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The map label for this gene is yedE [H]

Identifier: 167038719

GI number: 167038719

Start: 50478

End: 51128

Strand: Direct

Name: yedE [H]

Synonym: Teth514_0045

Alternate gene names: 167038719

Gene position: 50478-51128 (Clockwise)

Preceding gene: 167038715

Following gene: 167038720

Centisome position: 2.05

GC content: 39.02

Gene sequence:

>651_bases
ATGGAGACGGTGAAAAAAAGCAAAAAAAAGAAAAAAGTAAATCAGTTTCCTTATGGAGTCGTGCTTTTAGTGGTAATTGT
CATTGTAGGCATAATCTTATCAATGCAATCGCCCCAGTTAGCAGTTCGTTGGGCCTTTGGAATCGCCTTTGGTTTCGTTC
TTCAAAAGTCCAGATTTTGCTTTACTGCATCTTTTAGAGACCCAATTTTGACAGGTAGTACTTCAATTACCAGAGCTGTG
ATTGTAGGATTGATGATTGCCACAATAGGATTTGCCGCAATTCAGTACAATGCTTATTTAAGAGGAGAACCGATTCCTGG
AAATATCTCACCTGTTGGAATACACATAGCAATAGGAGCTACGATGTTCGGGATAGGGATGGTCATAGCTGGAGGTTGTG
CCTCAGGAACTTTGATGAGAGTTGGAGAAGGATATATGATGCAGTGGTTGTTATTAATATTCTTTATCATAGGTTCTTTA
TGGGGTGCAAGGGACTTTGGATGGTGGACTGAAATGTTTATAGCTAAATCCCCTAAAGTGTTTTTGCCAGATGTATTTGG
CTGGGGAGTCGCATTCTTTGGACAACTAATATTGTTAGGTCTACTTTTCATACTTGCAGAATGGTATGAGCATAAAAGAT
TTAATGCTTAA

Upstream 100 bases:

>100_bases
TGAAACTAATATTGTATAAGATTTTTAAATAATAAAACGCCTAAAACTTATAGTATAATACAATTGAAATGTTAAAATAA
TAACGAAGGGAGGGATTTAA

Downstream 100 bases:

>100_bases
TGCAAAAAATTAATTTTTAAGGAGGAGATTTTTATGGCAGAATACAGACTTGATTGTTTAGGAGAGGCTTGTCCAGTACC
ACTTTTGAAGACTCAAAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
METVKKSKKKKKVNQFPYGVVLLVVIVIVGIILSMQSPQLAVRWAFGIAFGFVLQKSRFCFTASFRDPILTGSTSITRAV
IVGLMIATIGFAAIQYNAYLRGEPIPGNISPVGIHIAIGATMFGIGMVIAGGCASGTLMRVGEGYMMQWLLLIFFIIGSL
WGARDFGWWTEMFIAKSPKVFLPDVFGWGVAFFGQLILLGLLFILAEWYEHKRFNA

Sequences:

>Translated_216_residues
METVKKSKKKKKVNQFPYGVVLLVVIVIVGIILSMQSPQLAVRWAFGIAFGFVLQKSRFCFTASFRDPILTGSTSITRAV
IVGLMIATIGFAAIQYNAYLRGEPIPGNISPVGIHIAIGATMFGIGMVIAGGCASGTLMRVGEGYMMQWLLLIFFIIGSL
WGARDFGWWTEMFIAKSPKVFLPDVFGWGVAFFGQLILLGLLFILAEWYEHKRFNA
>Mature_216_residues
METVKKSKKKKKVNQFPYGVVLLVVIVIVGIILSMQSPQLAVRWAFGIAFGFVLQKSRFCFTASFRDPILTGSTSITRAV
IVGLMIATIGFAAIQYNAYLRGEPIPGNISPVGIHIAIGATMFGIGMVIAGGCASGTLMRVGEGYMMQWLLLIFFIIGSL
WGARDFGWWTEMFIAKSPKVFLPDVFGWGVAFFGQLILLGLLFILAEWYEHKRFNA

Specific function: Unknown

COG id: COG2391

COG function: function code R; Predicted transporter component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0394 family [H]

Homologues:

Organism=Escherichia coli, GI1788238, Length=154, Percent_Identity=31.1688311688312, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1788323, Length=117, Percent_Identity=35.8974358974359, Blast_Score=67, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007272 [H]

Pfam domain/function: PF04143 DUF395 [H]

EC number: NA

Molecular weight: Translated: 23842; Mature: 23842

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METVKKSKKKKKVNQFPYGVVLLVVIVIVGIILSMQSPQLAVRWAFGIAFGFVLQKSRFC
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCEE
FTASFRDPILTGSTSITRAVIVGLMIATIGFAAIQYNAYLRGEPIPGNISPVGIHIAIGA
EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCEEEEEEHHH
TMFGIGMVIAGGCASGTLMRVGEGYMMQWLLLIFFIIGSLWGARDFGWWTEMFIAKSPKV
HHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCE
FLPDVFGWGVAFFGQLILLGLLFILAEWYEHKRFNA
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
METVKKSKKKKKVNQFPYGVVLLVVIVIVGIILSMQSPQLAVRWAFGIAFGFVLQKSRFC
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCEE
FTASFRDPILTGSTSITRAVIVGLMIATIGFAAIQYNAYLRGEPIPGNISPVGIHIAIGA
EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCEEEEEEHHH
TMFGIGMVIAGGCASGTLMRVGEGYMMQWLLLIFFIIGSLWGARDFGWWTEMFIAKSPKV
HHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCE
FLPDVFGWGVAFFGQLILLGLLFILAEWYEHKRFNA
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8371104; 9097040; 9278503 [H]