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The map label for this gene is rnfA [H]

Identifier: 167038756

GI number: 167038756

Start: 84261

End: 84833

Strand: Direct

Name: rnfA [H]

Synonym: Teth514_0083

Alternate gene names: 167038756

Gene position: 84261-84833 (Clockwise)

Preceding gene: 167038755

Following gene: 167038757

Centisome position: 3.43

GC content: 29.67

Gene sequence:

>573_bases
ATGAATATATTTATAATATTGATTAATACGATATTTGTCAACAATTATGTTTTTGCCCGTTTTTTAGGGATATGTCCCTT
CTTAGGTGTATCTAATAAAACAGAAACAGCTACTGGAATGGGTATGGCTGTAACTTTTGTAATTACACTATCGTCAGTTA
TAACTTATATAATACATCATGCTATATTAGTTCCACTAAATTTAGAATATTTGCAAACTATAGTTTTTATACTTGTTATA
GCTTCTTTAGTACAATTTGTTGAAATATTTCTTAAAAAAACTAGTCCAAATCTATATAGTGCATTAGGTATATATCTTCC
ATTGATAACTACTAACTGCATAGTACTAGGAGTAGCTATATTGAATATTCAAGAAGGCTATACATTATTTGAAACGATTT
TTAATGCCCTAGGAGCATCTATTGGTTTTGCTATTGCATTGTTGCTTATGGCTGGAATAAGAGAGAAGCTTGAAATAATA
GATGTTCCAAAGGCTTTAGAAGGTGTTCCAATAACATTAATAACTGCAGGTCTTATATCCATAGCGTTTTTAGGATTTAA
TGGGCTTGTTTAG

Upstream 100 bases:

>100_bases
CCAGGAGCGTTTATTGTACTTGGGATATTAATTGGGATTTTTAATTATGTTAGAAAGAGAAAAGAAGCTTCTGAGACTGG
TGTAAGGGAGGAAGTTTTAG

Downstream 100 bases:

>100_bases
GAGGTAATAAAATGGATGGTATATTGTATGCAATAGTAGTATTAGGCGGTTTAGGATTTTTATTTGGATCAAGTCTTTCT
TTAGCATCTAAGATTTTTGC

Product: RnfABCDGE type electron transport complex subunit A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MNIFIILINTIFVNNYVFARFLGICPFLGVSNKTETATGMGMAVTFVITLSSVITYIIHHAILVPLNLEYLQTIVFILVI
ASLVQFVEIFLKKTSPNLYSALGIYLPLITTNCIVLGVAILNIQEGYTLFETIFNALGASIGFAIALLLMAGIREKLEII
DVPKALEGVPITLITAGLISIAFLGFNGLV

Sequences:

>Translated_190_residues
MNIFIILINTIFVNNYVFARFLGICPFLGVSNKTETATGMGMAVTFVITLSSVITYIIHHAILVPLNLEYLQTIVFILVI
ASLVQFVEIFLKKTSPNLYSALGIYLPLITTNCIVLGVAILNIQEGYTLFETIFNALGASIGFAIALLLMAGIREKLEII
DVPKALEGVPITLITAGLISIAFLGFNGLV
>Mature_190_residues
MNIFIILINTIFVNNYVFARFLGICPFLGVSNKTETATGMGMAVTFVITLSSVITYIIHHAILVPLNLEYLQTIVFILVI
ASLVQFVEIFLKKTSPNLYSALGIYLPLITTNCIVLGVAILNIQEGYTLFETIFNALGASIGFAIALLLMAGIREKLEII
DVPKALEGVPITLITAGLISIAFLGFNGLV

Specific function: May be part of a membrane complex involved in electron transport [H]

COG id: COG4657

COG function: function code C; Predicted NADH:ubiquinone oxidoreductase, subunit RnfA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nqrDE/rnfAE family [H]

Homologues:

Organism=Escherichia coli, GI1787914, Length=189, Percent_Identity=53.968253968254, Blast_Score=213, Evalue=9e-57,
Organism=Escherichia coli, GI1787919, Length=151, Percent_Identity=28.476821192053, Blast_Score=61, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003667
- InterPro:   IPR011293 [H]

Pfam domain/function: PF02508 Rnf-Nqr [H]

EC number: NA

Molecular weight: Translated: 20614; Mature: 20614

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIFIILINTIFVNNYVFARFLGICPFLGVSNKTETATGMGMAVTFVITLSSVITYIIHH
CEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AILVPLNLEYLQTIVFILVIASLVQFVEIFLKKTSPNLYSALGIYLPLITTNCIVLGVAI
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LNIQEGYTLFETIFNALGASIGFAIALLLMAGIREKLEIIDVPKALEGVPITLITAGLIS
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHH
IAFLGFNGLV
HHHHHCCCCC
>Mature Secondary Structure
MNIFIILINTIFVNNYVFARFLGICPFLGVSNKTETATGMGMAVTFVITLSSVITYIIHH
CEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AILVPLNLEYLQTIVFILVIASLVQFVEIFLKKTSPNLYSALGIYLPLITTNCIVLGVAI
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LNIQEGYTLFETIFNALGASIGFAIALLLMAGIREKLEIIDVPKALEGVPITLITAGLIS
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHH
IAFLGFNGLV
HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA