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The map label for this gene is rbsB [H]

Identifier: 163844976

GI number: 163844976

Start: 831167

End: 832114

Strand: Reverse

Name: rbsB [H]

Synonym: BSUIS_B0850

Alternate gene names: 163844976

Gene position: 832114-831167 (Counterclockwise)

Preceding gene: 163844977

Following gene: 163844975

Centisome position: 59.4

GC content: 57.38

Gene sequence:

>948_bases
ATGTTCAAGAAGGGTATGCGCGTTCTGTTCGCCGCTGCGGCAGCGTTGCCTCTTATCGCCAGCACGGCCTGGGCCGAAGG
ACTGATGACGATCATCGTCAACGATCCGTCCAACCCGTATTGGTTCACCGAAGGCGAAGTCGCCAAGAAGACCGCCGAGG
GTCTGGGTTATAAGGCTGTTGTCGGGGGCCACAAGGGCGACACCAATACCGAAAGCAACCTGATCGACACGGCGATCACC
AACAAGTCGGTTGCCATTATTCTCGATCCGGCCAATGCCGACGGTTCGGTCGGCGCGGTCAAGCGCGCGATTGCCGCCAA
TATTCCGGTTTTCCTCATCAATGCTGAAATCAATCAGGAAGGGCTTGCCGAGGCGCAGCTCGTTTCCAACAATGCGCAGG
GTGCGGCTCTCGGCGCGACCCAGTGGGTTGAAAGCGTTGGCGACAAGGGCAAATATGTCGAACTTTTCGGTGCGCCTTCC
GACAATAATGCCGCCACGCGCTCCAACGGTTATGAAACCGTTCTTTCGCAGTATCCCGATCTGGTGAGGGTCGGCAAGGA
CATCGCCAACTGGGACCGCACGCAGGGCCACGACAAGATGCAGGCACTGCTTCAGGCAAATCCGGACATTATCGGCGTCA
TCTCCGGCAATGATGAAATGGCGCTTGGCGCGATTGCTGCCCTGAAGAAGGCCGGCAAGCTCGATCAGGTGAAGGTCGGC
GGTTTTGATGGCTCGCCGGACGCGATTGCGGCCATCAAGGCCGGTGAACTGCAATATACCGTTCTGCAACCGGTTGCCGT
GTTCTCGGAAGCTGCCGTCAAGCAGGCCGACAACTTCATCAAGACCGGCAAGACCGGCGTGGACCATGAAAAGCAGCTTT
TCGACTGCATCCTCATCACCAAGGACAATGTTGACAAGTACACCTCGCCGTTCGTTCTGGAACAGTAA

Upstream 100 bases:

>100_bases
GGTTTCCAGAAGGCCGCATCGTCTTAAAAACGGCCCATGGAAATAAGTACTGCCGGGGAACCGGCACAACGCAAATGAAA
AACATCAAGGGAGTGAGACT

Downstream 100 bases:

>100_bases
GGTTTGAAAAACGCACATCCCGTCAGCAGAAAGCTTTCGGGATGCGCATTCCAGAAGTCCCTCTCCTCTGTTAAATCCCA
CGCAATCACGCGCTGGGTTT

Product: hypothetical protein

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MFKKGMRVLFAAAAALPLIASTAWAEGLMTIIVNDPSNPYWFTEGEVAKKTAEGLGYKAVVGGHKGDTNTESNLIDTAIT
NKSVAIILDPANADGSVGAVKRAIAANIPVFLINAEINQEGLAEAQLVSNNAQGAALGATQWVESVGDKGKYVELFGAPS
DNNAATRSNGYETVLSQYPDLVRVGKDIANWDRTQGHDKMQALLQANPDIIGVISGNDEMALGAIAALKKAGKLDQVKVG
GFDGSPDAIAAIKAGELQYTVLQPVAVFSEAAVKQADNFIKTGKTGVDHEKQLFDCILITKDNVDKYTSPFVLEQ

Sequences:

>Translated_315_residues
MFKKGMRVLFAAAAALPLIASTAWAEGLMTIIVNDPSNPYWFTEGEVAKKTAEGLGYKAVVGGHKGDTNTESNLIDTAIT
NKSVAIILDPANADGSVGAVKRAIAANIPVFLINAEINQEGLAEAQLVSNNAQGAALGATQWVESVGDKGKYVELFGAPS
DNNAATRSNGYETVLSQYPDLVRVGKDIANWDRTQGHDKMQALLQANPDIIGVISGNDEMALGAIAALKKAGKLDQVKVG
GFDGSPDAIAAIKAGELQYTVLQPVAVFSEAAVKQADNFIKTGKTGVDHEKQLFDCILITKDNVDKYTSPFVLEQ
>Mature_315_residues
MFKKGMRVLFAAAAALPLIASTAWAEGLMTIIVNDPSNPYWFTEGEVAKKTAEGLGYKAVVGGHKGDTNTESNLIDTAIT
NKSVAIILDPANADGSVGAVKRAIAANIPVFLINAEINQEGLAEAQLVSNNAQGAALGATQWVESVGDKGKYVELFGAPS
DNNAATRSNGYETVLSQYPDLVRVGKDIANWDRTQGHDKMQALLQANPDIIGVISGNDEMALGAIAALKKAGKLDQVKVG
GFDGSPDAIAAIKAGELQYTVLQPVAVFSEAAVKQADNFIKTGKTGVDHEKQLFDCILITKDNVDKYTSPFVLEQ

Specific function: Involved in the high-affinity D-ribose membrane transport system and also serves as the primary chemoreceptor for chemotaxis [H]

COG id: COG1879

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790192, Length=302, Percent_Identity=30.794701986755, Blast_Score=122, Evalue=3e-29,
Organism=Escherichia coli, GI1790526, Length=296, Percent_Identity=26.3513513513513, Blast_Score=89, Evalue=5e-19,
Organism=Escherichia coli, GI1789990, Length=249, Percent_Identity=28.1124497991968, Blast_Score=65, Evalue=7e-12,
Organism=Escherichia coli, GI1790674, Length=226, Percent_Identity=26.5486725663717, Blast_Score=65, Evalue=7e-12,
Organism=Escherichia coli, GI1788473, Length=222, Percent_Identity=31.981981981982, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: 3940 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 5900 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 1520 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001761 [H]

Pfam domain/function: PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 33250; Mature: 33250

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKKGMRVLFAAAAALPLIASTAWAEGLMTIIVNDPSNPYWFTEGEVAKKTAEGLGYKAV
CCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEECCCHHHHHHHHCCCEEEE
VGGHKGDTNTESNLIDTAITNKSVAIILDPANADGSVGAVKRAIAANIPVFLINAEINQE
ECCCCCCCCCCCHHHHHEECCCEEEEEEECCCCCCCHHHHHHHHHCCCCEEEEEECCCCC
GLAEAQLVSNNAQGAALGATQWVESVGDKGKYVELFGAPSDNNAATRSNGYETVLSQYPD
CCHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHCHH
LVRVGKDIANWDRTQGHDKMQALLQANPDIIGVISGNDEMALGAIAALKKAGKLDQVKVG
HHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEC
GFDGSPDAIAAIKAGELQYTVLQPVAVFSEAAVKQADNFIKTGKTGVDHEKQLFDCILIT
CCCCCCCCEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEEEEEEE
KDNVDKYTSPFVLEQ
CCCCCCCCCCEEECC
>Mature Secondary Structure
MFKKGMRVLFAAAAALPLIASTAWAEGLMTIIVNDPSNPYWFTEGEVAKKTAEGLGYKAV
CCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEECCCHHHHHHHHCCCEEEE
VGGHKGDTNTESNLIDTAITNKSVAIILDPANADGSVGAVKRAIAANIPVFLINAEINQE
ECCCCCCCCCCCHHHHHEECCCEEEEEEECCCCCCCHHHHHHHHHCCCCEEEEEECCCCC
GLAEAQLVSNNAQGAALGATQWVESVGDKGKYVELFGAPSDNNAATRSNGYETVLSQYPD
CCHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHCHH
LVRVGKDIANWDRTQGHDKMQALLQANPDIIGVISGNDEMALGAIAALKKAGKLDQVKVG
HHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEC
GFDGSPDAIAAIKAGELQYTVLQPVAVFSEAAVKQADNFIKTGKTGVDHEKQLFDCILIT
CCCCCCCCEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEEEEEEE
KDNVDKYTSPFVLEQ
CCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6313683; 7686882; 9278503; 3011793; 3011794; 8899705; 9298646; 1583688; 7982928; 9641984 [H]