BacMap

Definition	Brucella suis ATCC 23445 chromosome II, complete genome.
Accession	NC_010167
Length	1,400,844

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The map label for this gene is ucpA [H]

Identifier: 163844877

GI number: 163844877

Start: 716886

End: 717659

Strand: Reverse

Name: ucpA [H]

Synonym: BSUIS_B0738

Alternate gene names: 163844877

Gene position: 717659-716886 (Counterclockwise)

Preceding gene: 163844883

Following gene: 163844876

Centisome position: 51.23

GC content: 62.53

Gene sequence:

>774_bases
GTGGATCATTCAGGTGAATTTGCCGGAAGATCGGTTCTTGTAACCGGTGCTGGCGGCGGCTTGGGCAGGGCTCTTGCGGC
GCTGTTTGCCGCGCGCGGCGCGCGCGTCATCGGCTGTGATGTATCGATGGATCTGATGGCCGCTTCGGATTTCGCCAGCC
GCCATGTATTCGACCTGCTTGACCGTGCGGAGCTTGCGGCGGCTGCCAACAAGCTCATTCTTGCCGACGGCGTGCCGGAT
ATCGTCATCAACAATGCGGGCTGGACCCGCGCCGAGACATTCGAGGGCTTGGAACAGGACCGGATCGAGGTGGAAATCGA
CCTTAACCTGACCGGCGTGGCGAGCTTTTCCAATATCATGGCGCAGGCCATGGCCACGCGCGGCCATGGCGCTTTTGTTT
TCGTTTCGTCCGTCAACTCGCTCCAGCATTTCGGCAACCCGGCCTATGCGGCGGCCAAGGCAGGCATCAATGCTTTTGCG
CGCGGCATTGCGGTGGAATTCGGCCAGCGGGGTGTGCGCGCCAATGTGGTTTGCCCCGGTTCCATTCGCACCCCCGCATG
GGATCACCGCATCGCACAGGACCCGTCCGTGCTGGACCGTTTGCAGCGGCTTTATCCGCTGGGGCGCATCGTTAATGTTG
GCGAGGTGGCCGAGGCGGTAGCATTTCTGGCGTCCGAGCGGGCATCGGGCATCACCGGCGCGGTTTTGCCGGTGGATGCG
GGCCTGACGGCGGGGTGCCGTCCGTTCATCGAAGATATTCTGGGAGGGAATTGA

Upstream 100 bases:

>100_bases
CTGGGTTTCAAGCGAAAACATTTGTTGCAAACTTACATTTTTAAAACTAGGCTGATGCGAATAAGCGGTTTTGAAAATGA
CCATATAAAAGGGGAATGCC

Downstream 100 bases:

>100_bases
GCTGATGAAAGAGGTTTCGCTACGCGGAATTAGCAAGACTTTCGGACAGTTGACTGTTCTCGATCGGATTGATCTGGAGA
TCCATAGCGGAGAGTTTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MDHSGEFAGRSVLVTGAGGGLGRALAALFAARGARVIGCDVSMDLMAASDFASRHVFDLLDRAELAAAANKLILADGVPD
IVINNAGWTRAETFEGLEQDRIEVEIDLNLTGVASFSNIMAQAMATRGHGAFVFVSSVNSLQHFGNPAYAAAKAGINAFA
RGIAVEFGQRGVRANVVCPGSIRTPAWDHRIAQDPSVLDRLQRLYPLGRIVNVGEVAEAVAFLASERASGITGAVLPVDA
GLTAGCRPFIEDILGGN

Sequences:

>Translated_257_residues
MDHSGEFAGRSVLVTGAGGGLGRALAALFAARGARVIGCDVSMDLMAASDFASRHVFDLLDRAELAAAANKLILADGVPD
IVINNAGWTRAETFEGLEQDRIEVEIDLNLTGVASFSNIMAQAMATRGHGAFVFVSSVNSLQHFGNPAYAAAKAGINAFA
RGIAVEFGQRGVRANVVCPGSIRTPAWDHRIAQDPSVLDRLQRLYPLGRIVNVGEVAEAVAFLASERASGITGAVLPVDA
GLTAGCRPFIEDILGGN
>Mature_257_residues
MDHSGEFAGRSVLVTGAGGGLGRALAALFAARGARVIGCDVSMDLMAASDFASRHVFDLLDRAELAAAANKLILADGVPD
IVINNAGWTRAETFEGLEQDRIEVEIDLNLTGVASFSNIMAQAMATRGHGAFVFVSSVNSLQHFGNPAYAAAKAGINAFA
RGIAVEFGQRGVRANVVCPGSIRTPAWDHRIAQDPSVLDRLQRLYPLGRIVNVGEVAEAVAFLASERASGITGAVLPVDA
GLTAGCRPFIEDILGGN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI15277342, Length=250, Percent_Identity=33.2, Blast_Score=103, Evalue=1e-22,
Organism=Homo sapiens, GI7705925, Length=244, Percent_Identity=30.327868852459, Blast_Score=92, Evalue=6e-19,
Organism=Homo sapiens, GI4503301, Length=253, Percent_Identity=30.4347826086957, Blast_Score=81, Evalue=8e-16,
Organism=Homo sapiens, GI40254992, Length=235, Percent_Identity=30.2127659574468, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI66933014, Length=247, Percent_Identity=27.1255060728745, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI4504505, Length=188, Percent_Identity=30.3191489361702, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI40807363, Length=218, Percent_Identity=29.8165137614679, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI310128830, Length=227, Percent_Identity=28.6343612334802, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI310115468, Length=227, Percent_Identity=28.6343612334802, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI10190704, Length=247, Percent_Identity=29.9595141700405, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI210032110, Length=214, Percent_Identity=27.1028037383178, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI20149619, Length=188, Percent_Identity=28.7234042553192, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI32483357, Length=257, Percent_Identity=27.2373540856031, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI59889578, Length=238, Percent_Identity=30.2521008403361, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI31542939, Length=196, Percent_Identity=28.0612244897959, Blast_Score=65, Evalue=8e-11,
Organism=Escherichia coli, GI87082100, Length=253, Percent_Identity=34.3873517786561, Blast_Score=133, Evalue=1e-32,
Organism=Escherichia coli, GI1787335, Length=242, Percent_Identity=36.7768595041322, Blast_Score=123, Evalue=1e-29,
Organism=Escherichia coli, GI1786812, Length=248, Percent_Identity=31.8548387096774, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1787905, Length=244, Percent_Identity=28.2786885245902, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI2367175, Length=247, Percent_Identity=31.1740890688259, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1790717, Length=245, Percent_Identity=25.7142857142857, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI2367365, Length=247, Percent_Identity=32.7935222672065, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1788459, Length=244, Percent_Identity=29.9180327868852, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI87082160, Length=243, Percent_Identity=27.1604938271605, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1789208, Length=245, Percent_Identity=26.530612244898, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1786701, Length=185, Percent_Identity=28.6486486486486, Blast_Score=65, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI25147288, Length=250, Percent_Identity=32.4, Blast_Score=115, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI17555706, Length=258, Percent_Identity=33.3333333333333, Blast_Score=113, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI17536651, Length=252, Percent_Identity=29.3650793650794, Blast_Score=85, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI115534694, Length=254, Percent_Identity=26.7716535433071, Blast_Score=84, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI71994604, Length=251, Percent_Identity=35.0597609561753, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17544670, Length=273, Percent_Identity=28.2051282051282, Blast_Score=80, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI17531453, Length=262, Percent_Identity=29.0076335877863, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI71994600, Length=251, Percent_Identity=32.2709163346614, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17538480, Length=265, Percent_Identity=29.0566037735849, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17536025, Length=252, Percent_Identity=28.1746031746032, Blast_Score=77, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI17560150, Length=260, Percent_Identity=27.3076923076923, Blast_Score=77, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17559104, Length=261, Percent_Identity=26.0536398467433, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17562906, Length=267, Percent_Identity=28.4644194756554, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17560220, Length=261, Percent_Identity=26.4367816091954, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17562908, Length=270, Percent_Identity=27.7777777777778, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI193204405, Length=263, Percent_Identity=26.9961977186312, Blast_Score=71, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17562990, Length=259, Percent_Identity=26.2548262548263, Blast_Score=71, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17508895, Length=248, Percent_Identity=26.6129032258064, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17564282, Length=215, Percent_Identity=27.906976744186, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17565030, Length=268, Percent_Identity=28.7313432835821, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17560676, Length=257, Percent_Identity=26.4591439688716, Blast_Score=64, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6324126, Length=251, Percent_Identity=26.6932270916335, Blast_Score=77, Evalue=3e-15,
Organism=Saccharomyces cerevisiae, GI6322861, Length=189, Percent_Identity=30.6878306878307, Blast_Score=75, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24639444, Length=250, Percent_Identity=34.4, Blast_Score=103, Evalue=8e-23,
Organism=Drosophila melanogaster, GI24644339, Length=254, Percent_Identity=33.0708661417323, Blast_Score=102, Evalue=3e-22,
Organism=Drosophila melanogaster, GI23397609, Length=244, Percent_Identity=33.1967213114754, Blast_Score=97, Evalue=1e-20,
Organism=Drosophila melanogaster, GI21357041, Length=254, Percent_Identity=30.3149606299213, Blast_Score=92, Evalue=3e-19,
Organism=Drosophila melanogaster, GI24643142, Length=248, Percent_Identity=29.4354838709677, Blast_Score=91, Evalue=9e-19,
Organism=Drosophila melanogaster, GI28571526, Length=254, Percent_Identity=30.7086614173228, Blast_Score=89, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24644337, Length=194, Percent_Identity=34.020618556701, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI18859837, Length=188, Percent_Identity=30.8510638297872, Blast_Score=71, Evalue=7e-13,
Organism=Drosophila melanogaster, GI21358495, Length=196, Percent_Identity=31.6326530612245, Blast_Score=71, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 26788; Mature: 26788

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDHSGEFAGRSVLVTGAGGGLGRALAALFAARGARVIGCDVSMDLMAASDFASRHVFDLL
CCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHH
DRAELAAAANKLILADGVPDIVINNAGWTRAETFEGLEQDRIEVEIDLNLTGVASFSNIM
HHHHHHHHHCCEEEECCCCCEEEECCCCCHHHHHCCCCCCCEEEEEEEEEECHHHHHHHH
AQAMATRGHGAFVFVSSVNSLQHFGNPAYAAAKAGINAFARGIAVEFGQRGVRANVVCPG
HHHHHHCCCCEEEEEECHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC
SIRTPAWDHRIAQDPSVLDRLQRLYPLGRIVNVGEVAEAVAFLASERASGITGAVLPVDA
CCCCCCCCCHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEECC
GLTAGCRPFIEDILGGN
CCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MDHSGEFAGRSVLVTGAGGGLGRALAALFAARGARVIGCDVSMDLMAASDFASRHVFDLL
CCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHH
DRAELAAAANKLILADGVPDIVINNAGWTRAETFEGLEQDRIEVEIDLNLTGVASFSNIM
HHHHHHHHHCCEEEECCCCCEEEECCCCCHHHHHCCCCCCCEEEEEEEEEECHHHHHHHH
AQAMATRGHGAFVFVSSVNSLQHFGNPAYAAAKAGINAFARGIAVEFGQRGVRANVVCPG
HHHHHHCCCCEEEEEECHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC
SIRTPAWDHRIAQDPSVLDRLQRLYPLGRIVNVGEVAEAVAFLASERASGITGAVLPVDA
CCCCCCCCCHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEECC
GLTAGCRPFIEDILGGN
CCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]