Click here to switch to the map view.

The map label for this gene is oppC [H]

Identifier: 167039207

GI number: 167039207

Start: 568668

End: 569600

Strand: Direct

Name: oppC [H]

Synonym: Teth514_0548

Alternate gene names: 167039207

Gene position: 568668-569600 (Clockwise)

Preceding gene: 167039206

Following gene: 167039208

Centisome position: 23.14

GC content: 42.55

Gene sequence:

>933_bases
ATGATGCAGAACAGTGCGGGAGAACTTTCTCAGGAACTTTTTACTCATGTAGGCAAAAATATAAGTGAAATGGAGGCTAT
AGCAAGGCCAAGCATTACCTACTGGCAGGATGCATGGAGAAGGTTAAAGCAAAATAAAGCAGCAATGCTGGGATTAATAA
TAATTATACTTTATACTTTTCTGGCAATAGTTGGACCTTATATGACTCCATACGACTATAGAACTACAAACCCCTCTGAG
ATTAACCAGCCGCCTTCAGCCAGGCACTGGTTTGGAACAGATTCCTTAGGAAGAGATTTGTGGGCACGCACATGGATGGG
CGCAAGGGTATCCTTAATGATTGGTTTTGTGGCAGCCCTTTTGAACGCGGTAATAGGTGTTCTAGTGGGGGGAATCTCGG
GTTATTTTGGTGGTAAAGTTGATATGATCATAATGAGGTTTGTTGATATTATGTATGCTATTCCATATATGATAATTGTT
ATATTGATGATGGTTGTCCTCGGGCAGGGTATTATGCCGTTGATTCTGGCACTGGTTATTGGCGGATGGGTTGGTATGGC
AAGGCTTGTCCGCGGGCAGATTCTTCAGTTAAAAGAACAAGAATTTGTACTGGCAGCAAAAGTACTCGGAGCAAGTCATT
CAAGAATAATTTGGAAGCACTTGATACCAAATGCGATGGGCGTAATTTTGGTAAACCTTACTATGTCTGTTCCGAGTGCT
ATATTCACTGAAGCCTTTTTAAGCTTTATAGGTCTTGGTGTAGTTCCTCCGCATTCAAGCTGGGGTCAGCTGGCATCTTA
CGGTGCCCAATCTTTTAGAGTATATCCCTACCAGCTTTTCATACCGGCATTCTTTATAAGTACAACAATGCTTTCCCTTA
ACCTCCTCGGCGATGGATTAAGGGATGCACTGGATCCAAGACTTCGCAGTTAA

Upstream 100 bases:

>100_bases
TTTATGGTCTATTCTTAATTGCAGCAAACTTTATAGTTGACATTATATACGGTTTTATAGACCCGAGAATCAGGATTGCA
GGGAAATAGGAGGTAAAAAG

Downstream 100 bases:

>100_bases
GGAGGTAAAAAGATGGAAAAACTTTTGGAAGTTAAAGATCTCGAAGTTTCGTTCAAAACCTATGCGGGGGAAATCAAAGC
GGTAAGAGGTGTTAGTTTTG

Product: binding-protein-dependent transport systems inner membrane component

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: Stage 0 sporulation protein KC [H]

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MMQNSAGELSQELFTHVGKNISEMEAIARPSITYWQDAWRRLKQNKAAMLGLIIIILYTFLAIVGPYMTPYDYRTTNPSE
INQPPSARHWFGTDSLGRDLWARTWMGARVSLMIGFVAALLNAVIGVLVGGISGYFGGKVDMIIMRFVDIMYAIPYMIIV
ILMMVVLGQGIMPLILALVIGGWVGMARLVRGQILQLKEQEFVLAAKVLGASHSRIIWKHLIPNAMGVILVNLTMSVPSA
IFTEAFLSFIGLGVVPPHSSWGQLASYGAQSFRVYPYQLFIPAFFISTTMLSLNLLGDGLRDALDPRLRS

Sequences:

>Translated_310_residues
MMQNSAGELSQELFTHVGKNISEMEAIARPSITYWQDAWRRLKQNKAAMLGLIIIILYTFLAIVGPYMTPYDYRTTNPSE
INQPPSARHWFGTDSLGRDLWARTWMGARVSLMIGFVAALLNAVIGVLVGGISGYFGGKVDMIIMRFVDIMYAIPYMIIV
ILMMVVLGQGIMPLILALVIGGWVGMARLVRGQILQLKEQEFVLAAKVLGASHSRIIWKHLIPNAMGVILVNLTMSVPSA
IFTEAFLSFIGLGVVPPHSSWGQLASYGAQSFRVYPYQLFIPAFFISTTMLSLNLLGDGLRDALDPRLRS
>Mature_310_residues
MMQNSAGELSQELFTHVGKNISEMEAIARPSITYWQDAWRRLKQNKAAMLGLIIIILYTFLAIVGPYMTPYDYRTTNPSE
INQPPSARHWFGTDSLGRDLWARTWMGARVSLMIGFVAALLNAVIGVLVGGISGYFGGKVDMIIMRFVDIMYAIPYMIIV
ILMMVVLGQGIMPLILALVIGGWVGMARLVRGQILQLKEQEFVLAAKVLGASHSRIIWKHLIPNAMGVILVNLTMSVPSA
IFTEAFLSFIGLGVVPPHSSWGQLASYGAQSFRVYPYQLFIPAFFISTTMLSLNLLGDGLRDALDPRLRS

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane. Also required for sporulation and competence [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787498, Length=293, Percent_Identity=45.0511945392491, Blast_Score=228, Evalue=4e-61,
Organism=Escherichia coli, GI1787054, Length=278, Percent_Identity=39.568345323741, Blast_Score=216, Evalue=1e-57,
Organism=Escherichia coli, GI1787760, Length=266, Percent_Identity=35.3383458646617, Blast_Score=168, Evalue=4e-43,
Organism=Escherichia coli, GI1789889, Length=244, Percent_Identity=36.8852459016393, Blast_Score=156, Evalue=1e-39,
Organism=Escherichia coli, GI1789964, Length=299, Percent_Identity=34.7826086956522, Blast_Score=150, Evalue=8e-38,
Organism=Escherichia coli, GI1788505, Length=294, Percent_Identity=33.3333333333333, Blast_Score=137, Evalue=7e-34,
Organism=Escherichia coli, GI1787549, Length=282, Percent_Identity=28.7234042553192, Blast_Score=112, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34359; Mature: 34359

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHCCCCCCC
>Mature Secondary Structure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HHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1901616; 1899858; 9384377 [H]