| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is lepB [H]
Identifier: 167038702
GI number: 167038702
Start: 30895
End: 31425
Strand: Direct
Name: lepB [H]
Synonym: Teth514_0027
Alternate gene names: 167038702
Gene position: 30895-31425 (Clockwise)
Preceding gene: 167038698
Following gene: 167038703
Centisome position: 1.26
GC content: 32.02
Gene sequence:
>531_bases ATGAGCAAAAACATAAAAAAGGAAATATTAAGCTGGATATTTACTATAGCTCTTGCTTTTTTGATTGCACTGTTTATAAG GACTTATGTTTTTGAATTGGTAGATGTACCCACAGGTTCAATGTTAAATACTATTCAAATAAATGATAAATTCATTGTAA ACAAGTTTATATACAGGTTTGAACCTGTAAAACGAGGAGATATTGTAGTATTTCGCTTTCCTGACGACCCAAAAGTTAAT TTTGTAAAAAGAGTTATTGGCATTGGTGGAGATGTGATTGAAATAAAAAATGGTCAGTTAATAAGAAATGGAAAAGTAGT TAAGGAGCCCTATATAAAAGAACCTATGAAAGGCAATTTTGGACCATATGTCGTTCCACCGGGTCATTATTTTATGTTAG GTGATAATAGAAATGAGTCTATGGACAGTAGATTTTGGCAGCACAAGTATGTATCAAAAGACCAAATTTTGGGCAAAATA GTTTTTAGAATTTGGCCTCCTGATCGAATTGGTTCTATGTCTGGAAAATAG
Upstream 100 bases:
>100_bases TGACATATATTAGAAAAATATGCATACAAAATAAAAAAATTAGAATTTGTTTGAAGTTTATGCTATAATATCACTGTACT TTTAAGTGAGGAGAGAAAAT
Downstream 100 bases:
>100_bases TTATTGAAAGTAGTGTTATAAAGTAGTATAATATTAAAAAACATAATATTGTCGGCAATGAAGGGACGAGTAGTAAGTAT AAACTTTTAAGAGAGCTGGT
Product: signal peptidase I
Products: NA
Alternate protein names: SPase I; Leader peptidase I [H]
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MSKNIKKEILSWIFTIALAFLIALFIRTYVFELVDVPTGSMLNTIQINDKFIVNKFIYRFEPVKRGDIVVFRFPDDPKVN FVKRVIGIGGDVIEIKNGQLIRNGKVVKEPYIKEPMKGNFGPYVVPPGHYFMLGDNRNESMDSRFWQHKYVSKDQILGKI VFRIWPPDRIGSMSGK
Sequences:
>Translated_176_residues MSKNIKKEILSWIFTIALAFLIALFIRTYVFELVDVPTGSMLNTIQINDKFIVNKFIYRFEPVKRGDIVVFRFPDDPKVN FVKRVIGIGGDVIEIKNGQLIRNGKVVKEPYIKEPMKGNFGPYVVPPGHYFMLGDNRNESMDSRFWQHKYVSKDQILGKI VFRIWPPDRIGSMSGK >Mature_175_residues SKNIKKEILSWIFTIALAFLIALFIRTYVFELVDVPTGSMLNTIQINDKFIVNKFIYRFEPVKRGDIVVFRFPDDPKVNF VKRVIGIGGDVIEIKNGQLIRNGKVVKEPYIKEPMKGNFGPYVVPPGHYFMLGDNRNESMDSRFWQHKYVSKDQILGKIV FRIWPPDRIGSMSGK
Specific function: Unknown
COG id: COG0681
COG function: function code U; Signal peptidase I
Gene ontology:
Cell location: Cell membrane; Single-pass type II membrane protein (Potential) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S26 family [H]
Homologues:
Organism=Escherichia coli, GI1788921, Length=97, Percent_Identity=38.1443298969072, Blast_Score=71, Evalue=4e-14, Organism=Saccharomyces cerevisiae, GI6323800, Length=156, Percent_Identity=32.6923076923077, Blast_Score=62, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000223 - InterPro: IPR019758 - InterPro: IPR019757 - InterPro: IPR019756 - InterPro: IPR019759 - InterPro: IPR015927 - InterPro: IPR011056 [H]
Pfam domain/function: PF00717 Peptidase_S24 [H]
EC number: =3.4.21.89 [H]
Molecular weight: Translated: 20388; Mature: 20257
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: PS00760 SPASE_I_2 ; PS00761 SPASE_I_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKNIKKEILSWIFTIALAFLIALFIRTYVFELVDVPTGSMLNTIQINDKFIVNKFIYRF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHC EPVKRGDIVVFRFPDDPKVNFVKRVIGIGGDVIEIKNGQLIRNGKVVKEPYIKEPMKGNF CCCCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCCEEEECCCEECCCCCCCCCCCCC GPYVVPPGHYFMLGDNRNESMDSRFWQHKYVSKDQILGKIVFRIWPPDRIGSMSGK CCEEECCCCEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHEEECCCHHCCCCCCC >Mature Secondary Structure SKNIKKEILSWIFTIALAFLIALFIRTYVFELVDVPTGSMLNTIQINDKFIVNKFIYRF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHC EPVKRGDIVVFRFPDDPKVNFVKRVIGIGGDVIEIKNGQLIRNGKVVKEPYIKEPMKGNF CCCCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCCEEEECCCEECCCCCCCCCCCCC GPYVVPPGHYFMLGDNRNESMDSRFWQHKYVSKDQILGKIVFRIWPPDRIGSMSGK CCEEECCCCEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHEEECCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7865790 [H]