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The map label for this gene is aapJ [H]

Identifier: 163845062

GI number: 163845062

Start: 924339

End: 925358

Strand: Reverse

Name: aapJ [H]

Synonym: BSUIS_B0940

Alternate gene names: 163845062

Gene position: 925358-924339 (Counterclockwise)

Preceding gene: 163845063

Following gene: 163845058

Centisome position: 66.06

GC content: 58.63

Gene sequence:

>1020_bases
ATGAAAAAGGCAGTTTGGGGTGCGTTGCTGGCGGCGGGCTTTGCCCTGTCGGCACAAGGCGGGGCTGCGGCGGACACGCT
TTCGACGGTCAAGGAACGCGGCAAGGTCAACTGCGGCGTCAGCCAGGGCGTTGCGGGCTTTTCGTCGCCGGACGATCAGG
GCAAATGGACCGGCTTCGACATTGATTTCTGCCGTGCGGTTTCGGCTGCGGTCTTTGGCGATCCCGACAAGGTGAGCTTC
ATTCCGCTTTCGACCAAGGAACGTTTTACCGCATTGCAATCGGGGACGGTCGATCTGCTTTCGCGCCAGACCACCTGGAC
GCTTTCGCGCGATGCAGGCATGGGCATCCATTTTGTCGGCACCGCCTATTATGACGGACAGGGCTTCATGATCCGCAAGG
ATCTGGGTGTGGACAGCGCCCTGAAGCTTGACGGTGCTTCCATCTGCACCGAACAGGGCACGACGACCGAACAGAACGTG
GCCGATTATTTCGGCGCCCATAATATCAAATATGAGCCGGTGGTGATCGATTCCGCTGACGGTATTCTGAAAGCATTCGA
GACGGGGCGTTGCGACGTCTATACGACCGACGCTTCGGCGCTTTATGCGCAGCGCCTCAAGCTTGCCGAGCCGGACGCCT
ATATGGTGTTGCCGGAGGTTATTTCAAAAGAGCCGCTTGGCCCCGCTGTTCGCCAGGGGGACGATAAATGGTTCAATATT
GTGCGCTGGACGCTGTTTGCCTTGCTGGAAGCGGAAGAGCTCGGCATCACACAGAAGACGGTGGCAGCGGACCTGGATTC
CCGGAAGCCGGATATACGCCGCTTCCTCGGCTCGGAAGGCGATAATGGCCAGCAACTGGGCCTCGAACCGAAATGGGCTT
ATAATATCGTGGCGTCGGTCGGCAATTATGGCGAGATGTTCGAGCGCACCATCGGTGAGGGCAGCCTGCTCAAGATCAAC
CGGGGTATCAATGCGCTCTGGAACAAGGGTGGGCTGATGTACGCCCCGCCGGTCAAATAA

Upstream 100 bases:

>100_bases
GTCGTCGGATAATGGAACAAACAACAAGCCCGGCGGCATGTCGCCGGGCAATGGATCGGCTTTGTCTAAATTATGAGCCG
AAACTCTGGGAGGAGGAACA

Downstream 100 bases:

>100_bases
TCGGCGGGATGCGCCCTCGCTTTAAACATATCACAGGCGTTTGTATTCAACACCGCGTGCTAGCCAGCAGCCGACCGTGA
CGCCGGTTATCCTGCCTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MKKAVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDQGKWTGFDIDFCRAVSAAVFGDPDKVSF
IPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVGTAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNV
ADYFGAHNIKYEPVVIDSADGILKAFETGRCDVYTTDASALYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI
VRWTLFALLEAEELGITQKTVAADLDSRKPDIRRFLGSEGDNGQQLGLEPKWAYNIVASVGNYGEMFERTIGEGSLLKIN
RGINALWNKGGLMYAPPVK

Sequences:

>Translated_339_residues
MKKAVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDQGKWTGFDIDFCRAVSAAVFGDPDKVSF
IPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVGTAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNV
ADYFGAHNIKYEPVVIDSADGILKAFETGRCDVYTTDASALYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI
VRWTLFALLEAEELGITQKTVAADLDSRKPDIRRFLGSEGDNGQQLGLEPKWAYNIVASVGNYGEMFERTIGEGSLLKIN
RGINALWNKGGLMYAPPVK
>Mature_339_residues
MKKAVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDQGKWTGFDIDFCRAVSAAVFGDPDKVSF
IPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVGTAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNV
ADYFGAHNIKYEPVVIDSADGILKAFETGRCDVYTTDASALYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI
VRWTLFALLEAEELGITQKTVAADLDSRKPDIRRFLGSEGDNGQQLGLEPKWAYNIVASVGNYGEMFERTIGEGSLLKIN
RGINALWNKGGLMYAPPVK

Specific function: Part of a binding-protein-dependent transport system for L-amino acids, affects the uptake as well as efflux of these amino acids [H]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1786876, Length=224, Percent_Identity=23.2142857142857, Blast_Score=68, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005768
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 36606; Mature: 36606

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKAVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDQGKWTGFD
CCHHHHHHHHHHCCEEECCCCCHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCEECCC
IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVG
HHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHCCCHHHHCCCCEEEEECCCCCCEEEEE
TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSAD
EEEECCCCEEEEECCCCCCEEEECCCHHCCCCCCCCHHHHHHHHCCCCCEECEEEEECCC
GILKAFETGRCDVYTTDASALYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI
HHHHHHHCCCCEEEECCHHHHHHHHHHCCCCCCEEEEHHHHCCCCCCHHHHCCCHHHHHH
VRWTLFALLEAEELGITQKTVAADLDSRKPDIRRFLGSEGDNGQQLGLEPKWAYNIVASV
HHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH
GNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK
CCHHHHHHHHCCCCCEEEEECCCHHHHCCCCEEECCCCC
>Mature Secondary Structure
MKKAVWGALLAAGFALSAQGGAAADTLSTVKERGKVNCGVSQGVAGFSSPDDQGKWTGFD
CCHHHHHHHHHHCCEEECCCCCHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCEECCC
IDFCRAVSAAVFGDPDKVSFIPLSTKERFTALQSGTVDLLSRQTTWTLSRDAGMGIHFVG
HHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHCCCHHHHCCCCEEEEECCCCCCEEEEE
TAYYDGQGFMIRKDLGVDSALKLDGASICTEQGTTTEQNVADYFGAHNIKYEPVVIDSAD
EEEECCCCEEEEECCCCCCEEEECCCHHCCCCCCCCHHHHHHHHCCCCCEECEEEEECCC
GILKAFETGRCDVYTTDASALYAQRLKLAEPDAYMVLPEVISKEPLGPAVRQGDDKWFNI
HHHHHHHCCCCEEEECCHHHHHHHHHHCCCCCCEEEEHHHHCCCCCCHHHHCCCHHHHHH
VRWTLFALLEAEELGITQKTVAADLDSRKPDIRRFLGSEGDNGQQLGLEPKWAYNIVASV
HHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH
GNYGEMFERTIGEGSLLKINRGINALWNKGGLMYAPPVK
CCHHHHHHHHCCCCCEEEEECCCHHHHCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8898392 [H]