| Definition | Brucella suis ATCC 23445 chromosome II, complete genome. |
|---|---|
| Accession | NC_010167 |
| Length | 1,400,844 |
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The map label for this gene is ydhK [H]
Identifier: 163844889
GI number: 163844889
Start: 727695
End: 729791
Strand: Reverse
Name: ydhK [H]
Synonym: BSUIS_B0752
Alternate gene names: 163844889
Gene position: 729791-727695 (Counterclockwise)
Preceding gene: 163844890
Following gene: 163844888
Centisome position: 52.1
GC content: 59.08
Gene sequence:
>2097_bases ATGACGAAGCTTGCCGAAACAACCCCGAAGTTCTGGGACGTAGTCTTTTCGCTGAAGACTTTTGCGGCTGCCATGCTTGC ATTATGGATTGGCCTGATGGCGAACCCGCCCAATCCTTACTGGTCGGTGGCGGCGGTTTATATCGTGGCGCATCCGCTTT CGGGTGCGACGACATCCAAGGGCTTTTACCGTCTGATCGGTACGATCATCGGTGGCGCCGTGACGGTTGTCTTCGTCCCG CATCTGGTCAATTCGCCTGAAATCCTCACGCTTGCCATTGGCCTGTGGATGGGCCTTTGCCTTGTCATCAGCCTGCTCGA CGGCACGCCGCGCAGCTATCTCTTCATGCTGGCTGGCTATACCGTGGCGATTGCAAGCTTCGCAGTGGTGCAGGCTCCTG AAACCACCTTCGATTATGCGCTGGGCCGTGTAGAGGAAATTGCAGTCGGCATTATCTGCGCGGCAGTGGTGAACCGCCTC GTTTTTCCGCGCCATAGCGGGCCGGTTCTGGTGGGGCGTATCGATAATTGGCTGCGCGATGGCTCCAAGCTTGCCGTTGC CAGTATGCGCGGCGAGGGCGATAGCCCGGAATTCCGGCGCGATCGCCAGCGTCTTGCCGCCGATACGCTGGAACTGCGCA ACCTCACCACCCATGTCGCTTACGACACGTCTTCCATCCGCAATGTTGCGCCGCTCCTGCATGTGCTGCAACAGCGCATG GTCGCGGTTCTGCCCATCATTTCCAGCCTGCATGACGTGCTGCTGCTGAAACCGGGCGAGGGGGAAAAGCCGTGGCATCC GGCGGTGCAGCAGCTTCTGGATGAAGTTTGTGACTGGCTGCAAAGCGGTGAAAACCTCACCGAAGAACGTCGCGCGGTGT TTCTGCGGCTGATCGAGGAAATCGACCGCCACAGCAGGGATGCCTCTACATGGGGTGAGCTTCTGCCTTTCAATCTTTCA GCCCGTATCCGGGATCTGGTGCAGATATGGAGCGATTGCCTGACGCTGAAACAGGATATTTCTTCCGGCTCGCGCCATTC GCTGCGCTGGAGGCGCTATGACGCCCATCTGAAAGGCCGTCCGATGCACCGCGATTATGGCATGGCGCTTCTTTCCGGCT TCTCCTCGTTTCTTGCCACTTGTGTTGCGACAGCACTATGGGTGGCAAGCGGTTGGGCGCAAGGCAGCGCCGCGGCCATG ATGGCTGGCATTTTCTGCTGCATCTTTGCCACGATGGACGATCCGGTGCCGGTGATCCGCAAGTTCAACTGGCTGCTTAT GGTCGTGATTGCCGCCGCTTTCGTGTTTGAATTCGCCTTGCTGCCGCTGGTCAATGGTTTCATGCCGCTTGTGCTGGTGC TCGGTCTCTTTCTGGTGCCTGCGGGTATGCTGCTGGTTATCCCGTCGCAATTTCTGCTGGGCATGGTGCTCTGCGTGAAC CTGCCGAACATGCTGATGCTGCAAAGCCATCTGACGCTTGATTTTCCGTCCTTTGCCAATGCCAATCTGGCCACTGTGCT CGGGATCGTGATTGCGGCTGTGGTAACGTCCATCGTGCGCTCGGTCGGTGCGGAATGGAGCGTGCGCCGCTTGGTCAAGG CGGGCTGGAGCGATATCGTGCTTGCAACCGAGCGCCGTCCGGGCCGCTATCGGCGCGAGCACATGAACCGTCTTCTGCTG CGCATGATCGACCGCATTGGCATGATGGCACCGCGTCTGGCGCTCATTCCTGATGCAGATGTCGCAAAGGTCGACTTGCT GCGCGATCTGCGCAACGGCATGAACACCATTGATTTGCAGCAATACCGCGCCAAATTGCCGGCGCCTTGCCGCGAGGCGG TGGATGAGGTTCTGGATGGTGTCGGCGCGCATTATCGCGCTTTGTCGAACAAAACCCGCGATACAGTCGAGCACATAGAT GAGAGGCTGCTTGCGGCAATCGACAAGGCCATCGCCACGATCATCGAAAACGGTTCGCCTGCCGTGGCCCGCAGGCCACG GATTGCGCTCGTGGCGCTGCGTTTCAATCTCTTCCCCAAGGCCCCGCCCTTTGTTCTGCCACCGCTTCCGCAACTTGAAT TTGCGCAAGCGGCGTGA
Upstream 100 bases:
>100_bases TGTCGCCATGGAAGTGCTGCGCAAACTTAACGAGAAATTTCAGAACCAGCCTTCCTGAAACCGGGGGGCTGCGTGCATTT TAGCTGGTGTCCCCGCACTT
Downstream 100 bases:
>100_bases CCGGACCGACCAGAATGTGACCTGCCATGCACCCTGAATTCGATATTTACGGGATCTATATCCCGTCCCTCGGCCTTCTG GCGCTTGCTGCCTATTTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 698; Mature: 697
Protein sequence:
>698_residues MTKLAETTPKFWDVVFSLKTFAAAMLALWIGLMANPPNPYWSVAAVYIVAHPLSGATTSKGFYRLIGTIIGGAVTVVFVP HLVNSPEILTLAIGLWMGLCLVISLLDGTPRSYLFMLAGYTVAIASFAVVQAPETTFDYALGRVEEIAVGIICAAVVNRL VFPRHSGPVLVGRIDNWLRDGSKLAVASMRGEGDSPEFRRDRQRLAADTLELRNLTTHVAYDTSSIRNVAPLLHVLQQRM VAVLPIISSLHDVLLLKPGEGEKPWHPAVQQLLDEVCDWLQSGENLTEERRAVFLRLIEEIDRHSRDASTWGELLPFNLS ARIRDLVQIWSDCLTLKQDISSGSRHSLRWRRYDAHLKGRPMHRDYGMALLSGFSSFLATCVATALWVASGWAQGSAAAM MAGIFCCIFATMDDPVPVIRKFNWLLMVVIAAAFVFEFALLPLVNGFMPLVLVLGLFLVPAGMLLVIPSQFLLGMVLCVN LPNMLMLQSHLTLDFPSFANANLATVLGIVIAAVVTSIVRSVGAEWSVRRLVKAGWSDIVLATERRPGRYRREHMNRLLL RMIDRIGMMAPRLALIPDADVAKVDLLRDLRNGMNTIDLQQYRAKLPAPCREAVDEVLDGVGAHYRALSNKTRDTVEHID ERLLAAIDKAIATIIENGSPAVARRPRIALVALRFNLFPKAPPFVLPPLPQLEFAQAA
Sequences:
>Translated_698_residues MTKLAETTPKFWDVVFSLKTFAAAMLALWIGLMANPPNPYWSVAAVYIVAHPLSGATTSKGFYRLIGTIIGGAVTVVFVP HLVNSPEILTLAIGLWMGLCLVISLLDGTPRSYLFMLAGYTVAIASFAVVQAPETTFDYALGRVEEIAVGIICAAVVNRL VFPRHSGPVLVGRIDNWLRDGSKLAVASMRGEGDSPEFRRDRQRLAADTLELRNLTTHVAYDTSSIRNVAPLLHVLQQRM VAVLPIISSLHDVLLLKPGEGEKPWHPAVQQLLDEVCDWLQSGENLTEERRAVFLRLIEEIDRHSRDASTWGELLPFNLS ARIRDLVQIWSDCLTLKQDISSGSRHSLRWRRYDAHLKGRPMHRDYGMALLSGFSSFLATCVATALWVASGWAQGSAAAM MAGIFCCIFATMDDPVPVIRKFNWLLMVVIAAAFVFEFALLPLVNGFMPLVLVLGLFLVPAGMLLVIPSQFLLGMVLCVN LPNMLMLQSHLTLDFPSFANANLATVLGIVIAAVVTSIVRSVGAEWSVRRLVKAGWSDIVLATERRPGRYRREHMNRLLL RMIDRIGMMAPRLALIPDADVAKVDLLRDLRNGMNTIDLQQYRAKLPAPCREAVDEVLDGVGAHYRALSNKTRDTVEHID ERLLAAIDKAIATIIENGSPAVARRPRIALVALRFNLFPKAPPFVLPPLPQLEFAQAA >Mature_697_residues TKLAETTPKFWDVVFSLKTFAAAMLALWIGLMANPPNPYWSVAAVYIVAHPLSGATTSKGFYRLIGTIIGGAVTVVFVPH LVNSPEILTLAIGLWMGLCLVISLLDGTPRSYLFMLAGYTVAIASFAVVQAPETTFDYALGRVEEIAVGIICAAVVNRLV FPRHSGPVLVGRIDNWLRDGSKLAVASMRGEGDSPEFRRDRQRLAADTLELRNLTTHVAYDTSSIRNVAPLLHVLQQRMV AVLPIISSLHDVLLLKPGEGEKPWHPAVQQLLDEVCDWLQSGENLTEERRAVFLRLIEEIDRHSRDASTWGELLPFNLSA RIRDLVQIWSDCLTLKQDISSGSRHSLRWRRYDAHLKGRPMHRDYGMALLSGFSSFLATCVATALWVASGWAQGSAAAMM AGIFCCIFATMDDPVPVIRKFNWLLMVVIAAAFVFEFALLPLVNGFMPLVLVLGLFLVPAGMLLVIPSQFLLGMVLCVNL PNMLMLQSHLTLDFPSFANANLATVLGIVIAAVVTSIVRSVGAEWSVRRLVKAGWSDIVLATERRPGRYRREHMNRLLLR MIDRIGMMAPRLALIPDADVAKVDLLRDLRNGMNTIDLQQYRAKLPAPCREAVDEVLDGVGAHYRALSNKTRDTVEHIDE RLLAAIDKAIATIIENGSPAVARRPRIALVALRFNLFPKAPPFVLPPLPQLEFAQAA
Specific function: Unknown
COG id: COG1289
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aromatic acid exporter ArAE (TC 2.A.85) family [H]
Homologues:
Organism=Escherichia coli, GI1787933, Length=543, Percent_Identity=25.0460405156538, Blast_Score=115, Evalue=1e-26, Organism=Escherichia coli, GI1789636, Length=158, Percent_Identity=34.8101265822785, Blast_Score=90, Evalue=4e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006726 [H]
Pfam domain/function: PF04632 FUSC [H]
EC number: NA
Molecular weight: Translated: 77092; Mature: 76960
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKLAETTPKFWDVVFSLKTFAAAMLALWIGLMANPPNPYWSVAAVYIVAHPLSGATTSK CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCH GFYRLIGTIIGGAVTVVFVPHLVNSPEILTLAIGLWMGLCLVISLLDGTPRSYLFMLAGY HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH TVAIASFAVVQAPETTFDYALGRVEEIAVGIICAAVVNRLVFPRHSGPVLVGRIDNWLRD HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHC GSKLAVASMRGEGDSPEFRRDRQRLAADTLELRNLTTHVAYDTSSIRNVAPLLHVLQQRM CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHH VAVLPIISSLHDVLLLKPGEGEKPWHPAVQQLLDEVCDWLQSGENLTEERRAVFLRLIEE HHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH IDRHSRDASTWGELLPFNLSARIRDLVQIWSDCLTLKQDISSGSRHSLRWRRYDAHLKGR HHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCC PMHRDYGMALLSGFSSFLATCVATALWVASGWAQGSAAAMMAGIFCCIFATMDDPVPVIR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHH KFNWLLMVVIAAAFVFEFALLPLVNGFMPLVLVLGLFLVPAGMLLVIPSQFLLGMVLCVN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC LPNMLMLQSHLTLDFPSFANANLATVLGIVIAAVVTSIVRSVGAEWSVRRLVKAGWSDIV CCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEE LATERRPGRYRREHMNRLLLRMIDRIGMMAPRLALIPDADVAKVDLLRDLRNGMNTIDLQ EEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHCCCCCCHHH QYRAKLPAPCREAVDEVLDGVGAHYRALSNKTRDTVEHIDERLLAAIDKAIATIIENGSP HHHHHCCCHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC AVARRPRIALVALRFNLFPKAPPFVLPPLPQLEFAQAA CHHCCCCEEEEEEEHHCCCCCCCCCCCCCCCCHHCCCC >Mature Secondary Structure TKLAETTPKFWDVVFSLKTFAAAMLALWIGLMANPPNPYWSVAAVYIVAHPLSGATTSK CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCH GFYRLIGTIIGGAVTVVFVPHLVNSPEILTLAIGLWMGLCLVISLLDGTPRSYLFMLAGY HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH TVAIASFAVVQAPETTFDYALGRVEEIAVGIICAAVVNRLVFPRHSGPVLVGRIDNWLRD HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHC GSKLAVASMRGEGDSPEFRRDRQRLAADTLELRNLTTHVAYDTSSIRNVAPLLHVLQQRM CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHH VAVLPIISSLHDVLLLKPGEGEKPWHPAVQQLLDEVCDWLQSGENLTEERRAVFLRLIEE HHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH IDRHSRDASTWGELLPFNLSARIRDLVQIWSDCLTLKQDISSGSRHSLRWRRYDAHLKGR HHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCC PMHRDYGMALLSGFSSFLATCVATALWVASGWAQGSAAAMMAGIFCCIFATMDDPVPVIR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHH KFNWLLMVVIAAAFVFEFALLPLVNGFMPLVLVLGLFLVPAGMLLVIPSQFLLGMVLCVN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC LPNMLMLQSHLTLDFPSFANANLATVLGIVIAAVVTSIVRSVGAEWSVRRLVKAGWSDIV CCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEE LATERRPGRYRREHMNRLLLRMIDRIGMMAPRLALIPDADVAKVDLLRDLRNGMNTIDLQ EEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHCCCCCCHHH QYRAKLPAPCREAVDEVLDGVGAHYRALSNKTRDTVEHIDERLLAAIDKAIATIIENGSP HHHHHCCCHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC AVARRPRIALVALRFNLFPKAPPFVLPPLPQLEFAQAA CHHCCCCEEEEEEEHHCCCCCCCCCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]