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The map label for this gene is yebC [C]

Identifier: 163845296

GI number: 163845296

Start: 1165940

End: 1166686

Strand: Reverse

Name: yebC [C]

Synonym: BSUIS_B1192

Alternate gene names: 163845296

Gene position: 1166686-1165940 (Counterclockwise)

Preceding gene: 163845299

Following gene: 163845294

Centisome position: 83.28

GC content: 57.3

Gene sequence:

>747_bases
ATGGCTGGCCATTCACAGTTTAAGAATATCATGCATCGCAAGGGGCGTCAGGACGCCGTGCGGTCGAAAATGTTTTCCAA
GCTCGCGCGCGAAATCACCGTTGCTGCGAAGCAGGGGCTGCCCGACCCGGCGATGAACCCGCGCCTGCGTCTGGCGATCC
AGAATGCCAAGGCGCAGTCCATGCCCAAGGACAATATTGAGCGCGCCATCAAGAAGGCTGCCGGCAATGACGGCGAGAAC
TATGATGAAGTGCGCTATGAGGGCCGTGGCCCCGGCGGCGTATCGGTCATTGTCGAGGCGCTGACGGACAATCGCAATCG
AACGGCATCCAATGTGCGTGCCGCCTTCACCAAGTCGGGCGGTTCGCTCGGCGAAACCGGCTCGGTTTCCTTCATGTTCG
ATCGCGTTGGCGAAATCGTCTACAAGCCTGAAGCTGGCGATGCCGACAAGGTTATGGAAGCGGCTATTGAAGCTGGCGCC
GAAGACGTGCAGTCGGGCGAAGACGGCCATGTTATCCTCTGCGCTTTCGAGGATATCGGCGAGGTGTCCAAGGCGCTCGA
AGCTGCCCTCGGTGAAGCCGAATCGATCAAGACAATCTGGAAGCCGCAGACCAACACCGAACTGGATGAAGAAAAGGCGC
GTTCGGTTCTCAAGCTTCTCAGCGTGCTTGAAGACGATGATGACGTGCAGAATGTCTATACCAATTTTGAAGTCAGCGAC
GAAGTGATGGAAAAGCTGAGCGCTTGA

Upstream 100 bases:

>100_bases
TTCTGCACGGAAAGCGCAGCGGCCGAAGAATGCCGGCCTGTTTCCATTCATGCGTGACGCTTCTTCCGTGCGTTTCTATT
TGAACGAGAACAGGGGTCCC

Downstream 100 bases:

>100_bases
TCTGGTATCTTTAGCCAAACTTAGAGCGCCGATCTGATTGAATCAGATCGGCGCTCTAATCTTTTGTTTTGACGCGCATC
TTTTCCGAAAACCGTTTCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MAGHSQFKNIMHRKGRQDAVRSKMFSKLAREITVAAKQGLPDPAMNPRLRLAIQNAKAQSMPKDNIERAIKKAAGNDGEN
YDEVRYEGRGPGGVSVIVEALTDNRNRTASNVRAAFTKSGGSLGETGSVSFMFDRVGEIVYKPEAGDADKVMEAAIEAGA
EDVQSGEDGHVILCAFEDIGEVSKALEAALGEAESIKTIWKPQTNTELDEEKARSVLKLLSVLEDDDDVQNVYTNFEVSD
EVMEKLSA

Sequences:

>Translated_248_residues
MAGHSQFKNIMHRKGRQDAVRSKMFSKLAREITVAAKQGLPDPAMNPRLRLAIQNAKAQSMPKDNIERAIKKAAGNDGEN
YDEVRYEGRGPGGVSVIVEALTDNRNRTASNVRAAFTKSGGSLGETGSVSFMFDRVGEIVYKPEAGDADKVMEAAIEAGA
EDVQSGEDGHVILCAFEDIGEVSKALEAALGEAESIKTIWKPQTNTELDEEKARSVLKLLSVLEDDDDVQNVYTNFEVSD
EVMEKLSA
>Mature_247_residues
AGHSQFKNIMHRKGRQDAVRSKMFSKLAREITVAAKQGLPDPAMNPRLRLAIQNAKAQSMPKDNIERAIKKAAGNDGENY
DEVRYEGRGPGGVSVIVEALTDNRNRTASNVRAAFTKSGGSLGETGSVSFMFDRVGEIVYKPEAGDADKVMEAAIEAGAE
DVQSGEDGHVILCAFEDIGEVSKALEAALGEAESIKTIWKPQTNTELDEEKARSVLKLLSVLEDDDDVQNVYTNFEVSDE
VMEKLSA

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family [H]

Homologues:

Organism=Homo sapiens, GI27545315, Length=246, Percent_Identity=33.3333333333333, Blast_Score=127, Evalue=1e-29,
Organism=Escherichia coli, GI1788171, Length=248, Percent_Identity=47.9838709677419, Blast_Score=229, Evalue=1e-61,
Organism=Escherichia coli, GI1788294, Length=233, Percent_Identity=41.6309012875536, Blast_Score=160, Evalue=7e-41,
Organism=Caenorhabditis elegans, GI17556100, Length=244, Percent_Identity=27.4590163934426, Blast_Score=69, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6321458, Length=264, Percent_Identity=33.7121212121212, Blast_Score=124, Evalue=2e-29,
Organism=Drosophila melanogaster, GI24583305, Length=248, Percent_Identity=28.6290322580645, Blast_Score=91, Evalue=6e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002876
- InterPro:   IPR017856 [H]

Pfam domain/function: PF01709 DUF28 [H]

EC number: NA

Molecular weight: Translated: 26949; Mature: 26818

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGHSQFKNIMHRKGRQDAVRSKMFSKLAREITVAAKQGLPDPAMNPRLRLAIQNAKAQS
CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHC
MPKDNIERAIKKAAGNDGENYDEVRYEGRGPGGVSVIVEALTDNRNRTASNVRAAFTKSG
CCHHHHHHHHHHHCCCCCCCHHHHEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCC
GSLGETGSVSFMFDRVGEIVYKPEAGDADKVMEAAIEAGAEDVQSGEDGHVILCAFEDIG
CCCCCCCCHHHHHHHHHHEEECCCCCCHHHHHHHHHHHCHHHHHCCCCCCEEEEEHHHHH
EVSKALEAALGEAESIKTIWKPQTNTELDEEKARSVLKLLSVLEDDDDVQNVYTNFEVSD
HHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCH
EVMEKLSA
HHHHHHCC
>Mature Secondary Structure 
AGHSQFKNIMHRKGRQDAVRSKMFSKLAREITVAAKQGLPDPAMNPRLRLAIQNAKAQS
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHC
MPKDNIERAIKKAAGNDGENYDEVRYEGRGPGGVSVIVEALTDNRNRTASNVRAAFTKSG
CCHHHHHHHHHHHCCCCCCCHHHHEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCC
GSLGETGSVSFMFDRVGEIVYKPEAGDADKVMEAAIEAGAEDVQSGEDGHVILCAFEDIG
CCCCCCCCHHHHHHHHHHEEECCCCCCHHHHHHHHHHHCHHHHHCCCCCCEEEEEHHHHH
EVSKALEAALGEAESIKTIWKPQTNTELDEEKARSVLKLLSVLEDDDDVQNVYTNFEVSD
HHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCH
EVMEKLSA
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA