Click here to switch to the map view.

The map label for this gene is omp31 [H]

Identifier: 163844591

GI number: 163844591

Start: 410092

End: 410814

Strand: Reverse

Name: omp31 [H]

Synonym: BSUIS_B0425

Alternate gene names: 163844591

Gene position: 410814-410092 (Counterclockwise)

Preceding gene: 163844592

Following gene: 163844589

Centisome position: 29.33

GC content: 56.43

Gene sequence:

>723_bases
ATGAAGTCCGTAATTTTGGCGTCCATCGCCGCTATGTTCGCCACGTCCGCTATGGCTGCCGACGTGGTTGTTTCTGAACC
TTCCGCCCCTACTGCTGCTCCTGTTGACACCTTCTCGTGGACCGGCGGCTATATCGGTATCAACGCCGGTTACGCAGGCG
GCAAGTTCAAGCATCCATTTTCTAGCTTTGACAAGGAAGACATCGAACAGGTTTCCGGTTCGCTCGACGTAACAGCTGGC
GGCTTCGTCGGTGGTGTTCAGGCCGGTTACAACTGGCAGCTCGACAACGGCGTCGTGCTCGGCGCGGAAACCGACTTCCA
GGGATCGAGCGTTACGGGTTCGATTTCAGCCGGTGCCAGCGGTCTCGAAGGCAAAGCTGAAACCAAGGTCGAGTGGTTCG
GCACAGTTCGTGCCCGTCTTGGCTACACGGCTACCGAACGCCTCATGGTTTATGGTACCGGCGGTCTGGCCTATGGTAAG
GTCAAGTCTGCGTTCAACCTGGGTGATGATGCAAGTGCCCTGCACACGTGGCCCGACAAGACGAAAGCTGGCTGGACCCT
CGGCGCTGGTGCTGAATATGCCATCAACAACAACTGGACGCTCAAGTCGGAATACCTCTACACCGACCTCGGCAAGCGCA
ACCTCGTCGACGTTGACAATAGCTTCCTTGAGAGCAAGGTCAATTTCCACACTGTTCGCGTCGGTCTGAACTACAAGTTC
TAA

Upstream 100 bases:

>100_bases
CCCTTAAATCAACATTACAACGAGATGTTGCATAAAAGTGACAGACTTTTTCGCCGAATGTGATTAGGTAAGCTTTGTCT
AATTTACCTAGAGGTTTAAA

Downstream 100 bases:

>100_bases
TCCACGAACACGGAATGAAGAAGGGCCGCTCCACTCCAGTCGGGCGGCCCTTCTTATTTGGCAAGCATTATCAGGCGGCG
GGAATTGTCCTGAATGGATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MKSVILASIAAMFATSAMAADVVVSEPSAPTAAPVDTFSWTGGYIGINAGYAGGKFKHPFSSFDKEDIEQVSGSLDVTAG
GFVGGVQAGYNWQLDNGVVLGAETDFQGSSVTGSISAGASGLEGKAETKVEWFGTVRARLGYTATERLMVYGTGGLAYGK
VKSAFNLGDDASALHTWPDKTKAGWTLGAGAEYAINNNWTLKSEYLYTDLGKRNLVDVDNSFLESKVNFHTVRVGLNYKF

Sequences:

>Translated_240_residues
MKSVILASIAAMFATSAMAADVVVSEPSAPTAAPVDTFSWTGGYIGINAGYAGGKFKHPFSSFDKEDIEQVSGSLDVTAG
GFVGGVQAGYNWQLDNGVVLGAETDFQGSSVTGSISAGASGLEGKAETKVEWFGTVRARLGYTATERLMVYGTGGLAYGK
VKSAFNLGDDASALHTWPDKTKAGWTLGAGAEYAINNNWTLKSEYLYTDLGKRNLVDVDNSFLESKVNFHTVRVGLNYKF
>Mature_240_residues
MKSVILASIAAMFATSAMAADVVVSEPSAPTAAPVDTFSWTGGYIGINAGYAGGKFKHPFSSFDKEDIEQVSGSLDVTAG
GFVGGVQAGYNWQLDNGVVLGAETDFQGSSVTGSISAGASGLEGKAETKVEWFGTVRARLGYTATERLMVYGTGGLAYGK
VKSAFNLGDDASALHTWPDKTKAGWTLGAGAEYAINNNWTLKSEYLYTDLGKRNLVDVDNSFLESKVNFHTVRVGLNYKF

Specific function: Major outer membrane protein associated with peptidoglycans. May function as a porin [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the omp25/ropB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017690
- InterPro:   IPR011250
- InterPro:   IPR000498 [H]

Pfam domain/function: PF01389 OmpA_membrane [H]

EC number: NA

Molecular weight: Translated: 25332; Mature: 25332

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSVILASIAAMFATSAMAADVVVSEPSAPTAAPVDTFSWTGGYIGINAGYAGGKFKHPF
CCHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCC
SSFDKEDIEQVSGSLDVTAGGFVGGVQAGYNWQLDNGVVLGAETDFQGSSVTGSISAGAS
CCCCHHHHHHHCCCEEEECCCCCCCCCCCCEEEECCCEEEECCCCCCCCCEEEECCCCCC
GLEGKAETKVEWFGTVRARLGYTATERLMVYGTGGLAYGKVKSAFNLGDDASALHTWPDK
CCCCCCCCEEEEEEEEHHHCCCCEECEEEEEECCCEEECHHHHHCCCCCCCCCEECCCCC
TKAGWTLGAGAEYAINNNWTLKSEYLYTDLGKRNLVDVDNSFLESKVNFHTVRVGLNYKF
CCCCEEECCCCEEEECCCEEEECCEEEECCCCCCEEECCHHHHHCCCCEEEEEEEEEECC
>Mature Secondary Structure
MKSVILASIAAMFATSAMAADVVVSEPSAPTAAPVDTFSWTGGYIGINAGYAGGKFKHPF
CCHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCC
SSFDKEDIEQVSGSLDVTAGGFVGGVQAGYNWQLDNGVVLGAETDFQGSSVTGSISAGAS
CCCCHHHHHHHCCCEEEECCCCCCCCCCCCEEEECCCEEEECCCCCCCCCEEEECCCCCC
GLEGKAETKVEWFGTVRARLGYTATERLMVYGTGGLAYGKVKSAFNLGDDASALHTWPDK
CCCCCCCCEEEEEEEEHHHCCCCEECEEEEEECCCEEECHHHHHCCCCCCCCCEECCCCC
TKAGWTLGAGAEYAINNNWTLKSEYLYTDLGKRNLVDVDNSFLESKVNFHTVRVGLNYKF
CCCCEEECCCCEEEECCCEEEECCEEEECCCCCCEEECCHHHHHCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8751924; 11756688 [H]