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The map label for this gene is trx [H]

Identifier: 163845011

GI number: 163845011

Start: 864056

End: 865030

Strand: Reverse

Name: trx [H]

Synonym: BSUIS_B0885

Alternate gene names: 163845011

Gene position: 865030-864056 (Counterclockwise)

Preceding gene: 163845012

Following gene: 163845010

Centisome position: 61.75

GC content: 60.31

Gene sequence:

>975_bases
ATGACAAGCCAAGACAATCCTTATGGTGGCGCCTATGGCGGCCCGGCCAGCCAGATGACGGCCAATGTTTCTTTTGGCCA
GCCTTCCGCGCCTGCAAATGGCGGTGATCTTATCAAGGACACAACAACGGCGGGTTTTCAGGCGGATGTAATTACAGAAT
CGCGCAAACAACCGGTACTCGTGGACTTTTGGGCCCCCTGGTGTGGTCCCTGCAAGCAATTGACGCCGATCATTGAAAAG
GCAGTGCGGGAAGCCCGCGGTGCCGTCAAGCTTGTAAAGATGAATATCGATGAGCACCCGGCGATCGCTGGCCAGCTTGG
CATCCAGTCGATTCCGGCGGTTATCGCCTTTGTCAACGGCCAGCCGGTCGATGGTTTCATGGGCGCGCAGCCCGAAACCA
AGGTGAAGGAATTCATCGCCAAGGTTGGCGGTCCGAGCGATCAGGAAGCCGCCCTTGCGGAAGCCATCGCGACGGCGAAG
GAATTGGCGCAAGCGGGTGATTTCGTGCAGGCGGCCGAGATATTTTCGTCGATCCTGCAAGTTGCGCCGGATAATGTGGA
TGCGGTCGTGGGGCTTGCCACCTGCATGCTGGAATCGGGCGATGCGGAGCAGGCGCGCTCATTGCTTGGGACGCTGGCTG
CCGAGAAGCAGAATGAGGCCCCCGTCCGTGCGCTCGAAGCGCGCCTGGCGCTTGCCGATCAGGTGAAACTCATCGGCGAT
CCGGTGGAGCTTGAGCGCCGTCTTGCGGCTGATCCGGGCGATTATCAGGCGCGGTTCGACCTTGCACAGGTGCGCAATGC
GCAAGGTCGCCGGGACGATGCGGCAAACGAGCTTTTGGCGATCATGCGGGCGGATCGTGCATGGAACGACGATGGTGCAC
GCAAGCAGTTGCTCCAGTTCTTCGAGGCCTGGGGCCATATGGACCCGGCCACGCTGACTGCACGCCGCAAATTGTCGTCG
CTCCTGTTTTCGTGA

Upstream 100 bases:

>100_bases
ATATTTGTCTTGAAATCGGCCGCCCGAGACACAAACTGAATGATGGGAACCGGCTTCCGCTTGAAACAGGCAGGAGAGCC
GGAAAATGCGAGGAATTCCT

Downstream 100 bases:

>100_bases
TTTCCGAAAGAGGCCGACTGTCGTTGGGGATGGGTCTCGAACGGTGATGCTGAGGAGGTTATGATGCAAGTGGGCAATGC
CCGGTATAGAACGGCTGCCG

Product: thioredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 323

Protein sequence:

>324_residues
MTSQDNPYGGAYGGPASQMTANVSFGQPSAPANGGDLIKDTTTAGFQADVITESRKQPVLVDFWAPWCGPCKQLTPIIEK
AVREARGAVKLVKMNIDEHPAIAGQLGIQSIPAVIAFVNGQPVDGFMGAQPETKVKEFIAKVGGPSDQEAALAEAIATAK
ELAQAGDFVQAAEIFSSILQVAPDNVDAVVGLATCMLESGDAEQARSLLGTLAAEKQNEAPVRALEARLALADQVKLIGD
PVELERRLAADPGDYQARFDLAQVRNAQGRRDDAANELLAIMRADRAWNDDGARKQLLQFFEAWGHMDPATLTARRKLSS
LLFS

Sequences:

>Translated_324_residues
MTSQDNPYGGAYGGPASQMTANVSFGQPSAPANGGDLIKDTTTAGFQADVITESRKQPVLVDFWAPWCGPCKQLTPIIEK
AVREARGAVKLVKMNIDEHPAIAGQLGIQSIPAVIAFVNGQPVDGFMGAQPETKVKEFIAKVGGPSDQEAALAEAIATAK
ELAQAGDFVQAAEIFSSILQVAPDNVDAVVGLATCMLESGDAEQARSLLGTLAAEKQNEAPVRALEARLALADQVKLIGD
PVELERRLAADPGDYQARFDLAQVRNAQGRRDDAANELLAIMRADRAWNDDGARKQLLQFFEAWGHMDPATLTARRKLSS
LLFS
>Mature_323_residues
TSQDNPYGGAYGGPASQMTANVSFGQPSAPANGGDLIKDTTTAGFQADVITESRKQPVLVDFWAPWCGPCKQLTPIIEKA
VREARGAVKLVKMNIDEHPAIAGQLGIQSIPAVIAFVNGQPVDGFMGAQPETKVKEFIAKVGGPSDQEAALAEAIATAKE
LAQAGDFVQAAEIFSSILQVAPDNVDAVVGLATCMLESGDAEQARSLLGTLAAEKQNEAPVRALEARLALADQVKLIGDP
VELERRLAADPGDYQARFDLAQVRNAQGRRDDAANELLAIMRADRAWNDDGARKQLLQFFEAWGHMDPATLTARRKLSSL
LFS

Specific function: Unknown

COG id: COG3118

COG function: function code O; Thioredoxin domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI21361403, Length=99, Percent_Identity=40.4040404040404, Blast_Score=82, Evalue=8e-16,
Organism=Escherichia coli, GI87081747, Length=274, Percent_Identity=29.9270072992701, Blast_Score=117, Evalue=8e-28,
Organism=Escherichia coli, GI1788936, Length=75, Percent_Identity=46.6666666666667, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI87082331, Length=104, Percent_Identity=38.4615384615385, Blast_Score=85, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI212646193, Length=111, Percent_Identity=36.9369369369369, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI71998175, Length=83, Percent_Identity=38.5542168674699, Blast_Score=66, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17509965, Length=90, Percent_Identity=32.2222222222222, Blast_Score=64, Evalue=1e-10,
Organism=Drosophila melanogaster, GI28573567, Length=100, Percent_Identity=37, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI21358065, Length=127, Percent_Identity=36.2204724409449, Blast_Score=77, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005746
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR013766
- InterPro:   IPR012335
- InterPro:   IPR011990 [H]

Pfam domain/function: PF00085 Thioredoxin [H]

EC number: NA

Molecular weight: Translated: 34510; Mature: 34379

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: PS50293 TPR_REGION ; PS00194 THIOREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSQDNPYGGAYGGPASQMTANVSFGQPSAPANGGDLIKDTTTAGFQADVITESRKQPVL
CCCCCCCCCCCCCCCHHHEEEECCCCCCCCCCCCCCCHHCCCCCCCEEHHHHHCCCCCEE
VDFWAPWCGPCKQLTPIIEKAVREARGAVKLVKMNIDEHPAIAGQLGIQSIPAVIAFVNG
EEECCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHEEECC
QPVDGFMGAQPETKVKEFIAKVGGPSDQEAALAEAIATAKELAQAGDFVQAAEIFSSILQ
CCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
VAPDNVDAVVGLATCMLESGDAEQARSLLGTLAAEKQNEAPVRALEARLALADQVKLIGD
HCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
PVELERRLAADPGDYQARFDLAQVRNAQGRRDDAANELLAIMRADRAWNDDGARKQLLQF
HHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
FEAWGHMDPATLTARRKLSSLLFS
HHHHCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TSQDNPYGGAYGGPASQMTANVSFGQPSAPANGGDLIKDTTTAGFQADVITESRKQPVL
CCCCCCCCCCCCCCHHHEEEECCCCCCCCCCCCCCCHHCCCCCCCEEHHHHHCCCCCEE
VDFWAPWCGPCKQLTPIIEKAVREARGAVKLVKMNIDEHPAIAGQLGIQSIPAVIAFVNG
EEECCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHEEECC
QPVDGFMGAQPETKVKEFIAKVGGPSDQEAALAEAIATAKELAQAGDFVQAAEIFSSILQ
CCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
VAPDNVDAVVGLATCMLESGDAEQARSLLGTLAAEKQNEAPVRALEARLALADQVKLIGD
HCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
PVELERRLAADPGDYQARFDLAQVRNAQGRRDDAANELLAIMRADRAWNDDGARKQLLQF
HHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
FEAWGHMDPATLTARRKLSSLLFS
HHHHCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]