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The map label for this gene is pal

Identifier: 163845274

GI number: 163845274

Start: 1147426

End: 1147932

Strand: Reverse

Name: pal

Synonym: BSUIS_B1170

Alternate gene names: 163845274

Gene position: 1147932-1147426 (Counterclockwise)

Preceding gene: 163845275

Following gene: 163845273

Centisome position: 81.95

GC content: 62.52

Gene sequence:

>507_bases
ATGCGCCGTATCCAGTCGATTGCACGTAGCCCGATCGCTATTGCCCTTTTCATGTCGCTCGCCGTTGCCGGCTGTGCGTC
AAAGAAGAACCTTCCGAATAATGCCGGTGATCTGGGTCTCGGTGCAGGCGCTGCAACGCCGGGCTCCTCGCAGGACTTCA
CCGTTAATGTCGGCGACCGCATCTTCTTCGATCTCGATTCGTCGCTGATCCGCGCCGATGCGCAGCAGACGCTTTCCAAG
CAGGCCCAGTGGTTGCAGCGTTATCCGCAGTATTCGATCACGATCGAAGGCCATGCCGACGAGCGCGGCACGCGTGAGTA
CAACCTCGCCCTTGGCCAGCGCCGTGCTGCGGCCACCCGCGACTTCCTCGCTTCGCGCGGTGTGCCGACCAACCGCATGC
GCACCATTTCCTACGGTAATGAGCGCCCGGTTGCCGTCTGCGATGCCGACACATGCTGGTCGCAGAACCGTCGCGCCGTC
ACCGTTCTCAACGGGGCCGGACGGTAA

Upstream 100 bases:

>100_bases
TCGCAAGAAAACGTTAACTATAATTTTTGAGCCTGTTTTAACCTCAATATGATTATTGGATGGTTACGCAGGAACATCAA
ATCTTAAGGAGCTCCGGCCC

Downstream 100 bases:

>100_bases
AACCGGCAACGTCCCGAGGGTCGGTCGGCTATCGGGTAAACCGGCGATAACACAACAGTGTTACGGAAAAAGCGGCCTTC
AGGCCGCTTTTTTCGTCATT

Product: peptidoglycan-associated lipoprotein

Products: NA

Alternate protein names: 16.5 kDa minor OMP; 16 kDa OMP; Minor outer membrane protein omp16

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MRRIQSIARSPIAIALFMSLAVAGCASKKNLPNNAGDLGLGAGAATPGSSQDFTVNVGDRIFFDLDSSLIRADAQQTLSK
QAQWLQRYPQYSITIEGHADERGTREYNLALGQRRAAATRDFLASRGVPTNRMRTISYGNERPVAVCDADTCWSQNRRAV
TVLNGAGR

Sequences:

>Translated_168_residues
MRRIQSIARSPIAIALFMSLAVAGCASKKNLPNNAGDLGLGAGAATPGSSQDFTVNVGDRIFFDLDSSLIRADAQQTLSK
QAQWLQRYPQYSITIEGHADERGTREYNLALGQRRAAATRDFLASRGVPTNRMRTISYGNERPVAVCDADTCWSQNRRAV
TVLNGAGR
>Mature_168_residues
MRRIQSIARSPIAIALFMSLAVAGCASKKNLPNNAGDLGLGAGAATPGSSQDFTVNVGDRIFFDLDSSLIRADAQQTLSK
QAQWLQRYPQYSITIEGHADERGTREYNLALGQRRAAATRDFLASRGVPTNRMRTISYGNERPVAVCDADTCWSQNRRAV
TVLNGAGR

Specific function: Thought To Play A Role In Bacterial Envelope Integrity. Very Strongly Associated With The Peptidoglycan. [C]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain

Homologues:

Organism=Escherichia coli, GI1786962, Length=156, Percent_Identity=38.4615384615385, Blast_Score=119, Evalue=1e-28,
Organism=Escherichia coli, GI48994946, Length=124, Percent_Identity=28.2258064516129, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): OMP16_BRUAB (P0A3S9)

Other databases:

- EMBL:   L27996
- EMBL:   AE017223
- PIR:   I40346
- RefSeq:   YP_222360.1
- ProteinModelPortal:   P0A3S9
- SMR:   P0A3S9
- GeneID:   3339640
- GenomeReviews:   AE017223_GR
- KEGG:   bmb:BruAb1_1680
- HOGENOM:   HBG751251
- OMA:   ELERQAC
- PhylomeDB:   P0A3S9
- ProtClustDB:   CLSK863900
- BioCyc:   BABO262698:BRUAB1_1680-MONOMER
- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665
- InterPro:   IPR014169
- Gene3D:   G3DSA:3.30.1330.60
- PRINTS:   PR01021
- TIGRFAMs:   TIGR02802

Pfam domain/function: PF00691 OmpA; SSF103088 OmpA/MotB_C

EC number: NA

Molecular weight: Translated: 18233; Mature: 18233

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: PS01068 OMPA_1; PS51123 OMPA_2; PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRIQSIARSPIAIALFMSLAVAGCASKKNLPNNAGDLGLGAGAATPGSSQDFTVNVGDR
CCHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCE
IFFDLDSSLIRADAQQTLSKQAQWLQRYPQYSITIEGHADERGTREYNLALGQRRAAATR
EEEECCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEHHHHHHHHHHHHH
DFLASRGVPTNRMRTISYGNERPVAVCDADTCWSQNRRAVTVLNGAGR
HHHHHCCCCCCCEEEEECCCCCCEEEECCHHHHCCCCCEEEEECCCCC
>Mature Secondary Structure
MRRIQSIARSPIAIALFMSLAVAGCASKKNLPNNAGDLGLGAGAATPGSSQDFTVNVGDR
CCHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCE
IFFDLDSSLIRADAQQTLSKQAQWLQRYPQYSITIEGHADERGTREYNLALGQRRAAATR
EEEECCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEHHHHHHHHHHHHH
DFLASRGVPTNRMRTISYGNERPVAVCDADTCWSQNRRAVTVLNGAGR
HHHHHCCCCCCCEEEEECCCCCCEEEECCHHHHCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8063379; 10456959