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The map label for this gene is yabB [H]

Identifier: 167038733

GI number: 167038733

Start: 61873

End: 62619

Strand: Direct

Name: yabB [H]

Synonym: Teth514_0059

Alternate gene names: 167038733

Gene position: 61873-62619 (Clockwise)

Preceding gene: 167038731

Following gene: 167038734

Centisome position: 2.52

GC content: 29.85

Gene sequence:

>747_bases
ATGCTGAGAGATGGGGAAAGATTAGATGAATTAAACTTAAAAGATTTAGTTATAATTCAACACAGGGATAAATTTAAATT
TGGGATGGATGCGGTATTGCTTGCTAATTTTGTTACTGCTAAAAAAGGAGATAAAATTGTAGATTTAGGGTGTGGAACTG
GCATAATACCTATTTTAATTGCTGCTAAAACTTATGATACATTTATTTATGGTGTTGAGATACAAGAAGATATGGCGGAT
ATGGCTACAAGAAGTGTAGTTATTAATAAAATGGAAGAAAGAATAAAAATAATAAAAGGCGATGTAAGAGGATTAGAAAA
GATATTAGGATATGAAAAATTTGATATAGTGACTTCAAATCCTCCCTATATGCCAGTAAAAACAGGATTTGATAAAAAAC
AAGAGTCAGAAAATATTGCGAGATACGAAATATATGGAGGACTTGAAGACTTTATAAAAGCTGCTTCGAAACTTTTAAAA
TTTGGAGGAAAATTCTTTATGATTCATAGAACAGAAAGATTAGTTGACATTTTGTATTTTTTAAGAAAATACAATTTAGA
ACCTAAAAAATTGAGATTTGTGCATCCTTACGTAGATAGTAAACCCAATCTTCTTCTAATAGAATCAAAAAAAGGTTCTC
AGCCAGGTTTGAATATATTGGCTCCCCTTTATGTGTATGAAAAAAGTGGGGAGTATACAAAAGAAATTATAGAAATATAC
TCTAAAGCACAATTAGAGGAGGAATAG

Upstream 100 bases:

>100_bases
CTGTGCACTACTTCAATTTTCAATACGCTATTTAAAAAAGTTAATAAAAACTTTTGATAATTGTGATAAAATAAATCAAG
AATACTATAGAGGTGATAAA

Downstream 100 bases:

>100_bases
AGATGGAGAATTCTGGGGTATTATACTTATGTCCTACTCCTATTGGTAATTTAGAAGATATAACTTTAAGAGTTTTAAAA
ACTTTAAAAGAAGTTGATAT

Product: methyltransferase small

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MLRDGERLDELNLKDLVIIQHRDKFKFGMDAVLLANFVTAKKGDKIVDLGCGTGIIPILIAAKTYDTFIYGVEIQEDMAD
MATRSVVINKMEERIKIIKGDVRGLEKILGYEKFDIVTSNPPYMPVKTGFDKKQESENIARYEIYGGLEDFIKAASKLLK
FGGKFFMIHRTERLVDILYFLRKYNLEPKKLRFVHPYVDSKPNLLLIESKKGSQPGLNILAPLYVYEKSGEYTKEIIEIY
SKAQLEEE

Sequences:

>Translated_248_residues
MLRDGERLDELNLKDLVIIQHRDKFKFGMDAVLLANFVTAKKGDKIVDLGCGTGIIPILIAAKTYDTFIYGVEIQEDMAD
MATRSVVINKMEERIKIIKGDVRGLEKILGYEKFDIVTSNPPYMPVKTGFDKKQESENIARYEIYGGLEDFIKAASKLLK
FGGKFFMIHRTERLVDILYFLRKYNLEPKKLRFVHPYVDSKPNLLLIESKKGSQPGLNILAPLYVYEKSGEYTKEIIEIY
SKAQLEEE
>Mature_248_residues
MLRDGERLDELNLKDLVIIQHRDKFKFGMDAVLLANFVTAKKGDKIVDLGCGTGIIPILIAAKTYDTFIYGVEIQEDMAD
MATRSVVINKMEERIKIIKGDVRGLEKILGYEKFDIVTSNPPYMPVKTGFDKKQESENIARYEIYGGLEDFIKAASKLLK
FGGKFFMIHRTERLVDILYFLRKYNLEPKKLRFVHPYVDSKPNLLLIESKKGSQPGLNILAPLYVYEKSGEYTKEIIEIY
SKAQLEEE

Specific function: Unknown

COG id: COG4123

COG function: function code R; Predicted O-methyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007848 [H]

Pfam domain/function: PF05175 MTS [H]

EC number: NA

Molecular weight: Translated: 28488; Mature: 28488

Theoretical pI: Translated: 8.32; Mature: 8.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRDGERLDELNLKDLVIIQHRDKFKFGMDAVLLANFVTAKKGDKIVDLGCGTGIIPILI
CCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHEE
AAKTYDTFIYGVEIQEDMADMATRSVVINKMEERIKIIKGDVRGLEKILGYEKFDIVTSN
EHEECCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
PPYMPVKTGFDKKQESENIARYEIYGGLEDFIKAASKLLKFGGKFFMIHRTERLVDILYF
CCCCCEECCCCCCHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHH
LRKYNLEPKKLRFVHPYVDSKPNLLLIESKKGSQPGLNILAPLYVYEKSGEYTKEIIEIY
HHHCCCCHHHEEEECCCCCCCCCEEEEECCCCCCCCCEEEEEEEEEECCCHHHHHHHHHH
SKAQLEEE
HHHCCCCC
>Mature Secondary Structure
MLRDGERLDELNLKDLVIIQHRDKFKFGMDAVLLANFVTAKKGDKIVDLGCGTGIIPILI
CCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHEE
AAKTYDTFIYGVEIQEDMADMATRSVVINKMEERIKIIKGDVRGLEKILGYEKFDIVTSN
EHEECCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
PPYMPVKTGFDKKQESENIARYEIYGGLEDFIKAASKLLKFGGKFFMIHRTERLVDILYF
CCCCCEECCCCCCHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHH
LRKYNLEPKKLRFVHPYVDSKPNLLLIESKKGSQPGLNILAPLYVYEKSGEYTKEIIEIY
HHHCCCCHHHEEEECCCCCCCCCEEEEECCCCCCCCCEEEEEEEEEECCCHHHHHHHHHH
SKAQLEEE
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]