

Centisome position: 24.57

GC content: 38.56

Gene sequence:

>1014_bases
ATGAATGTAACGATTAAAGATGTGGCAAAAAGGGCAAATGTTGCTCCTTCTACTGTATCGAGGGTTATTGCTGATAATCC
TCGTATAAGCAAAGAGACAAAAGAGAGAGTTTGGAAGGCGATGGAGGAATTGGGGTATTATCCAAATGCCATTGCCAGAA
GCCTTGCAAGTAAAGTGACAAATACATTAGGGCTTATAATGCCTCGCTCTACAGAGGAAGCTTTTTCAAATCCCTTTTTC
CCAGAAGTGATGAGAGGAATAAGTGTTGTTGCCCACAGAGAAAAATATGATTTGCTTTTATCAACATCTGGGAATCAAGA
AGAGGAAAAAGAAGCGGTTATAAATATGGTAAAAGGCAAACGAGTAGATGGAATAATTCTTTTATCTTCTCGTACAACCG
ATGAGCTTATACCTTGGTTAAGAGATGAGAAATTTCCTTTCGTTGTTATAGGTAAGCCTTTAGATGCCAAAGGTGTGTAT
TGGGTTGATAATGACAATATAGGGGCTTCTAAGCTTGCTACTAATTACCTTATTAAACATGGGCATAGAGAAATTGCTTT
TATAAGTGGTTCATTGGAATATGTAGTGAGTTTAGATAGATTAGATGGCTATAAACTTGCCCTTGAGGAAAATGGAATAC
CTTTTAAAAGAGAGTTGGCGGAACAAGACGAGTTTTCAGAAGACGGCGGATATAGGGCGATGATGAGAATATTAGAAAGA
GAAAAACCTACTGCAGTTGTGGTTACTGATGATGTTATGGCATTTGGTGTGATAAGGGCTGCAATAGATAAAGGATATAG
AGTTCCTGAGGATATATCGATAGTAGGGTTTAACAACATCCCCTTGTCAGCCTTTGCAAATCCACCCCTTACGACAATAG
ATATTTCCACGTTTGATTTGGGGATTAAGTCTGCAGAGCTTTTGATTGCGAGGTTAAAGCAAAAGGAGATAGACATAGAC
CATATAATTGTGCCTGTGAAGCTTGTGGAGAGGAAATCTTGTGTTGCAAGATGA

Upstream 100 bases:

>100_bases
CATGTTTAAAAAAATGAAAAGTGTTGACGTAAATAAAAGAATAGGATAGAATAATAAATAGAAGAGATGCAATCGGTTTC
ATTTTGAAGGTGGTGGTATA

Downstream 100 bases:

>100_bases
AAAGCTGTAGGGTTTACATTCCTACAGCTTTTTTATGGCCTTTTAAAAACATTTCTCCTACTTCGTAGATATTTCCTGCT
CCAACTGTTAATACTAAATC

Product: alanine racemase

Products: NA

Alternate protein names: Catabolite control protein [H]

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MNVTIKDVAKRANVAPSTVSRVIADNPRISKETKERVWKAMEELGYYPNAIARSLASKVTNTLGLIMPRSTEEAFSNPFF
PEVMRGISVVAHREKYDLLLSTSGNQEEEKEAVINMVKGKRVDGIILLSSRTTDELIPWLRDEKFPFVVIGKPLDAKGVY
WVDNDNIGASKLATNYLIKHGHREIAFISGSLEYVVSLDRLDGYKLALEENGIPFKRELAEQDEFSEDGGYRAMMRILER
EKPTAVVVTDDVMAFGVIRAAIDKGYRVPEDISIVGFNNIPLSAFANPPLTTIDISTFDLGIKSAELLIARLKQKEIDID
HIIVPVKLVERKSCVAR

Sequences:

>Translated_337_residues
MNVTIKDVAKRANVAPSTVSRVIADNPRISKETKERVWKAMEELGYYPNAIARSLASKVTNTLGLIMPRSTEEAFSNPFF
PEVMRGISVVAHREKYDLLLSTSGNQEEEKEAVINMVKGKRVDGIILLSSRTTDELIPWLRDEKFPFVVIGKPLDAKGVY
WVDNDNIGASKLATNYLIKHGHREIAFISGSLEYVVSLDRLDGYKLALEENGIPFKRELAEQDEFSEDGGYRAMMRILER
EKPTAVVVTDDVMAFGVIRAAIDKGYRVPEDISIVGFNNIPLSAFANPPLTTIDISTFDLGIKSAELLIARLKQKEIDID
HIIVPVKLVERKSCVAR
>Mature_337_residues
MNVTIKDVAKRANVAPSTVSRVIADNPRISKETKERVWKAMEELGYYPNAIARSLASKVTNTLGLIMPRSTEEAFSNPFF
PEVMRGISVVAHREKYDLLLSTSGNQEEEKEAVINMVKGKRVDGIILLSSRTTDELIPWLRDEKFPFVVIGKPLDAKGVY
WVDNDNIGASKLATNYLIKHGHREIAFISGSLEYVVSLDRLDGYKLALEENGIPFKRELAEQDEFSEDGGYRAMMRILER
EKPTAVVVTDDVMAFGVIRAAIDKGYRVPEDISIVGFNNIPLSAFANPPLTTIDISTFDLGIKSAELLIARLKQKEIDID
HIIVPVKLVERKSCVAR

Specific function: Transcriptional regulator involved in both the repression of carbohydrate utilization genes such as the alpha- amylase (amyE) and the acetyl-coenzyme A synthetase (acsA); and in the positive regulation of genes involved in excretion of excess carbon such

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lacI-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787580, Length=316, Percent_Identity=38.6075949367089, Blast_Score=199, Evalue=3e-52,
Organism=Escherichia coli, GI1787948, Length=334, Percent_Identity=36.5269461077844, Blast_Score=197, Evalue=9e-52,
Organism=Escherichia coli, GI1790369, Length=332, Percent_Identity=33.7349397590361, Blast_Score=190, Evalue=1e-49,
Organism=Escherichia coli, GI1790194, Length=335, Percent_Identity=34.3283582089552, Blast_Score=179, Evalue=2e-46,
Organism=Escherichia coli, GI1789068, Length=297, Percent_Identity=34.3434343434343, Blast_Score=173, Evalue=1e-44,
Organism=Escherichia coli, GI1789202, Length=292, Percent_Identity=33.5616438356164, Blast_Score=152, Evalue=3e-38,
Organism=Escherichia coli, GI1788474, Length=340, Percent_Identity=30, Blast_Score=149, Evalue=3e-37,
Organism=Escherichia coli, GI1787906, Length=342, Percent_Identity=26.9005847953216, Blast_Score=126, Evalue=2e-30,
Organism=Escherichia coli, GI1786540, Length=341, Percent_Identity=30.791788856305, Blast_Score=126, Evalue=2e-30,
Organism=Escherichia coli, GI48994940, Length=318, Percent_Identity=26.4150943396226, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI1790715, Length=323, Percent_Identity=28.7925696594427, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1789456, Length=345, Percent_Identity=28.695652173913, Blast_Score=104, Evalue=9e-24,
Organism=Escherichia coli, GI1790689, Length=339, Percent_Identity=23.8938053097345, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1786268, Length=318, Percent_Identity=22.6415094339623, Blast_Score=83, Evalue=3e-17,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006377
- InterPro:   IPR000843
- InterPro:   IPR010982
- InterPro:   IPR001761 [H]

Pfam domain/function: PF00356 LacI; PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 37680; Mature: 37680

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: PS50932 HTH_LACI_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVTIKDVAKRANVAPSTVSRVIADNPRISKETKERVWKAMEELGYYPNAIARSLASKVT
CCCCHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
NTLGLIMPRSTEEAFSNPFFPEVMRGISVVAHREKYDLLLSTSGNQEEEKEAVINMVKGK
HHHHEEECCCCHHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCC
RVDGIILLSSRTTDELIPWLRDEKFPFVVIGKPLDAKGVYWVDNDNIGASKLATNYLIKH
CCCEEEEEECCCHHHHHHHHCCCCCCEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHHC
GHREIAFISGSLEYVVSLDRLDGYKLALEENGIPFKRELAEQDEFSEDGGYRAMMRILER
CCCEEEEEECCEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHC
EKPTAVVVTDDVMAFGVIRAAIDKGYRVPEDISIVGFNNIPLSAFANPPLTTIDISTFDL
CCCCEEEEECHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEHHHC
GIKSAELLIARLKQKEIDIDHIIVPVKLVERKSCVAR
CCHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHCCC
>Mature Secondary Structure
MNVTIKDVAKRANVAPSTVSRVIADNPRISKETKERVWKAMEELGYYPNAIARSLASKVT
CCCCHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
NTLGLIMPRSTEEAFSNPFFPEVMRGISVVAHREKYDLLLSTSGNQEEEKEAVINMVKGK
HHHHEEECCCCHHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCC
RVDGIILLSSRTTDELIPWLRDEKFPFVVIGKPLDAKGVYWVDNDNIGASKLATNYLIKH
CCCEEEEEECCCHHHHHHHHCCCCCCEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHHC
GHREIAFISGSLEYVVSLDRLDGYKLALEENGIPFKRELAEQDEFSEDGGYRAMMRILER
CCCEEEEEECCEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHC
EKPTAVVVTDDVMAFGVIRAAIDKGYRVPEDISIVGFNNIPLSAFANPPLTTIDISTFDL
CCCCEEEEECHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEHHHC
GIKSAELLIARLKQKEIDIDHIIVPVKLVERKSCVAR
CCHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8200532 [H]