Click here to switch to the map view.

The map label for this gene is recR [H]

Identifier: 167038709

GI number: 167038709

Start: 39877

End: 40476

Strand: Direct

Name: recR [H]

Synonym: Teth514_0035

Alternate gene names: 167038709

Gene position: 39877-40476 (Clockwise)

Preceding gene: 167038708

Following gene: 167038710

Centisome position: 1.62

GC content: 36.5

Gene sequence:

>600_bases
ATGAACTATTATTCTACTTCTATAGCGAAGCTTATAGAAGAACTGTCAAAGTTGCCTGGTGTAGGCCCTAAAACAGCACA
AAGGCTTGCTTTTTTCATAATAAACATGCCTTTAGAAGAGGTAAAAAGCTTGTCTCAAGCGATTATTGATGCAAAAGAAA
AGATAAAGTATTGTAGAATTTGTTATAACATAACTGACACAGAGGTTTGTAACATATGTAGTGATAAAGAAAGAGATCAT
TCTCTTATATGTGTTGTTTCTCATCCTATGGATGTTGTCGCAATGGAGAAAATACGAGAATATAAAGGAGTGTATCATGT
ACTTCATGGTGTTATTTCTCCGATAGAAGGCGTTGGCCCTGAAGATATAAAAATTAAAGAACTTTTAGACAGAGTAAAAA
ATGGAAATGTAAAAGAAGTCATACTTGCTACAAATCCTGACATAGAGGGAGAAGCGACAGCAATGTACATTGCTAAGCTA
TTAAAACCGTTAGGAATAAAAGTCACAAGGATTGCTCATGGGGTGCCGGTAGGCGGTGACCTGGAATACACCGATGTTGT
AACTCTTTCAAGGGCTCTTGAAGGTAGAAGGGAATTGTAA

Upstream 100 bases:

>100_bases
GGTTAATCAAGCGTTAAGGAATGCAGAAGAAATGATTGCTTCTGAAATGGCAAAGATAACCGGAGGATTAAACATTCCTG
GACTGTTTTGAGGTGAAAAA

Downstream 100 bases:

>100_bases
AAGGTATTGCATTTTCATTTGTAGTTTATTATAATAAATTTGTGATAAATACCATAAGGCGATGGAGCTCGCCATAAATG
CGGAACGCTGATGGCTCCTA

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MNYYSTSIAKLIEELSKLPGVGPKTAQRLAFFIINMPLEEVKSLSQAIIDAKEKIKYCRICYNITDTEVCNICSDKERDH
SLICVVSHPMDVVAMEKIREYKGVYHVLHGVISPIEGVGPEDIKIKELLDRVKNGNVKEVILATNPDIEGEATAMYIAKL
LKPLGIKVTRIAHGVPVGGDLEYTDVVTLSRALEGRREL

Sequences:

>Translated_199_residues
MNYYSTSIAKLIEELSKLPGVGPKTAQRLAFFIINMPLEEVKSLSQAIIDAKEKIKYCRICYNITDTEVCNICSDKERDH
SLICVVSHPMDVVAMEKIREYKGVYHVLHGVISPIEGVGPEDIKIKELLDRVKNGNVKEVILATNPDIEGEATAMYIAKL
LKPLGIKVTRIAHGVPVGGDLEYTDVVTLSRALEGRREL
>Mature_199_residues
MNYYSTSIAKLIEELSKLPGVGPKTAQRLAFFIINMPLEEVKSLSQAIIDAKEKIKYCRICYNITDTEVCNICSDKERDH
SLICVVSHPMDVVAMEKIREYKGVYHVLHGVISPIEGVGPEDIKIKELLDRVKNGNVKEVILATNPDIEGEATAMYIAKL
LKPLGIKVTRIAHGVPVGGDLEYTDVVTLSRALEGRREL

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO [H]

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain [H]

Homologues:

Organism=Escherichia coli, GI1786678, Length=193, Percent_Identity=46.6321243523316, Blast_Score=183, Evalue=5e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011257
- InterPro:   IPR000445
- InterPro:   IPR003583
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967 [H]

Pfam domain/function: PF00633 HHH; PF02132 RecR; PF01751 Toprim [H]

EC number: NA

Molecular weight: Translated: 22136; Mature: 22136

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYYSTSIAKLIEELSKLPGVGPKTAQRLAFFIINMPLEEVKSLSQAIIDAKEKIKYCRI
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
CYNITDTEVCNICSDKERDHSLICVVSHPMDVVAMEKIREYKGVYHVLHGVISPIEGVGP
HCCCCHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
EDIKIKELLDRVKNGNVKEVILATNPDIEGEATAMYIAKLLKPLGIKVTRIAHGVPVGGD
CCCCHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCC
LEYTDVVTLSRALEGRREL
CCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNYYSTSIAKLIEELSKLPGVGPKTAQRLAFFIINMPLEEVKSLSQAIIDAKEKIKYCRI
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
CYNITDTEVCNICSDKERDHSLICVVSHPMDVVAMEKIREYKGVYHVLHGVISPIEGVGP
HCCCCHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
EDIKIKELLDRVKNGNVKEVILATNPDIEGEATAMYIAKLLKPLGIKVTRIAHGVPVGGD
CCCCHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCC
LEYTDVVTLSRALEGRREL
CCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA