| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is groEL [H]
Identifier: 167039172
GI number: 167039172
Start: 526350
End: 527975
Strand: Direct
Name: groEL [H]
Synonym: Teth514_0513
Alternate gene names: 167039172
Gene position: 526350-527975 (Clockwise)
Preceding gene: 167039171
Following gene: 167039173
Centisome position: 21.42
GC content: 39.61
Gene sequence:
>1626_bases ATGGCAAAACAAATCAAATATGGAGAGGAAGCAAGAAGAGCATTAGAAAGAGGAGTTAATGCAGTTGCGGATACTGTAAA AGTTACATTAGGGCCAAGGGGTCGTAATGTAGTATTGGACAAAAAATATGGTTCACCTACGGTTACAAATGACGGTGTTA CTATTGCAAGAGAGATTGAATTAGAGGATCCATTTGAAAATCAAGGCGCACAACTTTTGAAGGAAGTAGCTACAAAAACT AATGATGTCGCAGGTGATGGTACAACGACTGCAACGCTTTTAGCTCAAGCAATGGTTCGTGAGGGACTCAAAAACCTCGC AGCAGGAGCTAACCCAATGCTTTTAAGAAGAGGTATTGCGAAGGCTGTAGATGCTGCAGTTGAGGGGTTAAAGAGGATAT CTAAACCTATTGATAATAAAGAATCAATTGCCCATGTTGCTTCTATCTCTGCTGCTGATGAAGAAATAGGTAATCTCATT GCAGAAGCAATGGACAAAGTAGGTAAAGATGGAGTTATAACGGTTGAAGAATCAAAGACTTTAGGTACAACCCTTGAGGT TGTTGAAGGAATGCAATTTGACAGAGGATATATTTCTCCATACATGGTAACTGATGCTGAAAAAATGGAAGCAGTATTAG AGGAGCCTGTTATACTCATAACAGATAAGAAACTTTCAAATATCCAAGACTTGTTGCCACTCTTGGAGCAAGTAGTGCAA CACGGTAAGAAACTTCTTATCATAGCTGATGATGTAGAAGGAGAAGCATTGGCAACATTAGTTGTTAACAAATTAAGAGG TACATTTACGTGTGTAGCAGTAAAAGCTCCTGGCTTTGGTGACAGAAGAAAAGAAATGTTACAAGATATAGCAATACTGA CAGGTGGTCAAGTAATTTCAGAAGAGTTAGGTTATGACTTAAAAGATGTGAGATTAGATATGCTTGGCCGCGCAAGACAA GTAAAAGTTACAAAAGAGAATACCACAATTGTAGGCGGAGCAGGCGATGCTGCAGAAATTAAGAAGAGAGTAAATCAAAT TAAGGCTCAAATTGAGGAAACTACCTCTGATTATGATAGAGAAAAATTACAAGAAAGACTGGCAAAATTGGCCGGTGGCG TAGCTGTCATTCAAGCTGGTGCTGCAACTGAGACAGAGCTTAAAGAAAAGAAACACAGAATTGAAGACGCATTGGCGGCT ACAAAAGCAGCAGTGGAGGAAGGTATAGTACCTGGTGGCGGTATTGCACTTCTCAATGTAATAGAAGATGTGCAAAAAGT AGTTGATTCCTTAGATGGCGACTTCAAGACAGGTGCGAAGATAGTTTTAAGAGCATTAGAAGAACCCGTAAGACAAATTG CAGCAAATGCTGGTGTTGACGGTTCTGTAATAGTAGAAAAAATAAAAGCTGCTAAAGATCCAAACTTCGGATATGATGCT TACAAGGAAGAATTTACAGACATGTTCAAAGCAGGTATCGTAGACCCAACAAAGGTTACAAGGACAGCTTTGCAAAATGC TGCATCAATTGCTTCAATGATACTTACGACAGAAGCAGTAGTGGTAGATGTACCAGAGAAGAATACAGCAATGCCTAATC CAGGAGCAGGAATGGATATGATGTGA
Upstream 100 bases:
>100_bases CCAAATATGCTGGGACAGAAGTTAAGTTAGATGGTGAAGAATATCTACTTTTAAGAGAAAGCGATATTCTAGCAATTATA GAATAAGGAGGTAGTTGAAA
Downstream 100 bases:
>100_bases TAAAAAGGGCTGAGCGAAAGCTTAGCCCTTTTTAAGTTTTGGCCTTGACAGCTTTTAAATTGTCTGATAAAATACTCATG TAACATTTTTAGGCGCCCGT
Product: chaperonin GroEL
Products: NA
Alternate protein names: GroEL protein; Protein Cpn60 [H]
Number of amino acids: Translated: 541; Mature: 540
Protein sequence:
>541_residues MAKQIKYGEEARRALERGVNAVADTVKVTLGPRGRNVVLDKKYGSPTVTNDGVTIAREIELEDPFENQGAQLLKEVATKT NDVAGDGTTTATLLAQAMVREGLKNLAAGANPMLLRRGIAKAVDAAVEGLKRISKPIDNKESIAHVASISAADEEIGNLI AEAMDKVGKDGVITVEESKTLGTTLEVVEGMQFDRGYISPYMVTDAEKMEAVLEEPVILITDKKLSNIQDLLPLLEQVVQ HGKKLLIIADDVEGEALATLVVNKLRGTFTCVAVKAPGFGDRRKEMLQDIAILTGGQVISEELGYDLKDVRLDMLGRARQ VKVTKENTTIVGGAGDAAEIKKRVNQIKAQIEETTSDYDREKLQERLAKLAGGVAVIQAGAATETELKEKKHRIEDALAA TKAAVEEGIVPGGGIALLNVIEDVQKVVDSLDGDFKTGAKIVLRALEEPVRQIAANAGVDGSVIVEKIKAAKDPNFGYDA YKEEFTDMFKAGIVDPTKVTRTALQNAASIASMILTTEAVVVDVPEKNTAMPNPGAGMDMM
Sequences:
>Translated_541_residues MAKQIKYGEEARRALERGVNAVADTVKVTLGPRGRNVVLDKKYGSPTVTNDGVTIAREIELEDPFENQGAQLLKEVATKT NDVAGDGTTTATLLAQAMVREGLKNLAAGANPMLLRRGIAKAVDAAVEGLKRISKPIDNKESIAHVASISAADEEIGNLI AEAMDKVGKDGVITVEESKTLGTTLEVVEGMQFDRGYISPYMVTDAEKMEAVLEEPVILITDKKLSNIQDLLPLLEQVVQ HGKKLLIIADDVEGEALATLVVNKLRGTFTCVAVKAPGFGDRRKEMLQDIAILTGGQVISEELGYDLKDVRLDMLGRARQ VKVTKENTTIVGGAGDAAEIKKRVNQIKAQIEETTSDYDREKLQERLAKLAGGVAVIQAGAATETELKEKKHRIEDALAA TKAAVEEGIVPGGGIALLNVIEDVQKVVDSLDGDFKTGAKIVLRALEEPVRQIAANAGVDGSVIVEKIKAAKDPNFGYDA YKEEFTDMFKAGIVDPTKVTRTALQNAASIASMILTTEAVVVDVPEKNTAMPNPGAGMDMM >Mature_540_residues AKQIKYGEEARRALERGVNAVADTVKVTLGPRGRNVVLDKKYGSPTVTNDGVTIAREIELEDPFENQGAQLLKEVATKTN DVAGDGTTTATLLAQAMVREGLKNLAAGANPMLLRRGIAKAVDAAVEGLKRISKPIDNKESIAHVASISAADEEIGNLIA EAMDKVGKDGVITVEESKTLGTTLEVVEGMQFDRGYISPYMVTDAEKMEAVLEEPVILITDKKLSNIQDLLPLLEQVVQH GKKLLIIADDVEGEALATLVVNKLRGTFTCVAVKAPGFGDRRKEMLQDIAILTGGQVISEELGYDLKDVRLDMLGRARQV KVTKENTTIVGGAGDAAEIKKRVNQIKAQIEETTSDYDREKLQERLAKLAGGVAVIQAGAATETELKEKKHRIEDALAAT KAAVEEGIVPGGGIALLNVIEDVQKVVDSLDGDFKTGAKIVLRALEEPVRQIAANAGVDGSVIVEKIKAAKDPNFGYDAY KEEFTDMFKAGIVDPTKVTRTALQNAASIASMILTTEAVVVDVPEKNTAMPNPGAGMDMM
Specific function: Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions [H]
COG id: COG0459
COG function: function code O; Chaperonin GroEL (HSP60 family)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chaperonin (HSP60) family [H]
Homologues:
Organism=Homo sapiens, GI41399285, Length=531, Percent_Identity=50.4708097928437, Blast_Score=509, Evalue=1e-144, Organism=Homo sapiens, GI31542947, Length=531, Percent_Identity=50.4708097928437, Blast_Score=509, Evalue=1e-144, Organism=Homo sapiens, GI24307939, Length=550, Percent_Identity=23.4545454545455, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI38455427, Length=132, Percent_Identity=30.3030303030303, Blast_Score=73, Evalue=8e-13, Organism=Escherichia coli, GI1790586, Length=532, Percent_Identity=61.0902255639098, Blast_Score=625, Evalue=1e-180, Organism=Caenorhabditis elegans, GI17555558, Length=528, Percent_Identity=48.2954545454545, Blast_Score=506, Evalue=1e-144, Organism=Caenorhabditis elegans, GI193210679, Length=210, Percent_Identity=48.5714285714286, Blast_Score=206, Evalue=3e-53, Organism=Caenorhabditis elegans, GI17564182, Length=551, Percent_Identity=21.5970961887477, Blast_Score=87, Evalue=2e-17, Organism=Caenorhabditis elegans, GI25144674, Length=567, Percent_Identity=25.3968253968254, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI25147750, Length=135, Percent_Identity=34.0740740740741, Blast_Score=65, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6323288, Length=528, Percent_Identity=51.7045454545455, Blast_Score=514, Evalue=1e-146, Organism=Saccharomyces cerevisiae, GI6322350, Length=548, Percent_Identity=23.7226277372263, Blast_Score=82, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6322524, Length=570, Percent_Identity=23.5087719298246, Blast_Score=77, Evalue=5e-15, Organism=Saccharomyces cerevisiae, GI6322446, Length=171, Percent_Identity=32.1637426900585, Blast_Score=67, Evalue=7e-12, Organism=Drosophila melanogaster, GI24641193, Length=529, Percent_Identity=49.7164461247637, Blast_Score=521, Evalue=1e-148, Organism=Drosophila melanogaster, GI24641191, Length=529, Percent_Identity=49.7164461247637, Blast_Score=521, Evalue=1e-148, Organism=Drosophila melanogaster, GI45550936, Length=526, Percent_Identity=47.5285171102662, Blast_Score=498, Evalue=1e-141, Organism=Drosophila melanogaster, GI45550132, Length=526, Percent_Identity=47.5285171102662, Blast_Score=498, Evalue=1e-141, Organism=Drosophila melanogaster, GI45550935, Length=526, Percent_Identity=47.5285171102662, Blast_Score=498, Evalue=1e-141, Organism=Drosophila melanogaster, GI17864606, Length=543, Percent_Identity=40.6998158379374, Blast_Score=422, Evalue=1e-118, Organism=Drosophila melanogaster, GI24584129, Length=530, Percent_Identity=34.9056603773585, Blast_Score=301, Evalue=6e-82, Organism=Drosophila melanogaster, GI19921262, Length=530, Percent_Identity=34.9056603773585, Blast_Score=301, Evalue=6e-82, Organism=Drosophila melanogaster, GI24645179, Length=532, Percent_Identity=21.9924812030075, Blast_Score=86, Evalue=9e-17, Organism=Drosophila melanogaster, GI24583944, Length=528, Percent_Identity=22.9166666666667, Blast_Score=79, Evalue=7e-15, Organism=Drosophila melanogaster, GI17647245, Length=172, Percent_Identity=27.3255813953488, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24652903, Length=172, Percent_Identity=27.3255813953488, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI18858175, Length=142, Percent_Identity=33.0985915492958, Blast_Score=66, Evalue=6e-11, Organism=Drosophila melanogaster, GI28571140, Length=142, Percent_Identity=33.0985915492958, Blast_Score=66, Evalue=7e-11,
Paralogues:
None
Copy number: 2180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 360 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 480 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 15012 Molecules/Cell In: Growth Phase,
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018370 - InterPro: IPR001844 - InterPro: IPR002423 [H]
Pfam domain/function: PF00118 Cpn60_TCP1 [H]
EC number: NA
Molecular weight: Translated: 57892; Mature: 57761
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: PS00296 CHAPERONINS_CPN60
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKQIKYGEEARRALERGVNAVADTVKVTLGPRGRNVVLDKKYGSPTVTNDGVTIAREIE CCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEEE LEDPFENQGAQLLKEVATKTNDVAGDGTTTATLLAQAMVREGLKNLAAGANPMLLRRGIA CCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH KAVDAAVEGLKRISKPIDNKESIAHVASISAADEEIGNLIAEAMDKVGKDGVITVEESKT HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC LGTTLEVVEGMQFDRGYISPYMVTDAEKMEAVLEEPVILITDKKLSNIQDLLPLLEQVVQ HHHHHHHHHCCCCCCCCCCCEEECCHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHH HGKKLLIIADDVEGEALATLVVNKLRGTFTCVAVKAPGFGDRRKEMLQDIAILTGGQVIS CCCEEEEEEECCCCHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCHHHH EELGYDLKDVRLDMLGRARQVKVTKENTTIVGGAGDAAEIKKRVNQIKAQIEETTSDYDR HHHCCCHHHHHHHHHCCCCEEEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH EKLQERLAKLAGGVAVIQAGAATETELKEKKHRIEDALAATKAAVEEGIVPGGGIALLNV HHHHHHHHHHHCCHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH IEDVQKVVDSLDGDFKTGAKIVLRALEEPVRQIAANAGVDGSVIVEKIKAAKDPNFGYDA HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHH YKEEFTDMFKAGIVDPTKVTRTALQNAASIASMILTTEAVVVDVPEKNTAMPNPGAGMDM HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCC M C >Mature Secondary Structure AKQIKYGEEARRALERGVNAVADTVKVTLGPRGRNVVLDKKYGSPTVTNDGVTIAREIE CCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEEE LEDPFENQGAQLLKEVATKTNDVAGDGTTTATLLAQAMVREGLKNLAAGANPMLLRRGIA CCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH KAVDAAVEGLKRISKPIDNKESIAHVASISAADEEIGNLIAEAMDKVGKDGVITVEESKT HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC LGTTLEVVEGMQFDRGYISPYMVTDAEKMEAVLEEPVILITDKKLSNIQDLLPLLEQVVQ HHHHHHHHHCCCCCCCCCCCEEECCHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHH HGKKLLIIADDVEGEALATLVVNKLRGTFTCVAVKAPGFGDRRKEMLQDIAILTGGQVIS CCCEEEEEEECCCCHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCHHHH EELGYDLKDVRLDMLGRARQVKVTKENTTIVGGAGDAAEIKKRVNQIKAQIEETTSDYDR HHHCCCHHHHHHHHHCCCCEEEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH EKLQERLAKLAGGVAVIQAGAATETELKEKKHRIEDALAATKAAVEEGIVPGGGIALLNV HHHHHHHHHHHCCHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH IEDVQKVVDSLDGDFKTGAKIVLRALEEPVRQIAANAGVDGSVIVEKIKAAKDPNFGYDA HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHH YKEEFTDMFKAGIVDPTKVTRTALQNAASIASMILTTEAVVVDVPEKNTAMPNPGAGMDM HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCC M C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9795109; 7912671 [H]