| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is adcB [H]
Identifier: 167038944
GI number: 167038944
Start: 296392
End: 297186
Strand: Reverse
Name: adcB [H]
Synonym: Teth514_0276
Alternate gene names: 167038944
Gene position: 297186-296392 (Counterclockwise)
Preceding gene: 167038945
Following gene: 167038928
Centisome position: 12.09
GC content: 37.36
Gene sequence:
>795_bases ATGATTGATATTTTTTCCTATGAATTTATGAGAAGAGCATTTATAGCCGGAAGCATTATTTCAATAATTGCACCTTTAAC AGGTAGCTTTCTTGTCCTAAGACGGCTTTCACAAATAGGAGACACCCTTTCTCACGTTGCTTTAGCAGGAGTGGCAGCAG GTATTTTGCTTGGAATAAATCCTACATTAGGCTCCATAATTGTGGTGCTTTTAGCTTCTTTTGGAATAGAAAAACTGAGG AAGACATATTTCAGGTATTCCGAAATATCAATAGCCATAGTTATGTCTGCAGGAATGGCAGTAGCAATAATTCTTTTAAG TCTTTCAAGAGGCGGCGCCGCCAACATAATGAATTATCTCTTTGGAAGTATTGTGTCTGTAACAAACACTGACGTCCTTT TGATTTCAACTCTCGGTATCGTTGTAGTGGCGTCAATTATTTTGCTGTACAAAGAGTTATTGTACATCACCTTCGATGAA GAAGCAGCAAAAATTTCAGGTATACCTGTAAGCTATATCAATTTCTTCTTTACAGTACTAGTAGCTTTAACTGTCGCCCT CGCCATGAGAATTGTAGGTGCACTTTTAGTATCTTCACTAATGGTAATACCGGCTGCCGCAAGTTTAAGAATCGCCAAAA GCTTTAAACAGACAATATTTTATGCAATACTCTTTTCCTTTATATCAGTCTTTTCGGGAATATTTCTATCCTTTTACTTA AACTTATCCCCCGGTGGAAGTATAGTCCTCGTCTCGCTTTTTATAATGGGACTCGTTTCATTAAAGAAGAGGTAA
Upstream 100 bases:
>100_bases GAAAAATGTGAAGCCGTCGACCTTACAGCAGGAGAATTAGCTGAAGTATATGGATATCCAGTAAAAATAGCAAAACATCA TCACAATGGGAGTGTTAAAA
Downstream 100 bases:
>100_bases ATAAGGAGAAAAGTAGGGGATAGTACATACTATCCCCTCAGACTGTAGACAAACTTTCGTAAAGGAGATATTCTGCATAA GGAGCGACTTGTTACAAAGC
Product: ABC-3 protein
Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MIDIFSYEFMRRAFIAGSIISIIAPLTGSFLVLRRLSQIGDTLSHVALAGVAAGILLGINPTLGSIIVVLLASFGIEKLR KTYFRYSEISIAIVMSAGMAVAIILLSLSRGGAANIMNYLFGSIVSVTNTDVLLISTLGIVVVASIILLYKELLYITFDE EAAKISGIPVSYINFFFTVLVALTVALAMRIVGALLVSSLMVIPAAASLRIAKSFKQTIFYAILFSFISVFSGIFLSFYL NLSPGGSIVLVSLFIMGLVSLKKR
Sequences:
>Translated_264_residues MIDIFSYEFMRRAFIAGSIISIIAPLTGSFLVLRRLSQIGDTLSHVALAGVAAGILLGINPTLGSIIVVLLASFGIEKLR KTYFRYSEISIAIVMSAGMAVAIILLSLSRGGAANIMNYLFGSIVSVTNTDVLLISTLGIVVVASIILLYKELLYITFDE EAAKISGIPVSYINFFFTVLVALTVALAMRIVGALLVSSLMVIPAAASLRIAKSFKQTIFYAILFSFISVFSGIFLSFYL NLSPGGSIVLVSLFIMGLVSLKKR >Mature_264_residues MIDIFSYEFMRRAFIAGSIISIIAPLTGSFLVLRRLSQIGDTLSHVALAGVAAGILLGINPTLGSIIVVLLASFGIEKLR KTYFRYSEISIAIVMSAGMAVAIILLSLSRGGAANIMNYLFGSIVSVTNTDVLLISTLGIVVVASIILLYKELLYITFDE EAAKISGIPVSYINFFFTVLVALTVALAMRIVGALLVSSLMVIPAAASLRIAKSFKQTIFYAILFSFISVFSGIFLSFYL NLSPGGSIVLVSLFIMGLVSLKKR
Specific function: Part of the high-affinity ABC transporter complex AdcABC involved in zinc import (Probable). Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1108
COG function: function code P; ABC-type Mn2+/Zn2+ transport systems, permease components
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ABC-3 integral membrane protein family [H]
Homologues:
Organism=Escherichia coli, GI1788166, Length=257, Percent_Identity=31.9066147859922, Blast_Score=132, Evalue=2e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001626 [H]
Pfam domain/function: PF00950 ABC-3 [H]
EC number: NA
Molecular weight: Translated: 28329; Mature: 28329
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: PS00211 ABC_TRANSPORTER_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDIFSYEFMRRAFIAGSIISIIAPLTGSFLVLRRLSQIGDTLSHVALAGVAAGILLGIN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PTLGSIIVVLLASFGIEKLRKTYFRYSEISIAIVMSAGMAVAIILLSLSRGGAANIMNYL CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH FGSIVSVTNTDVLLISTLGIVVVASIILLYKELLYITFDEEAAKISGIPVSYINFFFTVL HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHCCCCHHHHHHHHHHH VALTVALAMRIVGALLVSSLMVIPAAASLRIAKSFKQTIFYAILFSFISVFSGIFLSFYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NLSPGGSIVLVSLFIMGLVSLKKR CCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIDIFSYEFMRRAFIAGSIISIIAPLTGSFLVLRRLSQIGDTLSHVALAGVAAGILLGIN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PTLGSIIVVLLASFGIEKLRKTYFRYSEISIAIVMSAGMAVAIILLSLSRGGAANIMNYL CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH FGSIVSVTNTDVLLISTLGIVVVASIILLYKELLYITFDEEAAKISGIPVSYINFFFTVL HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHCCCCHHHHHHHHHHH VALTVALAMRIVGALLVSSLMVIPAAASLRIAKSFKQTIFYAILFSFISVFSGIFLSFYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NLSPGGSIVLVSLFIMGLVSLKKR CCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Zn (II) [Periplasm]; H2O; ATP [C]
Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9274031; 9384377 [H]