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The map label for this gene is ycaR [C]

Identifier: 163845009

GI number: 163845009

Start: 862917

End: 863111

Strand: Reverse

Name: ycaR [C]

Synonym: BSUIS_B0883

Alternate gene names: 163845009

Gene position: 863111-862917 (Counterclockwise)

Preceding gene: 163845010

Following gene: 163845008

Centisome position: 61.61

GC content: 61.54

Gene sequence:

>195_bases
ATGGATGACAAGGTGGAAACCGGCAATATCGATGTGCGGCTGCTGGAACTTCTCGTCTGCCCGCTGACCAAGGGGCCGCT
GGAATATGATGCAGAGCGCAGCGAACTGGTCTCGCGCAAGGCACGGCTCGCCTATCCGGTGCGTGGCGGCATTCCCATTA
TGCTGCCTTCCGAGGCGCGCAGCCTGACCGAGTGA

Upstream 100 bases:

>100_bases
ATGCATCGGATAATGCGTAAAGACAAAGAGATAGAGCGGTACCAACGGTTCCGTTTTAACTACAGCTTAAAGCAAGATCG
AATCGGAGTGGAACAACGAC

Downstream 100 bases:

>100_bases
GTTTCGCTCGCGGTGAGTGGCGAAAATGGCCTGGAAATGGCGCGGAAATGGCCAAGCTGCCGGGCGGTTTTCACGGTTAT
ATAATTTCTGCGCAGGCCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 64; Mature: 64

Protein sequence:

>64_residues
MDDKVETGNIDVRLLELLVCPLTKGPLEYDAERSELVSRKARLAYPVRGGIPIMLPSEARSLTE

Sequences:

>Translated_64_residues
MDDKVETGNIDVRLLELLVCPLTKGPLEYDAERSELVSRKARLAYPVRGGIPIMLPSEARSLTE
>Mature_64_residues
MDDKVETGNIDVRLLELLVCPLTKGPLEYDAERSELVSRKARLAYPVRGGIPIMLPSEARSLTE

Specific function: Unknown

COG id: COG2835

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0434 family

Homologues:

Organism=Escherichia coli, GI1787146, Length=54, Percent_Identity=48.1481481481481, Blast_Score=62, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2641_BRUAB (Q579B2)

Other databases:

- EMBL:   AE017224
- RefSeq:   YP_223133.1
- ProteinModelPortal:   Q579B2
- SMR:   Q579B2
- GeneID:   3341530
- GenomeReviews:   AE017224_GR
- KEGG:   bmb:BruAb2_0341
- HOGENOM:   HBG713593
- OMA:   NELVSEK
- PhylomeDB:   Q579B2
- ProtClustDB:   CLSK898820
- BioCyc:   BABO262698:BRUAB2_0341-MONOMER
- HAMAP:   MF_01187
- InterPro:   IPR005651

Pfam domain/function: PF03966 Trm112p

EC number: NA

Molecular weight: Translated: 7126; Mature: 7126

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDKVETGNIDVRLLELLVCPLTKGPLEYDAERSELVSRKARLAYPVRGGIPIMLPSEAR
CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCC
SLTE
CCCC
>Mature Secondary Structure
MDDKVETGNIDVRLLELLVCPLTKGPLEYDAERSELVSRKARLAYPVRGGIPIMLPSEAR
CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCC
SLTE
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA