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Identifier: 16519738

GI number: 16519738

Start: 472243

End: 473952

Strand: Direct

Name: Not Available

Synonym: NGR_a03680

Alternate gene names: 16519738

Gene position: 472243-473952 (Clockwise)

Preceding gene: 16519739

Following gene: 16519737

Centisome position: 88.08

GC content: 62.57

Gene sequence:

>1710_bases
ATGAGCCGATCCACCCGCCTGGACCGTGTTTTTTACTGGCTCGGCTTGATCGTGATTGCCTGGGCCGTGCTGACCTTCCT
TCTCGTTCCGATGCTTGCTGCCTTGCAGGCCGCGTTGTTCAGGCTCGGCAGTTTGGCCATGTTTGATGCGGTATCGGAAC
TCGCACGCTCTCGCCGCGTCCGCGCAGCGCTTTGGAACACGGTTTGGATGACGGCGGCGACCACCCTCACCGTCACGATC
GTCGGTATGTTCCAGGTGGCGGTGCTCGAGTATTTTCGCGTGCCGGGGCGTGGCTTTCTGAAAATCGCCTTCTCCACGCC
GCTCGTCTTCGGCGGCGTCGTTGCGGCTGCCGGCTACAACTTCACCTATGGTCCGAGCGGTGCCATCACTGCTGCTTTGG
CCGCGCTCTTCCCGTCGCTGCCGCGCGATTGGTTCATCGGCTGGTTTGGGGTTCTCTTCGCCCACACTTTTCTGATGACC
AGCTTTCACTTCCTGTTTCTGCGCGCCGCCATGCGCCGCGTCGACTATTCGACGATCGAGGCGGCCCGTAGCATGGGAGC
CTCGGAAATGACGATTCTGCGGTGCGTCGTCCTGCCGGTCATCCTGCCAACCGTGCTCGCGGTTACGCTGCTCACGCTGA
TTACGGCGATGGGTTCCTTTGCCGCGCCCCAGGTGCTCGGCGGCCGGGACTTCCACATGCTGAGCCAGATGGTCCTGACG
CTGAACAGCTTGCGCCGGCCAGACATGGCGGCGCTGCTGGCGCTGTTGATGGGGCTTGTGCTCATGGGGCTGATCCTGCT
GTCGCAGTATTTCGAGGCCAAGGGCGCCTATACGGCCGGCGCTAAGGCGACAACACGCATCCAGTTGCGGGCGATACGCA
ATCCGCTTGCCCGTATCGTGGTGACCGCGCTGGCCTATTTGCTGGCAGCGATCTACCTGATGCCGGTCGCGCTCATTGTG
CTGTTCTCCTTCGCCCCGGCTTCGAGCATCGGCATCGACGTCCTGCCTTCCAGCTTCACGCTGGCAAACTACGCTCGGGT
GCTGGGCGGCGGCGCGGCCTTTGTCCCCTTCTTCAATTCGATGTTGATGAGCTCGATCGCGGTTGCCGTCGGCCTCGCCA
TCACTTTGTTTGCCGTGCCGATCATGGTGCGCAAGCGCAACTGGCTGACGCGAGGCCTGGATATCTGCTTTGTCCTGCCT
TGGATCATCCCCACCATGCTGCTTGCCGTAGGGCTGATCGTTGCTTTCGATGCGCCCAATCCGCTCGTCGGCAATCTCGT
TCTGCTCGGCAGCTATTGGCTTTTGCCGATCGGCTACGTCATCTTCAGCCTGCCGCTCATGGTCCGCTTCATGCGCTCGG
CCTTCATCGGGATCGATCCGGCCTTCGACGAAGCGGCCCGGGCAATGGGCGCCTCGGGGCCGTATCGGCTCCGCCGTGTT
GTCCTGCCGCTCGTGGCGCCGACCGCAATCCTGGTCGCCGGCATGAAGTTCAACAATCTGCTGGCGGAATACCCGCTCTC
GGCCTTCCTTTACAACGTCAACAACAAGCCTCTGCCGATCGCCATCGTCGATGGCGCAGTTTCGGCCGATCCCGACCAGG
CCGCCGTCAGTCTCGTCTACGTGACCCTGATCATGGCCTTCTCGCTGGCCGTCATCCTCATCGCCGAGCGCCTGAGCCTC
GGCCGCACCCCGGAATCGAGCAACCTCTGA

Upstream 100 bases:

>100_bases
TTTCGGCAATGCTGATCGGCGACCAGCTTCCTGAACCCGGCAGTACCGTCTCGCTCGGAATTCGCCCCGGCGCCGCGCAT
GTGTTCCAGGAGGTGACCGG

Downstream 100 bases:

>100_bases
ATGGACACTGAAATGGATACTTGCATCACCGTCTGGCATTGGCCCACCCATGAACGCTGGTACGACGAGGGCATCCGCCA
CTCCCTCGACCTGATCCGTG

Product: ABC transporter permease

Products: ADP; phosphate; putrescine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 569; Mature: 568

Protein sequence:

>569_residues
MSRSTRLDRVFYWLGLIVIAWAVLTFLLVPMLAALQAALFRLGSLAMFDAVSELARSRRVRAALWNTVWMTAATTLTVTI
VGMFQVAVLEYFRVPGRGFLKIAFSTPLVFGGVVAAAGYNFTYGPSGAITAALAALFPSLPRDWFIGWFGVLFAHTFLMT
SFHFLFLRAAMRRVDYSTIEAARSMGASEMTILRCVVLPVILPTVLAVTLLTLITAMGSFAAPQVLGGRDFHMLSQMVLT
LNSLRRPDMAALLALLMGLVLMGLILLSQYFEAKGAYTAGAKATTRIQLRAIRNPLARIVVTALAYLLAAIYLMPVALIV
LFSFAPASSIGIDVLPSSFTLANYARVLGGGAAFVPFFNSMLMSSIAVAVGLAITLFAVPIMVRKRNWLTRGLDICFVLP
WIIPTMLLAVGLIVAFDAPNPLVGNLVLLGSYWLLPIGYVIFSLPLMVRFMRSAFIGIDPAFDEAARAMGASGPYRLRRV
VLPLVAPTAILVAGMKFNNLLAEYPLSAFLYNVNNKPLPIAIVDGAVSADPDQAAVSLVYVTLIMAFSLAVILIAERLSL
GRTPESSNL

Sequences:

>Translated_569_residues
MSRSTRLDRVFYWLGLIVIAWAVLTFLLVPMLAALQAALFRLGSLAMFDAVSELARSRRVRAALWNTVWMTAATTLTVTI
VGMFQVAVLEYFRVPGRGFLKIAFSTPLVFGGVVAAAGYNFTYGPSGAITAALAALFPSLPRDWFIGWFGVLFAHTFLMT
SFHFLFLRAAMRRVDYSTIEAARSMGASEMTILRCVVLPVILPTVLAVTLLTLITAMGSFAAPQVLGGRDFHMLSQMVLT
LNSLRRPDMAALLALLMGLVLMGLILLSQYFEAKGAYTAGAKATTRIQLRAIRNPLARIVVTALAYLLAAIYLMPVALIV
LFSFAPASSIGIDVLPSSFTLANYARVLGGGAAFVPFFNSMLMSSIAVAVGLAITLFAVPIMVRKRNWLTRGLDICFVLP
WIIPTMLLAVGLIVAFDAPNPLVGNLVLLGSYWLLPIGYVIFSLPLMVRFMRSAFIGIDPAFDEAARAMGASGPYRLRRV
VLPLVAPTAILVAGMKFNNLLAEYPLSAFLYNVNNKPLPIAIVDGAVSADPDQAAVSLVYVTLIMAFSLAVILIAERLSL
GRTPESSNL
>Mature_568_residues
SRSTRLDRVFYWLGLIVIAWAVLTFLLVPMLAALQAALFRLGSLAMFDAVSELARSRRVRAALWNTVWMTAATTLTVTIV
GMFQVAVLEYFRVPGRGFLKIAFSTPLVFGGVVAAAGYNFTYGPSGAITAALAALFPSLPRDWFIGWFGVLFAHTFLMTS
FHFLFLRAAMRRVDYSTIEAARSMGASEMTILRCVVLPVILPTVLAVTLLTLITAMGSFAAPQVLGGRDFHMLSQMVLTL
NSLRRPDMAALLALLMGLVLMGLILLSQYFEAKGAYTAGAKATTRIQLRAIRNPLARIVVTALAYLLAAIYLMPVALIVL
FSFAPASSIGIDVLPSSFTLANYARVLGGGAAFVPFFNSMLMSSIAVAVGLAITLFAVPIMVRKRNWLTRGLDICFVLPW
IIPTMLLAVGLIVAFDAPNPLVGNLVLLGSYWLLPIGYVIFSLPLMVRFMRSAFIGIDPAFDEAARAMGASGPYRLRRVV
LPLVAPTAILVAGMKFNNLLAEYPLSAFLYNVNNKPLPIAIVDGAVSADPDQAAVSLVYVTLIMAFSLAVILIAERLSLG
RTPESSNL

Specific function: Probably part of the binding-protein-dependent transport system y4fNOP. Probably responsible for the translocation of the substrate across the membrane

COG id: COG1178

COG function: function code P; ABC-type Fe3+ transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transmembrane type-1 domains

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4FN_RHISN (P55452)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_443858.1
- ProteinModelPortal:   P55452
- SMR:   P55452
- GeneID:   962304
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a03680
- HOGENOM:   HBG532390
- ProtClustDB:   CLSK2301968
- InterPro:   IPR000515

Pfam domain/function: PF00528 BPD_transp_1

EC number: NA

Molecular weight: Translated: 61584; Mature: 61453

Theoretical pI: Translated: 10.61; Mature: 10.61

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xb814a38)-; HASH(0xc806da8)-; HASH(0xb495454)-; HASH(0x9707260)-; HASH(0xb8061e8)-; HASH(0xc7da908)-; HASH(0xc806ec8)-; HASH(0xc3860a4)-; HASH(0xbdf03dc)-; HASH(0xc30a670)-; HASH(0x403a7c1c)-; HASH(0xad94800)-; HASH(0xbf5da9c)-;

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHCCCCCCCCCH
>Mature Secondary Structure 
SRSTRLDRVFYWLGLIVIAWAVLTFLLVPMLAALQAALFRLGSLAMFDAVSELARSRRV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAALWNTVWMTAATTLTVTIVGMFQVAVLEYFRVPGRGFLKIAFSTPLVFGGVVAAAGYN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCC
FTYGPSGAITAALAALFPSLPRDWFIGWFGVLFAHTFLMTSFHFLFLRAAMRRVDYSTIE
CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
AARSMGASEMTILRCVVLPVILPTVLAVTLLTLITAMGSFAAPQVLGGRDFHMLSQMVLT
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHH
LNSLRRPDMAALLALLMGLVLMGLILLSQYFEAKGAYTAGAKATTRIQLRAIRNPLARIV
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
VTALAYLLAAIYLMPVALIVLFSFAPASSIGIDVLPSSFTLANYARVLGGGAAFVPFFNS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHCCCHHHHHHHHH
MLMSSIAVAVGLAITLFAVPIMVRKRNWLTRGLDICFVLPWIIPTMLLAVGLIVAFDAPN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PLVGNLVLLGSYWLLPIGYVIFSLPLMVRFMRSAFIGIDPAFDEAARAMGASGPYRLRRV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHH
VLPLVAPTAILVAGMKFNNLLAEYPLSAFLYNVNNKPLPIAIVDGAVSADPDQAAVSLVY
HHHHHHHHHHHHHCCHHHHHHHHCCHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHH
VTLIMAFSLAVILIAERLSLGRTPESSNL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; putrescine [Periplasm]; H2O [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424