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The map label for this gene is xylH [H]

Identifier: 167038828

GI number: 167038828

Start: 158137

End: 159303

Strand: Direct

Name: xylH [H]

Synonym: Teth514_0158

Alternate gene names: 167038828

Gene position: 158137-159303 (Clockwise)

Preceding gene: 167038827

Following gene: 167038829

Centisome position: 6.44

GC content: 32.9

Gene sequence:

>1167_bases
ATGGTAAAGCCTAAAGATAATGAATATAAACAATATGTATCAAAGCTTGGAATTTTGAACATAAATATGAAATTATATAC
TATGCTTATAGCATTAATAGCTATATGGGCTATATTTTCAATAGCAACAGATGGCAATTTTATTACACCAAGAAACATAT
CTAATCTTTTAAGACAGGCAACCTCTACTGGGATTTTGGCTATTGGAATGGTATTTGTAATCATTGCAGGTCAAATAGAT
TTATCAGTCGGTTCTTTACTTGGTTTAACAGGTGGTATTGCGGCTATTTTAAATGTTTGGTATCACGTAAATGGGATAGT
TTCTATTTTGGTAGCTTTAGCAATAGGCGTGATAATTGGATTATGGAATGGATGGTGGGTTGCTTATAGAAACGTTCCGG
CTTTTATTGTGACACTTGCAGGGATGCTTGTGTTTAGAGGAATTCTAATCGGTATAAGTAAAGGATATACTATTGCTCCT
TTGAGCTCAGATTTTCAATTTATAGGGCAAGCTTATTTAACACAAAATAGCGGATATTTACTGGGGATTATAGCTGCTTT
TTTGATAGTTTATTTAGTGTTAAATAGCAGAAAAACAAAAGCTAAATATAATTTAGATATTCCTCCATTAGGAATTGATA
TTTTAAAAATGACTTTTTTAATAATTCTCGTTGGTTTATTTGTCTTTATTTTAAATTTATATCAAGGTGTCCCGTTATCC
GTATTGATTTTATTGATATTAGCGTTAATTTTCTCGTACATTTCTTCTAAAACTGTGTTTGGAAGAAGAGTATACGCTAT
TGGTGGTAATGTTGAAGCTGCTAAATTATCAGGCATTGATGTCAAAAAGATTACTCTAATTTTATTTGCTATAAATGGTT
TGCTTGCTGCATTTGCAGGAATACTACTAACTTCAACGTTAAATGCTGCATCTGTTTCTGCAGGGCAAAATGCGGAGTTA
GATGCAATTGCTGCTAGTGTGATTGGTGGTGCTAGTCTGAGCGGTGGAGTAGGGACAGTGTTTGGAGCGGTTATAGGTGC
GTTAGTTATGGCAAGTATAGATAATGGAATGAGTATGCTTAATTCTCCACCATTTTGGCAATTTGTTGTTAAAGGATTAA
TTTTACTTATAGCTGTATGGATAGATGTGGTATCTAAAAATAAATAG

Upstream 100 bases:

>100_bases
GAATAATTGTAATGCATGAAGGCGAGAAAAAAGGTGAATTTGAAAACAAAAATGTAACACAGGAAATGATAATGCAATGT
GCAATAGGAGGTAAGGAATG

Downstream 100 bases:

>100_bases
TGATATAATTAATATATGGAAAATAAAACAATGAAAATGGAATAAAAAGGTGAAGAAATGATAACAGCGGATCAATTATT
AGTTAAGCAAATAAATAAAT

Product: monosaccharide-transporting ATPase

Products: ADP; phosphate; xylose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MVKPKDNEYKQYVSKLGILNINMKLYTMLIALIAIWAIFSIATDGNFITPRNISNLLRQATSTGILAIGMVFVIIAGQID
LSVGSLLGLTGGIAAILNVWYHVNGIVSILVALAIGVIIGLWNGWWVAYRNVPAFIVTLAGMLVFRGILIGISKGYTIAP
LSSDFQFIGQAYLTQNSGYLLGIIAAFLIVYLVLNSRKTKAKYNLDIPPLGIDILKMTFLIILVGLFVFILNLYQGVPLS
VLILLILALIFSYISSKTVFGRRVYAIGGNVEAAKLSGIDVKKITLILFAINGLLAAFAGILLTSTLNAASVSAGQNAEL
DAIAASVIGGASLSGGVGTVFGAVIGALVMASIDNGMSMLNSPPFWQFVVKGLILLIAVWIDVVSKNK

Sequences:

>Translated_388_residues
MVKPKDNEYKQYVSKLGILNINMKLYTMLIALIAIWAIFSIATDGNFITPRNISNLLRQATSTGILAIGMVFVIIAGQID
LSVGSLLGLTGGIAAILNVWYHVNGIVSILVALAIGVIIGLWNGWWVAYRNVPAFIVTLAGMLVFRGILIGISKGYTIAP
LSSDFQFIGQAYLTQNSGYLLGIIAAFLIVYLVLNSRKTKAKYNLDIPPLGIDILKMTFLIILVGLFVFILNLYQGVPLS
VLILLILALIFSYISSKTVFGRRVYAIGGNVEAAKLSGIDVKKITLILFAINGLLAAFAGILLTSTLNAASVSAGQNAEL
DAIAASVIGGASLSGGVGTVFGAVIGALVMASIDNGMSMLNSPPFWQFVVKGLILLIAVWIDVVSKNK
>Mature_388_residues
MVKPKDNEYKQYVSKLGILNINMKLYTMLIALIAIWAIFSIATDGNFITPRNISNLLRQATSTGILAIGMVFVIIAGQID
LSVGSLLGLTGGIAAILNVWYHVNGIVSILVALAIGVIIGLWNGWWVAYRNVPAFIVTLAGMLVFRGILIGISKGYTIAP
LSSDFQFIGQAYLTQNSGYLLGIIAAFLIVYLVLNSRKTKAKYNLDIPPLGIDILKMTFLIILVGLFVFILNLYQGVPLS
VLILLILALIFSYISSKTVFGRRVYAIGGNVEAAKLSGIDVKKITLILFAINGLLAAFAGILLTSTLNAASVSAGQNAEL
DAIAASVIGGASLSGGVGTVFGAVIGALVMASIDNGMSMLNSPPFWQFVVKGLILLIAVWIDVVSKNK

Specific function: Part of the binding-protein-dependent transport system for D-xylose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4214

COG function: function code G; ABC-type xylose transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789992, Length=392, Percent_Identity=50.5102040816327, Blast_Score=351, Evalue=6e-98,
Organism=Escherichia coli, GI1790191, Length=356, Percent_Identity=37.0786516853933, Blast_Score=157, Evalue=1e-39,
Organism=Escherichia coli, GI1788896, Length=386, Percent_Identity=30.5699481865285, Blast_Score=140, Evalue=1e-34,
Organism=Escherichia coli, GI145693152, Length=147, Percent_Identity=42.1768707482993, Blast_Score=113, Evalue=2e-26,
Organism=Escherichia coli, GI1790524, Length=152, Percent_Identity=42.1052631578947, Blast_Score=112, Evalue=4e-26,
Organism=Escherichia coli, GI1788471, Length=370, Percent_Identity=32.1621621621622, Blast_Score=95, Evalue=8e-21,
Organism=Escherichia coli, GI87082395, Length=145, Percent_Identity=37.9310344827586, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1787793, Length=132, Percent_Identity=38.6363636363636, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1787794, Length=153, Percent_Identity=32.6797385620915, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI145693214, Length=129, Percent_Identity=35.6589147286822, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 41301; Mature: 41301

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKPKDNEYKQYVSKLGILNINMKLYTMLIALIAIWAIFSIATDGNFITPRNISNLLRQA
CCCCCCCHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHH
TSTGILAIGMVFVIIAGQIDLSVGSLLGLTGGIAAILNVWYHVNGIVSILVALAIGVIIG
HCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LWNGWWVAYRNVPAFIVTLAGMLVFRGILIGISKGYTIAPLSSDFQFIGQAYLTQNSGYL
HHCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCCCHH
LGIIAAFLIVYLVLNSRKTKAKYNLDIPPLGIDILKMTFLIILVGLFVFILNLYQGVPLS
HHHHHHHHHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
VLILLILALIFSYISSKTVFGRRVYAIGGNVEAAKLSGIDVKKITLILFAINGLLAAFAG
HHHHHHHHHHHHHHHCCCHHCCEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHH
ILLTSTLNAASVSAGQNAELDAIAASVIGGASLSGGVGTVFGAVIGALVMASIDNGMSML
HHHHHCCCHHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
NSPPFWQFVVKGLILLIAVWIDVVSKNK
CCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVKPKDNEYKQYVSKLGILNINMKLYTMLIALIAIWAIFSIATDGNFITPRNISNLLRQA
CCCCCCCHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHH
TSTGILAIGMVFVIIAGQIDLSVGSLLGLTGGIAAILNVWYHVNGIVSILVALAIGVIIG
HCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LWNGWWVAYRNVPAFIVTLAGMLVFRGILIGISKGYTIAPLSSDFQFIGQAYLTQNSGYL
HHCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCCCHH
LGIIAAFLIVYLVLNSRKTKAKYNLDIPPLGIDILKMTFLIILVGLFVFILNLYQGVPLS
HHHHHHHHHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
VLILLILALIFSYISSKTVFGRRVYAIGGNVEAAKLSGIDVKKITLILFAINGLLAAFAG
HHHHHHHHHHHHHHHCCCHHCCEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHH
ILLTSTLNAASVSAGQNAELDAIAASVIGGASLSGGVGTVFGAVIGALVMASIDNGMSML
HHHHHCCCHHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
NSPPFWQFVVKGLILLIAVWIDVVSKNK
CCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; xylose [Periplasm]; H2O [C]

Specific reaction: ATP + xylose [Periplasm] + H2O = ADP + phosphate + xylose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]