| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
Click here to switch to the map view.
The map label for this gene is rsgI [H]
Identifier: 167038746
GI number: 167038746
Start: 74898
End: 75890
Strand: Reverse
Name: rsgI [H]
Synonym: Teth514_0073
Alternate gene names: 167038746
Gene position: 75890-74898 (Counterclockwise)
Preceding gene: 167038747
Following gene: 167038745
Centisome position: 3.09
GC content: 25.18
Gene sequence:
>993_bases ATGAAGGCTGTTGTAGTTCAAAAAGAAAAAAATAAAACTTATGTAATGACTGAAAAAGGAGAATTTAAGTGCTTGAAAAA TTTGCAAAATGTAGATATAGGTGAAACTATCGAACTTAACGAAAATTTTGTAGCTTTTAAGCCTATTGCTAAAATTTTAA TAGCTGCTTCTATTCTTCTCGCATTAATATTTACTATTATCAATTTTAAATCAGCAGAAGTTTACGCTTATGTGTATATA GATATAAATCCAAGCATTGAAGTTTTAATAGACAAAAATGGAAAAATAATAAGTGCCAATCCTATAAATGAAGATGGAAA AAAAATCTTAAAAAATCTCTCTTATAAAGGCCTTGACATTACAACGTTTATAAATCAAACAGTTGAAGAATCGCAAAAAT TAGGGTTTTTAAAAGAAGATGATGCAGTAATAATTACTACTGTTCCTATTAAAAATTCACCAATTATAAATGAACAAATA CAAAAAGCTATTAATAATATTAAAAAGATAAATACTAATGTTCAAATAGAAACTTTAAAATCCAATGAAACTCAAAGAGA GGAAGCTAAAAAAGAAAAAGTCTCTCCTGGAAGACTTATTATATGGCAAAAAGCCAAAGAAGAAGGAATAGAGATACCGA AAGATAAATTAAACAATTCAGAATCTTTTAAAGAATTACAACAAGCTTATACTAAAAAAATAAAAGAAAAAGAAATAGAA ATGAAAAATTTCAATCCTCCTAATAAAGAAGATGAAAAAAATTATGATAATAAAAATAAAAGTAGTAACTCATCTGAAAT AAAAAACAAAAGCAACAATGAAAAAATTAAAGGTGAGAATTCTGATAATTTCAGCGATTTCAACCAACAAAAAGAAGATG AATCTGAAAATTCTTCTAAAAAAGAATCAACAACAAAAGTAGAATCCCCTTATTGTAACTCTAAGAATGCTGATAAAGAA ATAAAAGATGGGTATAATGAAAATCAAAATTAA
Upstream 100 bases:
>100_bases AAAAACATAGAAAATACATAATAGCGTTAGTAATAATTATTTCTGAAGACTTACCTCTTCTAAAACAATACATAAGCCCA GAAAGTGAGGTGGCAAAAAT
Downstream 100 bases:
>100_bases AAAGAAAAGGAGGTAAAATGCTATATTCAAAAAAATTGATATATTAATAATTCTTTTTGTTATACTATTGTTTACCGCAG CCTGTTCCAAAATATCTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: Regulation of sigma I protein [H]
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MKAVVVQKEKNKTYVMTEKGEFKCLKNLQNVDIGETIELNENFVAFKPIAKILIAASILLALIFTIINFKSAEVYAYVYI DINPSIEVLIDKNGKIISANPINEDGKKILKNLSYKGLDITTFINQTVEESQKLGFLKEDDAVIITTVPIKNSPIINEQI QKAINNIKKINTNVQIETLKSNETQREEAKKEKVSPGRLIIWQKAKEEGIEIPKDKLNNSESFKELQQAYTKKIKEKEIE MKNFNPPNKEDEKNYDNKNKSSNSSEIKNKSNNEKIKGENSDNFSDFNQQKEDESENSSKKESTTKVESPYCNSKNADKE IKDGYNENQN
Sequences:
>Translated_330_residues MKAVVVQKEKNKTYVMTEKGEFKCLKNLQNVDIGETIELNENFVAFKPIAKILIAASILLALIFTIINFKSAEVYAYVYI DINPSIEVLIDKNGKIISANPINEDGKKILKNLSYKGLDITTFINQTVEESQKLGFLKEDDAVIITTVPIKNSPIINEQI QKAINNIKKINTNVQIETLKSNETQREEAKKEKVSPGRLIIWQKAKEEGIEIPKDKLNNSESFKELQQAYTKKIKEKEIE MKNFNPPNKEDEKNYDNKNKSSNSSEIKNKSNNEKIKGENSDNFSDFNQQKEDESENSSKKESTTKVESPYCNSKNADKE IKDGYNENQN >Mature_330_residues MKAVVVQKEKNKTYVMTEKGEFKCLKNLQNVDIGETIELNENFVAFKPIAKILIAASILLALIFTIINFKSAEVYAYVYI DINPSIEVLIDKNGKIISANPINEDGKKILKNLSYKGLDITTFINQTVEESQKLGFLKEDDAVIITTVPIKNSPIINEQI QKAINNIKKINTNVQIETLKSNETQREEAKKEKVSPGRLIIWQKAKEEGIEIPKDKLNNSESFKELQQAYTKKIKEKEIE MKNFNPPNKEDEKNYDNKNKSSNSSEIKNKSNNEKIKGENSDNFSDFNQQKEDESENSSKKESTTKVESPYCNSKNADKE IKDGYNENQN
Specific function: Anti-sigma factor for sigI. Negatively regulates sigI activity through direct interaction [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37657; Mature: 37657
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAVVVQKEKNKTYVMTEKGEFKCLKNLQNVDIGETIELNENFVAFKPIAKILIAASILL CCCEEEEECCCCEEEEECCCCHHHHHCCCCCCCCCEEECCCCEEEHHHHHHHHHHHHHHH ALIFTIINFKSAEVYAYVYIDINPSIEVLIDKNGKIISANPINEDGKKILKNLSYKGLDI HHHHHHHCCCCCEEEEEEEEEECCCEEEEECCCCCEEECCCCCHHHHHHHHHCCCCCCCH TTFINQTVEESQKLGFLKEDDAVIITTVPIKNSPIINEQIQKAINNIKKINTNVQIETLK HHHHHHHHHHHHHCCCEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEC SNETQREEAKKEKVSPGRLIIWQKAKEEGIEIPKDKLNNSESFKELQQAYTKKIKEKEIE CCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHH MKNFNPPNKEDEKNYDNKNKSSNSSEIKNKSNNEKIKGENSDNFSDFNQQKEDESENSSK HCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHCHHHCCCH KESTTKVESPYCNSKNADKEIKDGYNENQN HHHHHHCCCCCCCCCCCCHHHHCCCCCCCC >Mature Secondary Structure MKAVVVQKEKNKTYVMTEKGEFKCLKNLQNVDIGETIELNENFVAFKPIAKILIAASILL CCCEEEEECCCCEEEEECCCCHHHHHCCCCCCCCCEEECCCCEEEHHHHHHHHHHHHHHH ALIFTIINFKSAEVYAYVYIDINPSIEVLIDKNGKIISANPINEDGKKILKNLSYKGLDI HHHHHHHCCCCCEEEEEEEEEECCCEEEEECCCCCEEECCCCCHHHHHHHHHCCCCCCCH TTFINQTVEESQKLGFLKEDDAVIITTVPIKNSPIINEQIQKAINNIKKINTNVQIETLK HHHHHHHHHHHHHCCCEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEC SNETQREEAKKEKVSPGRLIIWQKAKEEGIEIPKDKLNNSESFKELQQAYTKKIKEKEIE CCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHH MKNFNPPNKEDEKNYDNKNKSSNSSEIKNKSNNEKIKGENSDNFSDFNQQKEDESENSSK HCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHCHHHCCCH KESTTKVESPYCNSKNADKEIKDGYNENQN HHHHHHCCCCCCCCCCCCHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]