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The map label for this gene is yfjP [H]

Identifier: 163845230

GI number: 163845230

Start: 1103411

End: 1104109

Strand: Reverse

Name: yfjP [H]

Synonym: BSUIS_B1124

Alternate gene names: 163845230

Gene position: 1104109-1103411 (Counterclockwise)

Preceding gene: 163845234

Following gene: 163845229

Centisome position: 78.82

GC content: 63.52

Gene sequence:

>699_bases
ATGTCATTTGATTCCATTGGTACGTTGTGTGCCGGGAGAATGAAAGGCCAGGCGATGCGGCGGATCGATACATTGAGCGA
TATTGAAGCAGGGCTGGAGGCGCTGGTTCTTGCCGACAGGCGGCTCGCCGATATCCGCAACCGTTCGCATGCAGTGCCTC
TGCGCCGGTCCGAACCCGGATTTGAAAGTCTGGCTTCCATCGTCGTCGCGCAGCAGGTTTCGACCGCCAGCGCCGCCGCC
ATCTGGGCGCGGTTGAAACAGGTGATCAATCCGCTGACGCCGGAAGCCTATATCGCGGGCGGGGAGGAGGCGTGGCGTTT
GGCCGGGCTTTCGCGGCCCAAGCAGAGAACGCTTCTGGCGTTAAGCGAGGCACTGGCAGGCGGTGCGCTCGATCTTCACG
GCCTGTGCGACCTGCCTGCCGGGGAAGCCATTGCCACACTGACTGCGATCAAGGGTATCGGCCCCTGGACGGCGGAGGTT
TATCTGCTCTTTGCGGCCGGCCATCCGGATGTGTTTCCGGCGGGCGATGTCGCGCTGCAAACGGCGGTCGGCCATGCCTT
TGCTCACGAGACCAGACCCGATGCGGCAGCTCTTCGCCAATTGGCGGAAAACTGGGCGCCATGGCGCGGCGTGGCGGCGC
GTTTGTTCTGGGCCTATTATGCCGCCATCAAAGGCCGCGAGGCCGCCCCGCTTCTGTAG

Upstream 100 bases:

>100_bases
TCAAAAGCGCGGAATAGGCATGGCCCAGATGGAGCTGGCCATTGGGACTTGGAGCAAAGCGGAAAACAGGTACGGTCATT
GCGGGTTCAATGTCAGTTGA

Downstream 100 bases:

>100_bases
ATCCCGTTGTAAAACTTGCGTGTTTTCGGAGGCATAAATCCGTTTCCGCTTCACAATCCTGTCACGTCGGGCTTACATTA
TCCGCATCGGCTGATGATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 231

Protein sequence:

>232_residues
MSFDSIGTLCAGRMKGQAMRRIDTLSDIEAGLEALVLADRRLADIRNRSHAVPLRRSEPGFESLASIVVAQQVSTASAAA
IWARLKQVINPLTPEAYIAGGEEAWRLAGLSRPKQRTLLALSEALAGGALDLHGLCDLPAGEAIATLTAIKGIGPWTAEV
YLLFAAGHPDVFPAGDVALQTAVGHAFAHETRPDAAALRQLAENWAPWRGVAARLFWAYYAAIKGREAAPLL

Sequences:

>Translated_232_residues
MSFDSIGTLCAGRMKGQAMRRIDTLSDIEAGLEALVLADRRLADIRNRSHAVPLRRSEPGFESLASIVVAQQVSTASAAA
IWARLKQVINPLTPEAYIAGGEEAWRLAGLSRPKQRTLLALSEALAGGALDLHGLCDLPAGEAIATLTAIKGIGPWTAEV
YLLFAAGHPDVFPAGDVALQTAVGHAFAHETRPDAAALRQLAENWAPWRGVAARLFWAYYAAIKGREAAPLL
>Mature_231_residues
SFDSIGTLCAGRMKGQAMRRIDTLSDIEAGLEALVLADRRLADIRNRSHAVPLRRSEPGFESLASIVVAQQVSTASAAAI
WARLKQVINPLTPEAYIAGGEEAWRLAGLSRPKQRTLLALSEALAGGALDLHGLCDLPAGEAIATLTAIKGIGPWTAEVY
LLFAAGHPDVFPAGDVALQTAVGHAFAHETRPDAAALRQLAENWAPWRGVAARLFWAYYAAIKGREAAPLL

Specific function: Hydrolysis of the deoxyribose N-glycosidic bond to excise 3-methyladenine, 3-methylguanine, 7-methylguanine, O2- methylthymine, and O2-methylcytosine from the damaged DNA polymer formed by alkylation lesions [H]

COG id: COG0122

COG function: function code L; 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the alkylbase DNA glycosidase alkA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011257
- InterPro:   IPR003265
- InterPro:   IPR003583
- InterPro:   IPR023170 [H]

Pfam domain/function: PF00730 HhH-GPD [H]

EC number: =3.2.2.21 [H]

Molecular weight: Translated: 24696; Mature: 24564

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFDSIGTLCAGRMKGQAMRRIDTLSDIEAGLEALVLADRRLADIRNRSHAVPLRRSEPG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
FESLASIVVAQQVSTASAAAIWARLKQVINPLTPEAYIAGGEEAWRLAGLSRPKQRTLLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHCCCCCHHHHHHH
LSEALAGGALDLHGLCDLPAGEAIATLTAIKGIGPWTAEVYLLFAAGHPDVFPAGDVALQ
HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCHHHHH
TAVGHAFAHETRPDAAALRQLAENWAPWRGVAARLFWAYYAAIKGREAAPLL
HHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SFDSIGTLCAGRMKGQAMRRIDTLSDIEAGLEALVLADRRLADIRNRSHAVPLRRSEPG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
FESLASIVVAQQVSTASAAAIWARLKQVINPLTPEAYIAGGEEAWRLAGLSRPKQRTLLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHCCCCCHHHHHHH
LSEALAGGALDLHGLCDLPAGEAIATLTAIKGIGPWTAEVYLLFAAGHPDVFPAGDVALQ
HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCHHHHH
TAVGHAFAHETRPDAAALRQLAENWAPWRGVAARLFWAYYAAIKGREAAPLL
HHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969503; 9384377 [H]