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The map label for this gene is ydiC [H]

Identifier: 167039150

GI number: 167039150

Start: 503826

End: 504518

Strand: Direct

Name: ydiC [H]

Synonym: Teth514_0489

Alternate gene names: 167039150

Gene position: 503826-504518 (Clockwise)

Preceding gene: 167039149

Following gene: 167039151

Centisome position: 20.5

GC content: 35.06

Gene sequence:

>693_bases
ATGAAAATTTTGGCAATAGATTCTTCTTCTAAAACTGCTACTGTTGCATTAGTAGATGAAAAGGGGATAATAGGAGAATA
CTCTATAAATTATCTAAGGCATTCAGTAATTTTAATGCCTATGATAGATGAACTACTTAAAAAGTGTGAAGTACCGATAA
ATCAAATAACTCATGTGGCTGTTTCAGAAGGACCGGGCTCTTTTACAGGGCTTAGAATTGGTGCTGCCACTGCAAAAGGT
TTGGCTCATGCTCTTAACATACCTATTGTAGGAGTATCTTCTCTTTTAGCTCTTGCATATAATGTCAGTGAATTTGAAGG
ATTAATATGCCCTGTCATAGATGCTTTAAATGAAAATGTTTATGGAATGCTGATAAGAGGTGGTAATTTTGAAGTTTTAA
TAGATGCTGGGGTGTATTCTTTAGAGGAAATTACGAAGTTGATAAGCAATTATTCTGACAAAGTGTTGTTCGTAGGAGAG
GGGGTTTATTCCTATAAAGATAAATTACAAGAGATGATAAGAGACAAAGCTTTATTTGCAAAGGATAAGGATAACATGGC
AAGAGCAGCTTCCATAGGAGAGATTGCTATTCAAAAGATAAAAAAAGGTGAAGTAGTTAGTTACTTTGATTTCAAGCCGA
TGTATATAAGGAAATCGGCTGCTGAAATTCGTTTAAGTGGCGAGGGGAGTTAA

Upstream 100 bases:

>100_bases
TAGAAGTGATAATTCAAAAAGGAGAAAAAGAAGATGAAAGAGTTATTTTATTTAAAGATTTTGGGAGACGATATGAGGAG
CTTTTAAAGGAGATGGGGCA

Downstream 100 bases:

>100_bases
TTAATGGATGTTATTATAAGGCCTATGAGGAAAGAAGATGTGGAGGAGGTCTTGGAAATTGAAAAGCTAAGTTTTAGCAC
TCCTTGGTCTAAAGAAGCTT

Product: peptidase M22, glycoprotease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MKILAIDSSSKTATVALVDEKGIIGEYSINYLRHSVILMPMIDELLKKCEVPINQITHVAVSEGPGSFTGLRIGAATAKG
LAHALNIPIVGVSSLLALAYNVSEFEGLICPVIDALNENVYGMLIRGGNFEVLIDAGVYSLEEITKLISNYSDKVLFVGE
GVYSYKDKLQEMIRDKALFAKDKDNMARAASIGEIAIQKIKKGEVVSYFDFKPMYIRKSAAEIRLSGEGS

Sequences:

>Translated_230_residues
MKILAIDSSSKTATVALVDEKGIIGEYSINYLRHSVILMPMIDELLKKCEVPINQITHVAVSEGPGSFTGLRIGAATAKG
LAHALNIPIVGVSSLLALAYNVSEFEGLICPVIDALNENVYGMLIRGGNFEVLIDAGVYSLEEITKLISNYSDKVLFVGE
GVYSYKDKLQEMIRDKALFAKDKDNMARAASIGEIAIQKIKKGEVVSYFDFKPMYIRKSAAEIRLSGEGS
>Mature_230_residues
MKILAIDSSSKTATVALVDEKGIIGEYSINYLRHSVILMPMIDELLKKCEVPINQITHVAVSEGPGSFTGLRIGAATAKG
LAHALNIPIVGVSSLLALAYNVSEFEGLICPVIDALNENVYGMLIRGGNFEVLIDAGVYSLEEITKLISNYSDKVLFVGE
GVYSYKDKLQEMIRDKALFAKDKDNMARAASIGEIAIQKIKKGEVVSYFDFKPMYIRKSAAEIRLSGEGS

Specific function: Unknown

COG id: COG1214

COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M22 family [H]

Homologues:

Organism=Escherichia coli, GI1788109, Length=234, Percent_Identity=27.3504273504274, Blast_Score=93, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022496
- InterPro:   IPR000905 [H]

Pfam domain/function: PF00814 Peptidase_M22 [H]

EC number: NA

Molecular weight: Translated: 25012; Mature: 25012

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILAIDSSSKTATVALVDEKGIIGEYSINYLRHSVILMPMIDELLKKCEVPINQITHVA
CEEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEEE
VSEGPGSFTGLRIGAATAKGLAHALNIPIVGVSSLLALAYNVSEFEGLICPVIDALNENV
EECCCCCCCEEEEEHHHHHHHHHHHCCCEECHHHHHHHHHCHHHHCCHHHHHHHHCCCCE
YGMLIRGGNFEVLIDAGVYSLEEITKLISNYSDKVLFVGEGVYSYKDKLQEMIRDKALFA
EEEEEECCCEEEEEECCCCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHC
KDKDNMARAASIGEIAIQKIKKGEVVSYFDFKPMYIRKSAAEIRLSGEGS
CCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEECCCEEEEEECCCC
>Mature Secondary Structure
MKILAIDSSSKTATVALVDEKGIIGEYSINYLRHSVILMPMIDELLKKCEVPINQITHVA
CEEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEEE
VSEGPGSFTGLRIGAATAKGLAHALNIPIVGVSSLLALAYNVSEFEGLICPVIDALNENV
EECCCCCCCEEEEEHHHHHHHHHHHCCCEECHHHHHHHHHCHHHHCCHHHHHHHHCCCCE
YGMLIRGGNFEVLIDAGVYSLEEITKLISNYSDKVLFVGEGVYSYKDKLQEMIRDKALFA
EEEEEECCCEEEEEECCCCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHC
KDKDNMARAASIGEIAIQKIKKGEVVSYFDFKPMYIRKSAAEIRLSGEGS
CCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEECCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]