| Definition | Brucella suis ATCC 23445 chromosome II, complete genome. |
|---|---|
| Accession | NC_010167 |
| Length | 1,400,844 |
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The map label for this gene is 163844822
Identifier: 163844822
GI number: 163844822
Start: 659253
End: 660518
Strand: Reverse
Name: 163844822
Synonym: BSUIS_B0677
Alternate gene names: NA
Gene position: 660518-659253 (Counterclockwise)
Preceding gene: 163844823
Following gene: 163844821
Centisome position: 47.15
GC content: 57.19
Gene sequence:
>1266_bases ATGCATAAACTTCTGAAACTTGCCGCGATGGGTACGGCTGCCTGTGCTCTGCTCGCCGGAATGGCGCCTGTTGCCAATGC GCAGGAAAAGCAGAATGTCGAGGTTCTGCACTGGTGGACGTCCGGCGGCGAAGCGTCCGCGCTTGAAGTTTTGAAAAAAG ATCTTGAAAGCAAGGGCATTAGCTGGACCGATATGCCGGTTGCAGGTGGCGGCGGCACGGAAGCCATGACCGTTTTGCGC GCGCGCGTTACCGCAGGCAATGCGCCAACCGCGGTGCAGATGCTGGGTTTTGACATTCGCGACTGGGCGGAGCAGGGCGC ACTCGGCAATCTCGATACGGTTGCTTCCAAGGAAGGCTGGGAAAAGGTTATTCCGGCTCCCTTGCAGGAATTTGCCAAAT ATGACGGCCACTGGATTGCTGCGCCCGTCAATATTCACTCCACCAACTGGATGTGGATCAACAAGGCTGCTCTCGACAAG GCTGGCGGCAAGGAGCCGACCAATTGGGATGAGCTGATTGCGCTTCTCGACAATTTCAAGGCGCAGGGCATTACGCCGAT CGCGCATGGCGGCCAGCCGTGGCAGGATGCAACCATTTTCGATGCGGTTGTTCTTTCATTCGGCCCGGATTTCTACAAGA AGGCCTTCATCGATCTCGACCCGGAAGCACTGGGCAGCGATACCATGAAGCAGGCCTTCGACCGCATGTCCAAGCTTCGC ACCTATGTTGATGACAACTTCTCCGGCCGTGACTGGAACCTTGCTTCGGCCATGGTTATCGAAGGCAAGGCCGGTGTCCA GTTCATGGGCGACTGGGCGAAGGGCGAGTTCCTCAAGGCGGGCAAGAAGCCGGGTGAGGATTTCGTCTGCATGCGTTATC CGGGCACGCAGGGTGCTGTCACTTTCAATTCCGACATGTTCGCCATGTTCAAGGTTTCGGAAGACAAGGTTCCCGCACAG CTTGAAATGGCTTCGGCGATTGAAAGCCCTGCCTTCCAGTCTGCCTTTAATGTGGTGAAGGGGTCGGCCCCGGCACGCAC GGATGTGCCCGATACCGCTTTCGATGCCTGTGGCAAGAAGGCCATTGCCGATGTCAAGGAAGCAAACAGCAAGGGCACTC TGCTTGGCTCCATGGCGCATGGCTATGCCAATCCGGCTGCCGTGAAGAATGCGATCTACGACGTCGTGACCCGCCAGTTC AACGGCCAGCTTTCTTCGGAAGATGCCGTCAAGGAACTCGTTGCGGCGGTTGAAGCCGCAAAATAA
Upstream 100 bases:
>100_bases CGCGGAAGGGATGACGATACGGATTGTTCCGGCAAGCCGATGAATATTCGGCGGGCAATCCGGCTGTAATGGTTTTCGTT TGTTTCTATGGGAGGTAGAC
Downstream 100 bases:
>100_bases GGCCACGCGGAAACGTCCGGGGGAAACTCCCGGACGTTTTTCCTGCGTGCTCCAGCAGAAGCGCATAGGCGGTTGGCGCA GCTAACCGGCACTTACGACG
Product: hypothetical protein
Products: NA
Alternate protein names: Immunogenic 39 kDa protein; P39
Number of amino acids: Translated: 421; Mature: 421
Protein sequence:
>421_residues MHKLLKLAAMGTAACALLAGMAPVANAQEKQNVEVLHWWTSGGEASALEVLKKDLESKGISWTDMPVAGGGGTEAMTVLR ARVTAGNAPTAVQMLGFDIRDWAEQGALGNLDTVASKEGWEKVIPAPLQEFAKYDGHWIAAPVNIHSTNWMWINKAALDK AGGKEPTNWDELIALLDNFKAQGITPIAHGGQPWQDATIFDAVVLSFGPDFYKKAFIDLDPEALGSDTMKQAFDRMSKLR TYVDDNFSGRDWNLASAMVIEGKAGVQFMGDWAKGEFLKAGKKPGEDFVCMRYPGTQGAVTFNSDMFAMFKVSEDKVPAQ LEMASAIESPAFQSAFNVVKGSAPARTDVPDTAFDACGKKAIADVKEANSKGTLLGSMAHGYANPAAVKNAIYDVVTRQF NGQLSSEDAVKELVAAVEAAK
Sequences:
>Translated_421_residues MHKLLKLAAMGTAACALLAGMAPVANAQEKQNVEVLHWWTSGGEASALEVLKKDLESKGISWTDMPVAGGGGTEAMTVLR ARVTAGNAPTAVQMLGFDIRDWAEQGALGNLDTVASKEGWEKVIPAPLQEFAKYDGHWIAAPVNIHSTNWMWINKAALDK AGGKEPTNWDELIALLDNFKAQGITPIAHGGQPWQDATIFDAVVLSFGPDFYKKAFIDLDPEALGSDTMKQAFDRMSKLR TYVDDNFSGRDWNLASAMVIEGKAGVQFMGDWAKGEFLKAGKKPGEDFVCMRYPGTQGAVTFNSDMFAMFKVSEDKVPAQ LEMASAIESPAFQSAFNVVKGSAPARTDVPDTAFDACGKKAIADVKEANSKGTLLGSMAHGYANPAAVKNAIYDVVTRQF NGQLSSEDAVKELVAAVEAAK >Mature_421_residues MHKLLKLAAMGTAACALLAGMAPVANAQEKQNVEVLHWWTSGGEASALEVLKKDLESKGISWTDMPVAGGGGTEAMTVLR ARVTAGNAPTAVQMLGFDIRDWAEQGALGNLDTVASKEGWEKVIPAPLQEFAKYDGHWIAAPVNIHSTNWMWINKAALDK AGGKEPTNWDELIALLDNFKAQGITPIAHGGQPWQDATIFDAVVLSFGPDFYKKAFIDLDPEALGSDTMKQAFDRMSKLR TYVDDNFSGRDWNLASAMVIEGKAGVQFMGDWAKGEFLKAGKKPGEDFVCMRYPGTQGAVTFNSDMFAMFKVSEDKVPAQ LEMASAIESPAFQSAFNVVKGSAPARTDVPDTAFDACGKKAIADVKEANSKGTLLGSMAHGYANPAAVKNAIYDVVTRQF NGQLSSEDAVKELVAAVEAAK
Specific function: Part of a binding-protein-dependent transport system for a sugar (Potential)
COG id: COG1653
COG function: function code G; ABC-type sugar transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Probable)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): SP39_BRUAB (O06875)
Other databases:
- EMBL: AF360361 - EMBL: AE017224 - RefSeq: YP_223316.1 - ProteinModelPortal: O06875 - SMR: O06875 - GeneID: 3341783 - GenomeReviews: AE017224_GR - KEGG: bmb:BruAb2_0537 - HOGENOM: HBG742572 - OMA: EVFNLNK - ProtClustDB: CLSK863651 - BioCyc: BABO262698:BRUAB2_0537-MONOMER - InterPro: IPR006059
Pfam domain/function: PF01547 SBP_bac_1
EC number: NA
Molecular weight: Translated: 45148; Mature: 45148
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: PS01037 SBP_BACTERIAL_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKLLKLAAMGTAACALLAGMAPVANAQEKQNVEVLHWWTSGGEASALEVLKKDLESKGI CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCC SWTDMPVAGGGGTEAMTVLRARVTAGNAPTAVQMLGFDIRDWAEQGALGNLDTVASKEGW CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHCCCCCCCHHHHCCCCH EKVIPAPLQEFAKYDGHWIAAPVNIHSTNWMWINKAALDKAGGKEPTNWDELIALLDNFK HHCCCHHHHHHHHCCCCEEEEEEEECCCCEEEEEHHHHHCCCCCCCCCHHHHHHHHHHHH AQGITPIAHGGQPWQDATIFDAVVLSFGPDFYKKAFIDLDPEALGSDTMKQAFDRMSKLR HCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHH TYVDDNFSGRDWNLASAMVIEGKAGVQFMGDWAKGEFLKAGKKPGEDFVCMRYPGTQGAV HHHCCCCCCCCCCCEEEEEEECCCCCEEECCCCCCHHHHCCCCCCCCEEEEECCCCCCCE TFNSDMFAMFKVSEDKVPAQLEMASAIESPAFQSAFNVVKGSAPARTDVPDTAFDACGKK EECCCEEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHCHH AIADVKEANSKGTLLGSMAHGYANPAAVKNAIYDVVTRQFNGQLSSEDAVKELVAAVEAA HHHHHHHCCCCCCEEEHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC K C >Mature Secondary Structure MHKLLKLAAMGTAACALLAGMAPVANAQEKQNVEVLHWWTSGGEASALEVLKKDLESKGI CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCC SWTDMPVAGGGGTEAMTVLRARVTAGNAPTAVQMLGFDIRDWAEQGALGNLDTVASKEGW CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHCCCCCCCHHHHCCCCH EKVIPAPLQEFAKYDGHWIAAPVNIHSTNWMWINKAALDKAGGKEPTNWDELIALLDNFK HHCCCHHHHHHHHCCCCEEEEEEEECCCCEEEEEHHHHHCCCCCCCCCHHHHHHHHHHHH AQGITPIAHGGQPWQDATIFDAVVLSFGPDFYKKAFIDLDPEALGSDTMKQAFDRMSKLR HCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHH TYVDDNFSGRDWNLASAMVIEGKAGVQFMGDWAKGEFLKAGKKPGEDFVCMRYPGTQGAV HHHCCCCCCCCCCCEEEEEEECCCCCEEECCCCCCHHHHCCCCCCCCEEEEECCCCCCCE TFNSDMFAMFKVSEDKVPAQLEMASAIESPAFQSAFNVVKGSAPARTDVPDTAFDACGKK EECCCEEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHCHH AIADVKEANSKGTLLGSMAHGYANPAAVKNAIYDVVTRQFNGQLSSEDAVKELVAAVEAA HHHHHHHCCCCCCEEEHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC K C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9009303; 10235622