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Identifier: 165933497

GI number:

Start: 862694

End: 866062

Strand: Reverse

Name: Not Available

Synonym: RrIowa_1085

Alternate gene names: NA

Gene position: NA

Preceding gene: 165933498

Following gene: 165933496

Centisome position: NA

GC content: NA

Gene sequence:

>3369_bases
ATGTTACAACAAAAATTTCCGGCGGCTGCCAAATCTTTCTTTGCAATTGATAATTTTACTAAGAATCTTAAGCAAGATTT
CATCTTGAGTGCGAGTAATGAAGAGGAGGCGTTGCAATTATACAAGCAAGCTTTATTTTTTTCTTCTAATGAAAATATTT
ATTACTTTCCAAGCTATAATACCATCCCTTATGACCATACGTCACCAAATGCAAATATCTTATCTAGACGTGCAGAAACA
TTAATCAAGCTAACAACAAATAATAGTAATAGCAACAAATTACTCATCACTCATACAGCGAACTTATTAAACAAATTACC
GCCGAAAGATTTTTTTTCTAAATATTTTTTGAAATTATCCCCTAAAATGAAATTTACTACGGATGAGCTTGCTATGTTTC
TAGTAGAAAATTGTTTTACAAGAAATGCGAGTAGCATCGATGCTGGGGAATTTGCGGTTAGAGGCGAAATCATTGATATA
ATATTGTCCGGTCCTAAAGCTTATAGAATTCATTTTAGTTGGGGTTATATTGAATCAATCAAAGAATTTGATATTGATAC
GCAAATTTCGACTAAATCCTGCAGGGAGCTTATTATTAGTCCTGCAAATGAGATAGTTTTAAATAGTGAAACTATAGGTA
ATTTTAAGAATAATTACTTACGAAATTTTGGAGTTAATCATACTGATAATGCTTTATATAAGGCGGTAATATCTGGAAGA
AAATTCACAGGATATGAACAATTACTCCCATTATTTTACGATTCCTGCTCTAACTTAATAGATTATTTAAACGATCCTAT
TTTCATATTCGATAATTTGTCAAAACAAGCCATTTTAGAATTTGAACATAGTTATAACGATTTTTATTCGGCAAGGTCAG
AGGCAAATAAACTTAAATTTAATAGTTTTTATCCCACCCTTTCACCGACTAGCTTATATTTTACCGCTTCTGAAATAACG
GAATTACTAGAACAAAACAATAATATACTACTTACTTTTGAAAACTCAGAGCAAGCTAGCTTAATTGAAAATATCGCTGC
TACAAGTTTTATAGAAAAGAAAACGGTTTTCGATAAATTATTTGAGGTTATTAAAGCAAATTCTCATAAGAAAATTATTA
TAGGCTCAAGCGTTTTAAGTAGTTTTGAGCGAATCAAAAGCATAATTCAAAATTATGAATATAAATATAATGAGATAAAT
AAATTAGATGAGGCTAAGGCTTCAATAATAAATGTCGCGATAATTCCTTTAAATCAAAGCTTTTATACGAAAGAATATTT
ATTTATTACCGCTAGCGAATTATTAGAAGAAAAACCTAGCTCTACAAACACTAACAAAAAACTTAAAAATATCTTGCTGG
AGCTTGATAATTTAGCTGAAGGCGAATTTGTTGTTCACAAAGATCATGGAATAGGGCAGTTTTTAAAGCTAGAAGCTTTA
GAAATCAAAGGCAAACCACATGATTTTTTAAAGATTTTATATGCCGGCAATGATAAATTATATATACCAGTTGAAAGTAT
AGAGGTAATAAAAAAATACGGCAATGATAATGCGGTGCTTGATAAGCTTGGTAGCGTTGCATGGCAAAGAAGTAAGGCAA
AGCTTAAAAAGCGTATAAAAGAGATAGCACTGCATTTAATACAAATAGCAGCTAAAAGGAAACTTAATAGTAGTGCTTCC
GTTGAATTTGACCTTGAAGAATATGATAAATTTTGTGCTAATTTTCCTTTCAGCGAAACGGAAGACCAATTAATCGCTAT
AAACGATATTAAAGAAGATCTAAGAAACGGTATGTTAATGGATAGGTTAATATGCGGTGATGTCGGGTTTGGTAAAACAG
AGGTAGCAATGCGTGCCGTCTTTATGGTAGCAAAATCTCTAAATGAACATTTACCTCAAGTAGCAGTAGTTGTACCGACA
ACTATTTTATGTAGTCAACATTTTTCAAGGTTCATAGAAAGGTTCAAAGGTTTTGGTTTAAATATCAAGCAATTATCTAG
CGTTATTAGTTCTAAAGAAGCAAAAATTATAAGATCGGAGCTTGAAAGCGGTAAAATAAATATAATAATAGGCACTCATT
CTTTATTACATAAAAATATAAAATTCTTTAATTTGAAATTGTTAATAATCGATGAAGAACAACATTTCGGTGTCGGTCAA
AAAGAATTTCTTAAATCGCTAAAATCCTCTTCCCATGTACTTGCAATGTCGGCAACACCGATTCCTCGAACGCTGCAAAT
GTCAATGACCGGTTTAAAAGAACTTAGCATTATTGCAACGCCGCCTCTAAACAGGCTGGAAGTTCATACCTCGGTTATGC
CGTTTGATCCCGTTATTATCAGAGATGCATTATTACGCGAACATTTTAGAGGCGGAAGAAGTTTTTATGTAGTTCCAAGA
ATTAAAGATATAGAGGATATCGCAAAACAATTAAAACAAATCGTGCCGGAATTAAGCTATAAAATAGCTTACGGAAAAAT
GACTCCGAGTAAAATTGATGAGGTTATGAGCGAGTTTTATGCCGGCAAATTCGATATACTAGTCTCAACTACTATTATAG
AATCAGGAATTGATATAGCCGAGGCAAATACCATGATCATACATAATGCTGATATGCTGGGTCTTAGTCAGCTATATCAA
TTGCGTGGTCGAATAGGTCGAGGTAAAATGCGGGGTTATGTCTATCTAACGGTAGCAAGTCATAAAAAGATGACATCGCA
CTCCTTAAGATGCTTAGAGATAATACAAAATAGTTGTGCTTTGGGCTCAGGTTTTACTATTGCAAGCCGTGATATGGATT
TACGAGGTTTCGGTAATTTGATAGGTGAAGAACAATCAGGACAAATTAAAGAAGTAGGTACAGAACTATATCAAGAAATG
CTGGAAGAACAAATAGCTATTTTTAAAGATGAACCGATTGTTTCAGAACAACCCTTTATCCCGACTATTAATTTGGGATT
ATCCGTCTTTATTCCAGATAATTATGTAGCAGATGCAGCTCTTAAACTTGGACTATATAGAAGAATAGGTAATTTAAGTA
ATGAGATAGAAGTAGAGACATTTAAAGATGAGATGATTGATAGATTCGGTTTACTACCGATTGAATTTAATAATTTACTT
GATATTGTAAAAATAAAACTATTATGCTTTAAGTTAAATATTGAAAATCTAGATTCAGGAGATAACGGATTTGTGATTAA
ATTTTATAAAAATGCCGATATGACTGATAAAATTTTAAAATTCGTTAGTACTTACTCTAATCAGGCAAAAATCAAACCAG
ATAATAAATTAGTATATATCAAGCAATTAGTAGATAAAAATATAATTGTTGAGGCAAATCAACTACTTTGGAATTTATCG
GAGATGTAG

Upstream 100 bases:

>100_bases
TTTATAATTGGATTAATAATAAATCTTCTGCTCCTTCTTATCTAGATGCCGAAATAATTGATAAATTACACAAAATAGCA
AAAATATAAACTCCTGTAGA

Downstream 100 bases:

>100_bases
ACTCGATGTCATTCCTGCTCTGTCATTGCAAGCAGCCGTAGGCTGCGTGGCAATCTCATGAAATAATAACAAACTCCTGA
GATTGCTTCGTCAATTGCTA

Product: transcription-repair coupling factor

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1122_residues
MLQQKFPAAAKSFFAIDNFTKNLKQDFILSASNEEEALQLYKQALFFSSNENIYYFPSYNTIPYDHTSPNANILSRRAET
LIKLTTNNSNSNKLLITHTANLLNKLPPKDFFSKYFLKLSPKMKFTTDELAMFLVENCFTRNASSIDAGEFAVRGEIIDI
ILSGPKAYRIHFSWGYIESIKEFDIDTQISTKSCRELIISPANEIVLNSETIGNFKNNYLRNFGVNHTDNALYKAVISGR
KFTGYEQLLPLFYDSCSNLIDYLNDPIFIFDNLSKQAILEFEHSYNDFYSARSEANKLKFNSFYPTLSPTSLYFTASEIT
ELLEQNNNILLTFENSEQASLIENIAATSFIEKKTVFDKLFEVIKANSHKKIIIGSSVLSSFERIKSIIQNYEYKYNEIN
KLDEAKASIINVAIIPLNQSFYTKEYLFITASELLEEKPSSTNTNKKLKNILLELDNLAEGEFVVHKDHGIGQFLKLEAL
EIKGKPHDFLKILYAGNDKLYIPVESIEVIKKYGNDNAVLDKLGSVAWQRSKAKLKKRIKEIALHLIQIAAKRKLNSSAS
VEFDLEEYDKFCANFPFSETEDQLIAINDIKEDLRNGMLMDRLICGDVGFGKTEVAMRAVFMVAKSLNEHLPQVAVVVPT
TILCSQHFSRFIERFKGFGLNIKQLSSVISSKEAKIIRSELESGKINIIIGTHSLLHKNIKFFNLKLLIIDEEQHFGVGQ
KEFLKSLKSSSHVLAMSATPIPRTLQMSMTGLKELSIIATPPLNRLEVHTSVMPFDPVIIRDALLREHFRGGRSFYVVPR
IKDIEDIAKQLKQIVPELSYKIAYGKMTPSKIDEVMSEFYAGKFDILVSTTIIESGIDIAEANTMIIHNADMLGLSQLYQ
LRGRIGRGKMRGYVYLTVASHKKMTSHSLRCLEIIQNSCALGSGFTIASRDMDLRGFGNLIGEEQSGQIKEVGTELYQEM
LEEQIAIFKDEPIVSEQPFIPTINLGLSVFIPDNYVADAALKLGLYRRIGNLSNEIEVETFKDEMIDRFGLLPIEFNNLL
DIVKIKLLCFKLNIENLDSGDNGFVIKFYKNADMTDKILKFVSTYSNQAKIKPDNKLVYIKQLVDKNIIVEANQLLWNLS
EM

Sequences:
NA

Specific function: NA

COG id: COG1197

COG function: function code LK; Transcription-repair coupling factor (superfamily II helicase)

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA