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The map label for this gene is lhr [C]

Identifier: 163844946

GI number: 163844946

Start: 800313

End: 802868

Strand: Reverse

Name: lhr [C]

Synonym: BSUIS_B0818

Alternate gene names: 163844946

Gene position: 802868-800313 (Counterclockwise)

Preceding gene: 163844947

Following gene: 163844945

Centisome position: 57.31

GC content: 61.15

Gene sequence:

>2556_bases
GTGACACTGACCCGCAAGCCCATCGCAGCATCTGCCACCTTTCTTCTGCCGGACCGTTTCGTCAAATGGTTTGCGGCCAA
GGGTTGGTCGCCGCGTGCGCACCAGCTGGAGCTTCTGGCGCGCGCCGAACAGGGACAGTCCACGCTTCTGATCGCACCCA
CCGGCGCGGGCAAGACGCTGGCCGGGTTTCTGCCCGCGCTGGTTGATCTGGAAAAGCGGCGAAGCAAAGCAATTTCAGGA
AAAGTGGGAACCGGTTTTCCGTCCGGAATTGCGCCAAAATCAAAAAGTGGCGTTCACACGCTCTATATCTCCCCGCTGAA
GGCGCTTGCTGTCGATATTCACCGCAATCTCACTGTGCCGGTGGAGGAAATGGGGCTTGATATTTCCATCGAGACCCGCA
CCGGCGACACACCTGCCCACAAGCGTCAGCGCCAGAAACTGGCGCCGCCGGATATTCTGCTGACCACGCCGGAGCAGCTT
GCACTTTTGATCGCGTCCAGGGGGGCGGAGCAATTTTTCAAAGATTTGCGCTATGTGGTGCTGGATGAACTGCACTCGCT
GGTGATTTCCAAGCGCGGGCATTTGCTGGCGCTGGGGCTGGCACGGCTGCGCCGCCTGCAACCGCAGTTGCAGACCATCG
GTCTTTCCGCCACCGTGGCGGAGCCGGATGAGTTGCGCCGCTGGCTGGTGGAGCAGGATGGGACCGGGTCGATGGCCGGT
CTTGTCACCGTCGATGGCGGGGCAAAACCGGAAATTACCATTCTCGATTCTAAGGAGCGGGTGCCATGGGCGGGGCACTC
CTCACGCTATGCCATTCCCGATATTTACGCGGCGATCCGCCAGCACCGAACGACGCTTTTGTTCGTTAATACGCGCAGTC
AGGCGGAGATGCTTTTTCAGGAGCTCTGGCGGGTCAATGAGGAGACGTTGCCGATTGCGCTGCATCACGGCTCGCTCGAT
GCCGGCCAGCGCCGCAAAGTGGAACAGGCCATGGCCGCCAATACATTGCGGGCGCTGGTCGCGACCTCGACGCTTGATCT
CGGCATCGATTGGGGCGATGTCGATCTGGTCATCCATGTCGGCGCGCCGAAGGGCGCAAGCCGCCTTGCGCAGCGCATCG
GGCGCGCCAATCACCGCATGGACGAGCCAAGCCGCGCCATTCTGGTGCCCGCCAATCGCTTCGAGGTGATGGAGTGTCGT
GCCGCGCTTGATGCCAATTATCTGGGCGCGCAGGATACGCCGCCCTTGATCGACGGGGCGCTGGATGTGCTGGCGCAGCA
TGTGCTGGGCATGGCCTGTGCCGAGCCGTTCAACGCCGATCAGCTTTATCGTGAGGTGCAAAGTGCGGCCCCTTATGCAA
ACCTTCCGCGAGACACCTTCGACCGCATTCTCGATTTTGTGGCGACCGGCGGCTATGCGCTCAAGACCTATGAGCGGTTT
GCGAAAATCCGCAAGACGGTGGACGGCACGTGGCGGGTGTCCAATCCGCGCATCGCGCAGCAATATCGCCTCAATATCGG
CACCATTGTCGAAGCGCCGGAACTGAATGTGCGGCTCACGCGCGGCGGCAAGGGCGCGAATGCGCGGGGCGGGCGCGTGC
TGGGCCGCATCGAGGAATATTTTCTGGAAACACTGACGGCTGGCGATACCTTCCTTTTCGCCGGAAAGGTGCTGCGCTTT
GAGGGTATTCGGGAAAATGAATGCATCGCCTCCAATGCTGCCGGGCAGGACGCAAAAATTCCCGTCTATGCGGGCGGCAA
ATTTCCGCTTTCCACCTATCTCGCCGCGCAGGTGCGCGCCATGCTTGCCGACCGCGCGCGCTGGCAATTCCTGCCGCAGC
AGGTGCGCGAATGGCTGGAGGTGCAGCAATGGAAATCCGTGCTGCCCGGCACGGACGAACTTTTGATCGAAACCTTCCCG
CGCGGCAACCGCTTCTACATGGTGGCCTATCCGTTTGAGGGCAGGCTGGCGCATCAGACGCTCGGCATGTTGCTGACGCG
CCGTCTGGAGCGCATGGGCGCGCATCCGCTGGGCTTTGTCGCCACTGATTATTCGCTGGGTCTCTGGGGCCTCAAGGATA
TGGCGTCCATGATCCGCATGGGCAGGCTTAACCTTTCGCGCCTGTTCGATGAAGACATGTTGGGCGACGATCTGGAAGCG
TGGCTGGATGAAAGCTATCTTCTCAAGCGCACGTTCCGTAATTGCGCCGTGATTTCCGGGCTTATCGAGCGCCGTCATCC
GGGGCAGGAAAAGACCGGGCGTCAGGTGACGGTTTCGACGGATCTTATCTACGACGTTCTGCGCAGCCACGAGCCGGACC
ACATTCTCTTGCAGGCCACACGCGCGGATGCGGCAACGGGGCTTTTGGACATCAAGCGGCTTGGCGACATGCTGGCGCGT
GTGAAAGGGCATATCCTGCACAAGCCGCTTGACCAGATTTCGCCGCTGGCGCTGCCGGTGATGCTCGAAATCGGGCGCGA
GCGCGTGGCGGGCGAGGGCGATGAAATGCTGCTTGAAGAAGCAGCCGACGATCTTGTCAGGGAAGCAATGCAATGA

Upstream 100 bases:

>100_bases
GAAGTTTGCGCGGAAAGGGAGGGGCTTTGCTGCTGATAAAATGAGAACAAAAGTGAACAAACGCCTTGGCGGCTTGCCTT
GCTGCGATTAGATTGGCGTC

Downstream 100 bases:

>100_bases
AGACTGCGGCGTGGGGAAATGGGGAGGCTTATAGTCTGGCGCACGCGGAAGTGCGCGGCGTTGCCGCTGTTTGCGATCCG
TCGGGCGCGCTTTTCCTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 851; Mature: 850

Protein sequence:

>851_residues
MTLTRKPIAASATFLLPDRFVKWFAAKGWSPRAHQLELLARAEQGQSTLLIAPTGAGKTLAGFLPALVDLEKRRSKAISG
KVGTGFPSGIAPKSKSGVHTLYISPLKALAVDIHRNLTVPVEEMGLDISIETRTGDTPAHKRQRQKLAPPDILLTTPEQL
ALLIASRGAEQFFKDLRYVVLDELHSLVISKRGHLLALGLARLRRLQPQLQTIGLSATVAEPDELRRWLVEQDGTGSMAG
LVTVDGGAKPEITILDSKERVPWAGHSSRYAIPDIYAAIRQHRTTLLFVNTRSQAEMLFQELWRVNEETLPIALHHGSLD
AGQRRKVEQAMAANTLRALVATSTLDLGIDWGDVDLVIHVGAPKGASRLAQRIGRANHRMDEPSRAILVPANRFEVMECR
AALDANYLGAQDTPPLIDGALDVLAQHVLGMACAEPFNADQLYREVQSAAPYANLPRDTFDRILDFVATGGYALKTYERF
AKIRKTVDGTWRVSNPRIAQQYRLNIGTIVEAPELNVRLTRGGKGANARGGRVLGRIEEYFLETLTAGDTFLFAGKVLRF
EGIRENECIASNAAGQDAKIPVYAGGKFPLSTYLAAQVRAMLADRARWQFLPQQVREWLEVQQWKSVLPGTDELLIETFP
RGNRFYMVAYPFEGRLAHQTLGMLLTRRLERMGAHPLGFVATDYSLGLWGLKDMASMIRMGRLNLSRLFDEDMLGDDLEA
WLDESYLLKRTFRNCAVISGLIERRHPGQEKTGRQVTVSTDLIYDVLRSHEPDHILLQATRADAATGLLDIKRLGDMLAR
VKGHILHKPLDQISPLALPVMLEIGRERVAGEGDEMLLEEAADDLVREAMQ

Sequences:

>Translated_851_residues
MTLTRKPIAASATFLLPDRFVKWFAAKGWSPRAHQLELLARAEQGQSTLLIAPTGAGKTLAGFLPALVDLEKRRSKAISG
KVGTGFPSGIAPKSKSGVHTLYISPLKALAVDIHRNLTVPVEEMGLDISIETRTGDTPAHKRQRQKLAPPDILLTTPEQL
ALLIASRGAEQFFKDLRYVVLDELHSLVISKRGHLLALGLARLRRLQPQLQTIGLSATVAEPDELRRWLVEQDGTGSMAG
LVTVDGGAKPEITILDSKERVPWAGHSSRYAIPDIYAAIRQHRTTLLFVNTRSQAEMLFQELWRVNEETLPIALHHGSLD
AGQRRKVEQAMAANTLRALVATSTLDLGIDWGDVDLVIHVGAPKGASRLAQRIGRANHRMDEPSRAILVPANRFEVMECR
AALDANYLGAQDTPPLIDGALDVLAQHVLGMACAEPFNADQLYREVQSAAPYANLPRDTFDRILDFVATGGYALKTYERF
AKIRKTVDGTWRVSNPRIAQQYRLNIGTIVEAPELNVRLTRGGKGANARGGRVLGRIEEYFLETLTAGDTFLFAGKVLRF
EGIRENECIASNAAGQDAKIPVYAGGKFPLSTYLAAQVRAMLADRARWQFLPQQVREWLEVQQWKSVLPGTDELLIETFP
RGNRFYMVAYPFEGRLAHQTLGMLLTRRLERMGAHPLGFVATDYSLGLWGLKDMASMIRMGRLNLSRLFDEDMLGDDLEA
WLDESYLLKRTFRNCAVISGLIERRHPGQEKTGRQVTVSTDLIYDVLRSHEPDHILLQATRADAATGLLDIKRLGDMLAR
VKGHILHKPLDQISPLALPVMLEIGRERVAGEGDEMLLEEAADDLVREAMQ
>Mature_850_residues
TLTRKPIAASATFLLPDRFVKWFAAKGWSPRAHQLELLARAEQGQSTLLIAPTGAGKTLAGFLPALVDLEKRRSKAISGK
VGTGFPSGIAPKSKSGVHTLYISPLKALAVDIHRNLTVPVEEMGLDISIETRTGDTPAHKRQRQKLAPPDILLTTPEQLA
LLIASRGAEQFFKDLRYVVLDELHSLVISKRGHLLALGLARLRRLQPQLQTIGLSATVAEPDELRRWLVEQDGTGSMAGL
VTVDGGAKPEITILDSKERVPWAGHSSRYAIPDIYAAIRQHRTTLLFVNTRSQAEMLFQELWRVNEETLPIALHHGSLDA
GQRRKVEQAMAANTLRALVATSTLDLGIDWGDVDLVIHVGAPKGASRLAQRIGRANHRMDEPSRAILVPANRFEVMECRA
ALDANYLGAQDTPPLIDGALDVLAQHVLGMACAEPFNADQLYREVQSAAPYANLPRDTFDRILDFVATGGYALKTYERFA
KIRKTVDGTWRVSNPRIAQQYRLNIGTIVEAPELNVRLTRGGKGANARGGRVLGRIEEYFLETLTAGDTFLFAGKVLRFE
GIRENECIASNAAGQDAKIPVYAGGKFPLSTYLAAQVRAMLADRARWQFLPQQVREWLEVQQWKSVLPGTDELLIETFPR
GNRFYMVAYPFEGRLAHQTLGMLLTRRLERMGAHPLGFVATDYSLGLWGLKDMASMIRMGRLNLSRLFDEDMLGDDLEAW
LDESYLLKRTFRNCAVISGLIERRHPGQEKTGRQVTVSTDLIYDVLRSHEPDHILLQATRADAATGLLDIKRLGDMLARV
KGHILHKPLDQISPLALPVMLEIGRERVAGEGDEMLLEEAADDLVREAMQ

Specific function: Unknown

COG id: COG1201

COG function: function code R; Lhr-like helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI38569503, Length=346, Percent_Identity=25.4335260115607, Blast_Score=71, Evalue=4e-12,
Organism=Homo sapiens, GI38569505, Length=353, Percent_Identity=25.7790368271955, Blast_Score=71, Evalue=4e-12,
Organism=Escherichia coli, GI1787942, Length=869, Percent_Identity=28.1933256616801, Blast_Score=250, Evalue=3e-67,
Organism=Caenorhabditis elegans, GI115533224, Length=337, Percent_Identity=24.9258160237389, Blast_Score=67, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6320497, Length=436, Percent_Identity=25, Blast_Score=97, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR013701
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR017170 [H]

Pfam domain/function: PF00270 DEAD; PF08494 DEAD_assoc; PF00271 Helicase_C [H]

EC number: 3.6.1.-

Molecular weight: Translated: 94377; Mature: 94246

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: PS00732 RIBOSOMAL_S16

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLTRKPIAASATFLLPDRFVKWFAAKGWSPRAHQLELLARAEQGQSTLLIAPTGAGKTL
CCCCCCCCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCHH
AGFLPALVDLEKRRSKAISGKVGTGFPSGIAPKSKSGVHTLYISPLKALAVDIHRNLTVP
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHCCCCCC
VEEMGLDISIETRTGDTPAHKRQRQKLAPPDILLTTPEQLALLIASRGAEQFFKDLRYVV
HHHHCCEEEEEECCCCCCHHHHHHHCCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHHHH
LDELHSLVISKRGHLLALGLARLRRLQPQLQTIGLSATVAEPDELRRWLVEQDGTGSMAG
HHHHHHHHHHCCCCEEHHHHHHHHHHCHHHHHCCCEEEECCHHHHHHHHHCCCCCCCEEE
LVTVDGGAKPEITILDSKERVPWAGHSSRYAIPDIYAAIRQHRTTLLFVNTRSQAEMLFQ
EEEECCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEEEECCHHHHHHHH
ELWRVNEETLPIALHHGSLDAGQRRKVEQAMAANTLRALVATSTLDLGIDWGDVDLVIHV
HHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEE
GAPKGASRLAQRIGRANHRMDEPSRAILVPANRFEVMECRAALDANYLGAQDTPPLIDGA
CCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCHHHHH
LDVLAQHVLGMACAEPFNADQLYREVQSAAPYANLPRDTFDRILDFVATGGYALKTYERF
HHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHH
AKIRKTVDGTWRVSNPRIAQQYRLNIGTIVEAPELNVRLTRGGKGANARGGRVLGRIEEY
HHHHHHCCCCEEECCCCHHHHHCCCCCEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHH
FLETLTAGDTFLFAGKVLRFEGIRENECIASNAAGQDAKIPVYAGGKFPLSTYLAAQVRA
HHHHHCCCCEEEECCHHHEECCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHH
MLADRARWQFLPQQVREWLEVQQWKSVLPGTDELLIETFPRGNRFYMVAYPFEGRLAHQT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEECCCCCEEEEEEECCCCCHHHHH
LGMLLTRRLERMGAHPLGFVATDYSLGLWGLKDMASMIRMGRLNLSRLFDEDMLGDDLEA
HHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCHHHH
WLDESYLLKRTFRNCAVISGLIERRHPGQEKTGRQVTVSTDLIYDVLRSHEPDHILLQAT
HHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHCCCCCEEEEEEC
RADAATGLLDIKRLGDMLARVKGHILHKPLDQISPLALPVMLEIGRERVAGEGDEMLLEE
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHH
AADDLVREAMQ
HHHHHHHHHCC
>Mature Secondary Structure 
TLTRKPIAASATFLLPDRFVKWFAAKGWSPRAHQLELLARAEQGQSTLLIAPTGAGKTL
CCCCCCCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCHH
AGFLPALVDLEKRRSKAISGKVGTGFPSGIAPKSKSGVHTLYISPLKALAVDIHRNLTVP
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHCCCCCC
VEEMGLDISIETRTGDTPAHKRQRQKLAPPDILLTTPEQLALLIASRGAEQFFKDLRYVV
HHHHCCEEEEEECCCCCCHHHHHHHCCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHHHH
LDELHSLVISKRGHLLALGLARLRRLQPQLQTIGLSATVAEPDELRRWLVEQDGTGSMAG
HHHHHHHHHHCCCCEEHHHHHHHHHHCHHHHHCCCEEEECCHHHHHHHHHCCCCCCCEEE
LVTVDGGAKPEITILDSKERVPWAGHSSRYAIPDIYAAIRQHRTTLLFVNTRSQAEMLFQ
EEEECCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEEEECCHHHHHHHH
ELWRVNEETLPIALHHGSLDAGQRRKVEQAMAANTLRALVATSTLDLGIDWGDVDLVIHV
HHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEE
GAPKGASRLAQRIGRANHRMDEPSRAILVPANRFEVMECRAALDANYLGAQDTPPLIDGA
CCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCHHHHH
LDVLAQHVLGMACAEPFNADQLYREVQSAAPYANLPRDTFDRILDFVATGGYALKTYERF
HHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHH
AKIRKTVDGTWRVSNPRIAQQYRLNIGTIVEAPELNVRLTRGGKGANARGGRVLGRIEEY
HHHHHHCCCCEEECCCCHHHHHCCCCCEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHH
FLETLTAGDTFLFAGKVLRFEGIRENECIASNAAGQDAKIPVYAGGKFPLSTYLAAQVRA
HHHHHCCCCEEEECCHHHEECCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHH
MLADRARWQFLPQQVREWLEVQQWKSVLPGTDELLIETFPRGNRFYMVAYPFEGRLAHQT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEECCCCCEEEEEEECCCCCHHHHH
LGMLLTRRLERMGAHPLGFVATDYSLGLWGLKDMASMIRMGRLNLSRLFDEDMLGDDLEA
HHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCHHHH
WLDESYLLKRTFRNCAVISGLIERRHPGQEKTGRQVTVSTDLIYDVLRSHEPDHILLQAT
HHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHCCCCCEEEEEEC
RADAATGLLDIKRLGDMLARVKGHILHKPLDQISPLALPVMLEIGRERVAGEGDEMLLEE
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHH
AADDLVREAMQ
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on acid anhydrides [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]