Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 16519725

GI number: 16519725

Start: 489499

End: 490164

Strand: Direct

Name: Not Available

Synonym: NGR_a03810

Alternate gene names: NA

Gene position: 489499-490164 (Clockwise)

Preceding gene: 16519726

Following gene: 16519724

Centisome position: 91.3

GC content: 63.06

Gene sequence:

>666_bases
ATGGAGGCCCACATGCCCGCAGTTGCGGAAATGCTGAAGGCGAGCGAGGCTGCCGTCGTCTCGCGCGTGAGCCTACGCGA
CGTCAATCGCGTCATCGATGAGCATATTCTGCCAGAAGCCTTCGTGTCGCTTGACAACGGTCGCCATGTCCTGGCCGGGG
CCTGCTCCCTCATCGCCTTCTATTTCGAGAGCGCCCGCCGTCTCACCTCGGAAGAGCGGCTGTTTGCCATCCGGATAGCA
GAGGGTCGACTGGCAAGAGCGCGTACGCTCCCTTGGTCCGCCCTGTTGCGCGAGGACTGGACCGTGCACCACGAGTTTCT
GACGATCGATCTTATGCCCTTTATGAGAGGTGCGAGCGAACGACTGGACGACCTTGCCGCAGCACGAGAGATCGTCACAT
CCTCGCCCGACATCCTTGGCGGTACGCCTGTCGTCCGGGGCACCCGCGTTCCGGTCTATGATGTTGCCGCATCCGTAGCT
GCCGGTCATTCGGTGGAGCGCATGCTGGAGGCCTGGCCTAGCCTGGACGCGGAAAAGATAAGGCTTGCCTCAATCTACGC
GGAAGCGAACCCCTTGCGCGGCCGGCGCCGCGTCTTCGGCGACCTTCCCGAAGGCTCGGTCATCGTCTCAGATCGTCGCG
TCGCCCGTCGCAGGAAGACGGGATGA

Upstream 100 bases:

>100_bases
GTCGCACGCGCCCCACCATCAGGCGATGCCTACCCATTCGTCTTCAAGACCTTGATATGACCACCTGCACATTATATATT
CCGACGGATCGGAGCATTAT

Downstream 100 bases:

>100_bases
AGTTTCTCATCGATGAGTGTCTCAGTCCTGAACTGGCAAAAATGGCTATCGAAAAAGGCCACGGCGAAACAAGCCATGTC
GTCTGGATGAAACTGGGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MEAHMPAVAEMLKASEAAVVSRVSLRDVNRVIDEHILPEAFVSLDNGRHVLAGACSLIAFYFESARRLTSEERLFAIRIA
EGRLARARTLPWSALLREDWTVHHEFLTIDLMPFMRGASERLDDLAAAREIVTSSPDILGGTPVVRGTRVPVYDVAASVA
AGHSVERMLEAWPSLDAEKIRLASIYAEANPLRGRRRVFGDLPEGSVIVSDRRVARRRKTG

Sequences:

>Translated_221_residues
MEAHMPAVAEMLKASEAAVVSRVSLRDVNRVIDEHILPEAFVSLDNGRHVLAGACSLIAFYFESARRLTSEERLFAIRIA
EGRLARARTLPWSALLREDWTVHHEFLTIDLMPFMRGASERLDDLAAAREIVTSSPDILGGTPVVRGTRVPVYDVAASVA
AGHSVERMLEAWPSLDAEKIRLASIYAEANPLRGRRRVFGDLPEGSVIVSDRRVARRRKTG
>Mature_221_residues
MEAHMPAVAEMLKASEAAVVSRVSLRDVNRVIDEHILPEAFVSLDNGRHVLAGACSLIAFYFESARRLTSEERLFAIRIA
EGRLARARTLPWSALLREDWTVHHEFLTIDLMPFMRGASERLDDLAAAREIVTSSPDILGGTPVVRGTRVPVYDVAASVA
AGHSVERMLEAWPSLDAEKIRLASIYAEANPLRGRRRVFGDLPEGSVIVSDRRVARRRKTG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4EO_RHISN (P55438)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_443845.1
- ProteinModelPortal:   P55438
- SMR:   P55438
- GeneID:   962539
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a03810
- HOGENOM:   HBG548683
- ProtClustDB:   CLSK893852
- InterPro:   IPR007367
- InterPro:   IPR009057
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10

Pfam domain/function: PF04255 DUF433; SSF46689 Homeodomain_like

EC number: NA

Molecular weight: Translated: 24508; Mature: 24508

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAHMPAVAEMLKASEAAVVSRVSLRDVNRVIDEHILPEAFVSLDNGRHVLAGACSLIAF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHH
YFESARRLTSEERLFAIRIAEGRLARARTLPWSALLREDWTVHHEFLTIDLMPFMRGASE
HHHHHHHCCCCCCEEEEEECCCCHHHHHCCCHHHHHHCCCEEEHHEEEEEHHHHHCCHHH
RLDDLAAAREIVTSSPDILGGTPVVRGTRVPVYDVAASVAAGHSVERMLEAWPSLDAEKI
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCHHHH
RLASIYAEANPLRGRRRVFGDLPEGSVIVSDRRVARRRKTG
HHHHHHHCCCCCCCHHHHHCCCCCCCEEECHHHHHHHCCCC
>Mature Secondary Structure
MEAHMPAVAEMLKASEAAVVSRVSLRDVNRVIDEHILPEAFVSLDNGRHVLAGACSLIAF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHH
YFESARRLTSEERLFAIRIAEGRLARARTLPWSALLREDWTVHHEFLTIDLMPFMRGASE
HHHHHHHCCCCCCEEEEEECCCCHHHHHCCCHHHHHHCCCEEEHHEEEEEHHHHHCCHHH
RLDDLAAAREIVTSSPDILGGTPVVRGTRVPVYDVAASVAAGHSVERMLEAWPSLDAEKI
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCHHHH
RLASIYAEANPLRGRRRVFGDLPEGSVIVSDRRVARRRKTG
HHHHHHHCCCCCCCHHHHHCCCCCCCEEECHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424