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The map label for this gene is xerC [C]

Identifier: 167039091

GI number: 167039091

Start: 445313

End: 445711

Strand: Reverse

Name: xerC [C]

Synonym: Teth514_0430

Alternate gene names: 167039091

Gene position: 445711-445313 (Counterclockwise)

Preceding gene: 167039096

Following gene: 167039090

Centisome position: 18.14

GC content: 30.33

Gene sequence:

>399_bases
TTGTTTTTCTTAATTTTTTTATATTATATTTTCATATTTTATTGCCCTCAAAATTCTATATATCGGTGTCACTTTTCCTA
TGCTCAACACTGTGATATTGTTTATTTTTTCATTCACAGATGGTTTTATCCTTTTTACTACCTCTTTTACACTCGAAAGG
GCACTTATATTCATCCCAGAGCCTTCAATAGTAAATACTACAAATTGCGTGAAAAAGCCGGTTTAGAAAAAGATAAGAAT
CTTCATGCATTAAGATATACTTTTGCTGCACGATTATTAGAAGCGGGAGTACAGTTAAAAGTTGTACAAAAACTTTTCGG
ACATACTCAAATATCTACTACAGCAGATATATATTCTCATGTGTTGCTAGAGGTAAAAAGAGATTCTGTTAAAAATTAG

Upstream 100 bases:

>100_bases
ATGTCAAGATTTATTCAAAAAGGGATAGTGTCAAGATACTGTAGGATAATTTTTAGCGACAACCCCTGAAATATCTTAAA
TCAATGGTTTCCTGTTATGC

Downstream 100 bases:

>100_bases
AAAAGTATTTCGAAAATTAAAATGAGGCTAAATAAATATTTTGGGCACCAAATAACTTTAATTTGTTATGCAAACCATAA
AGCCTTATATTTAAGCGATG

Product: phage integrase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MFFLIFLYYIFIFYCPQNSIYRCHFSYAQHCDIVYFFIHRWFYPFYYLFYTRKGTYIHPRAFNSKYYKLREKAGLEKDKN
LHALRYTFAARLLEAGVQLKVVQKLFGHTQISTTADIYSHVLLEVKRDSVKN

Sequences:

>Translated_132_residues
MFFLIFLYYIFIFYCPQNSIYRCHFSYAQHCDIVYFFIHRWFYPFYYLFYTRKGTYIHPRAFNSKYYKLREKAGLEKDKN
LHALRYTFAARLLEAGVQLKVVQKLFGHTQISTTADIYSHVLLEVKRDSVKN
>Mature_132_residues
MFFLIFLYYIFIFYCPQNSIYRCHFSYAQHCDIVYFFIHRWFYPFYYLFYTRKGTYIHPRAFNSKYYKLREKAGLEKDKN
LHALRYTFAARLLEAGVQLKVVQKLFGHTQISTTADIYSHVLLEVKRDSVKN

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The xerC-xerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell div

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 16119; Mature: 16119

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFLIFLYYIFIFYCPQNSIYRCHFSYAQHCDIVYFFIHRWFYPFYYLFYTRKGTYIHPR
CHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHEECCCCEECCC
AFNSKYYKLREKAGLEKDKNLHALRYTFAARLLEAGVQLKVVQKLFGHTQISTTADIYSH
CCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHH
VLLEVKRDSVKN
HHHHHHHHCCCC
>Mature Secondary Structure
MFFLIFLYYIFIFYCPQNSIYRCHFSYAQHCDIVYFFIHRWFYPFYYLFYTRKGTYIHPR
CHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHEECCCCEECCC
AFNSKYYKLREKAGLEKDKNLHALRYTFAARLLEAGVQLKVVQKLFGHTQISTTADIYSH
CCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHH
VLLEVKRDSVKN
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]