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The map label for this gene is 167038998

Identifier: 167038998

GI number: 167038998

Start: 345429

End: 346112

Strand: Reverse

Name: 167038998

Synonym: Teth514_0331

Alternate gene names: NA

Gene position: 346112-345429 (Counterclockwise)

Preceding gene: 167039023

Following gene: 167038995

Centisome position: 14.09

GC content: 43.27

Gene sequence:

>684_bases
ATGTTTCCAATCAGGGATAATATACCAAGCAGACGACCACCCCTCATTACGCTCTTGCTCATAATAATAAATTCGCTCAT
CTTCTTCACTCTTTCAAGTGCTTCATACAGCACTTTTGCCGGGTTTGTTTACAAATACGGGCTTATACCAGCAAAAGTTA
CAAAACTGGTTATATCCGGTGTACCCTTTTCTAGCAGCGACTTATACCCTTTTATCACCAGTATGTTTCTTCACGGTAAC
ACACTTCACCTAATTAGCAACATGTGGATACTTTGGCTTTTTGGAGATAATGTTGAAGATAGGATGGGTCATATAAAATT
CCTCATTTTCTACCTCCTTAGTGGGGTAATCGCAGGTGTATTTCACATGGCTTTTAATCCCATCTCACCAGTGCCGGTGG
TAGGGGCTTCTGGAGCTATTGCAGGCGTTATGGGTGCATATTTCGTATTATTCCCGTCGGCAAGGATAATTACGCTGGTA
CCAAGCTTTTTCCTGGTTCCAGTCTTCCTTCCTATACCCGCCGTGGTCTACCTCTTCCTATGGTTCCTGACACAGCTCTA
TTCCGGCACGGTCTATTCTGTCATTGGTAGTACAACGGTTGGTGGAATAGCCTGGTGGGCACACATAGGAGGATTTATCA
GTGGTGTGTTGTTAAATAGGTTGTTCCTTAGAGATAGGTATTAA

Upstream 100 bases:

>100_bases
TTTTTCAGAATTACTTGTGCTATAATCTTAATATAATTTTGATTTGATACGGAACTCGGTTTTCCTGCAAAAGTAGAATA
AAAAAAGTGGAGGGTTAAAA

Downstream 100 bases:

>100_bases
TTAACTCATGCTCACAACGGCGATTCCTCCAGTCCAAAGAAAGCTAATATGTACCCAATAATCCATTTTTCCTGGCATAT
CTACTACTCATGCCAAAAAT

Product: rhomboid family protein

Products: NA

Alternate protein names: Integral Membrane Protein; Peptidase; Rhomboid-Like Protein; S54 Family Peptidase; Peptidase Protein; Membrane Serine Protease; Rhomboid Family Transmembrane Protein; LOW QUALITY PROTEIN Integral Membrane Protein; Transmembrane Rhomboid Family Protein; Subfamily; Rhomboid Serine Protease; Membrane Associated Serine Protease; Rhomboid Family Membrane Protein; Integral Membrane Rhomboid Family Protein; Regulatory Proteins IclR; Cytoplasmic Membrane Protein

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MFPIRDNIPSRRPPLITLLLIIINSLIFFTLSSASYSTFAGFVYKYGLIPAKVTKLVISGVPFSSSDLYPFITSMFLHGN
TLHLISNMWILWLFGDNVEDRMGHIKFLIFYLLSGVIAGVFHMAFNPISPVPVVGASGAIAGVMGAYFVLFPSARIITLV
PSFFLVPVFLPIPAVVYLFLWFLTQLYSGTVYSVIGSTTVGGIAWWAHIGGFISGVLLNRLFLRDRY

Sequences:

>Translated_227_residues
MFPIRDNIPSRRPPLITLLLIIINSLIFFTLSSASYSTFAGFVYKYGLIPAKVTKLVISGVPFSSSDLYPFITSMFLHGN
TLHLISNMWILWLFGDNVEDRMGHIKFLIFYLLSGVIAGVFHMAFNPISPVPVVGASGAIAGVMGAYFVLFPSARIITLV
PSFFLVPVFLPIPAVVYLFLWFLTQLYSGTVYSVIGSTTVGGIAWWAHIGGFISGVLLNRLFLRDRY
>Mature_227_residues
MFPIRDNIPSRRPPLITLLLIIINSLIFFTLSSASYSTFAGFVYKYGLIPAKVTKLVISGVPFSSSDLYPFITSMFLHGN
TLHLISNMWILWLFGDNVEDRMGHIKFLIFYLLSGVIAGVFHMAFNPISPVPVVGASGAIAGVMGAYFVLFPSARIITLV
PSFFLVPVFLPIPAVVYLFLWFLTQLYSGTVYSVIGSTTVGGIAWWAHIGGFISGVLLNRLFLRDRY

Specific function: Unknown

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25170; Mature: 25170

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFPIRDNIPSRRPPLITLLLIIINSLIFFTLSSASYSTFAGFVYKYGLIPAKVTKLVISG
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHC
VPFSSSDLYPFITSMFLHGNTLHLISNMWILWLFGDNVEDRMGHIKFLIFYLLSGVIAGV
CCCCCCCHHHHHHHHHHCCCHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
FHMAFNPISPVPVVGASGAIAGVMGAYFVLFPSARIITLVPSFFLVPVFLPIPAVVYLFL
HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
WFLTQLYSGTVYSVIGSTTVGGIAWWAHIGGFISGVLLNRLFLRDRY
HHHHHHHCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFPIRDNIPSRRPPLITLLLIIINSLIFFTLSSASYSTFAGFVYKYGLIPAKVTKLVISG
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHC
VPFSSSDLYPFITSMFLHGNTLHLISNMWILWLFGDNVEDRMGHIKFLIFYLLSGVIAGV
CCCCCCCHHHHHHHHHHCCCHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
FHMAFNPISPVPVVGASGAIAGVMGAYFVLFPSARIITLVPSFFLVPVFLPIPAVVYLFL
HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
WFLTQLYSGTVYSVIGSTTVGGIAWWAHIGGFISGVLLNRLFLRDRY
HHHHHHHCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA