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The map label for this gene is yhbU [H]

Identifier: 163844473

GI number: 163844473

Start: 272946

End: 273923

Strand: Reverse

Name: yhbU [H]

Synonym: BSUIS_B0296

Alternate gene names: 163844473

Gene position: 273923-272946 (Counterclockwise)

Preceding gene: 163844474

Following gene: 163844472

Centisome position: 19.55

GC content: 60.74

Gene sequence:

>978_bases
ATGGAACTGATTTGTCCGGCAGGTACGCCGTCCGCACTGCGTGAAGCCGTGCAGGCGGGCGCGGATGCCGTTTATTGCGG
TTTTCGCGATGAGACCAATGCGCGTAATTTTCCGGGGCTGAATTTCAGCCGCGATGAATTGCGCGATGCAATCGGCTTTG
CCCATGCGCGCAATTGCCAGGTCTTTGTCGCCATCAATACATTCATGCGCGCAGGCGACGAACATATCTGGTATAAGGCC
GTGGACGATGCCGCAGCCCTTGGCGCGGATGCCGTCATTCTTGCCGATTTCGGCCTGATGGCCTATACGGCAGAGCGCCA
TCCGAACCAGCGCCTGCATGTTTCCGTTCAGGCGTCCGCTTCAAACGCCGATGCAATCAGCTTCCTGATCGACGCCTTCA
AAGCAAAACGCGTGGTGCTGCCGCGCGTGCTCACCATCGCCGATATCGCCAAGCTTGGCCGCAAGATCCCTTGCGAGATG
GAGGTCTTCGTTTTCGGCGGGCTTTGCGTGATGGCGGAGGGGCGCTGCTCGCTTTCCTCCTACGCGACCGGCAAATCGCC
CAACATGAACGGCGTCTGTTCGCCCGCAAGCCATGTGCGCTATCGCCATGACGGTTCGGAACTCGTTTCGGAACTGGGCG
ATTATACGATCAATCGCTTTCCGGCAGGCGAAGCCGCCGGCTATCCGACGCTGTGCAAGGGCCGCTTCAACATCGGCGAT
GAGGAAGGCTATGCCTTTGAAGACCCCGTGTCCCTCGACGTGATGGATCATATCGACGAATTGCGCGCGGCCGGCGTTTC
CGCGCTCAAGATCGAAGGCCGCCAGCGCGGCAAGGCCTATGTGGCCGAAGTGGTTTCCACCCTGCGGCAGACCCTTGCCG
CCGGGCCGGAAAAACGGGCTGCCCTCCTGTCGCGCCTGCGCGCGCTCAGCGAAGGCCAGCAGACCACATCGGGCGCCTAC
GAAAAACGCTGGAGATAA

Upstream 100 bases:

>100_bases
GCAACGGTGCAGGACCTTTCGGCCCTGTCGTGCGAAGCATAGCCGGCTATATAAGGGAAAAAGCACTCGGCGCTGACGCT
CACGATCGGGAGGCGCATTC

Downstream 100 bases:

>100_bases
TCATGGCAACGAATGCGACCCCCAGCCTCAGCATGGGGCCTGTTCTTTTTCTGTGGGATGGGCCGAAATGGCGGGATTTC
TATTTCCGCATCGCCGACGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MELICPAGTPSALREAVQAGADAVYCGFRDETNARNFPGLNFSRDELRDAIGFAHARNCQVFVAINTFMRAGDEHIWYKA
VDDAAALGADAVILADFGLMAYTAERHPNQRLHVSVQASASNADAISFLIDAFKAKRVVLPRVLTIADIAKLGRKIPCEM
EVFVFGGLCVMAEGRCSLSSYATGKSPNMNGVCSPASHVRYRHDGSELVSELGDYTINRFPAGEAAGYPTLCKGRFNIGD
EEGYAFEDPVSLDVMDHIDELRAAGVSALKIEGRQRGKAYVAEVVSTLRQTLAAGPEKRAALLSRLRALSEGQQTTSGAY
EKRWR

Sequences:

>Translated_325_residues
MELICPAGTPSALREAVQAGADAVYCGFRDETNARNFPGLNFSRDELRDAIGFAHARNCQVFVAINTFMRAGDEHIWYKA
VDDAAALGADAVILADFGLMAYTAERHPNQRLHVSVQASASNADAISFLIDAFKAKRVVLPRVLTIADIAKLGRKIPCEM
EVFVFGGLCVMAEGRCSLSSYATGKSPNMNGVCSPASHVRYRHDGSELVSELGDYTINRFPAGEAAGYPTLCKGRFNIGD
EEGYAFEDPVSLDVMDHIDELRAAGVSALKIEGRQRGKAYVAEVVSTLRQTLAAGPEKRAALLSRLRALSEGQQTTSGAY
EKRWR
>Mature_325_residues
MELICPAGTPSALREAVQAGADAVYCGFRDETNARNFPGLNFSRDELRDAIGFAHARNCQVFVAINTFMRAGDEHIWYKA
VDDAAALGADAVILADFGLMAYTAERHPNQRLHVSVQASASNADAISFLIDAFKAKRVVLPRVLTIADIAKLGRKIPCEM
EVFVFGGLCVMAEGRCSLSSYATGKSPNMNGVCSPASHVRYRHDGSELVSELGDYTINRFPAGEAAGYPTLCKGRFNIGD
EEGYAFEDPVSLDVMDHIDELRAAGVSALKIEGRQRGKAYVAEVVSTLRQTLAAGPEKRAALLSRLRALSEGQQTTSGAY
EKRWR

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

Organism=Escherichia coli, GI1789548, Length=331, Percent_Identity=49.2447129909366, Blast_Score=332, Evalue=2e-92,
Organism=Escherichia coli, GI1788397, Length=333, Percent_Identity=31.5315315315315, Blast_Score=123, Evalue=2e-29,
Organism=Escherichia coli, GI87081910, Length=311, Percent_Identity=27.9742765273312, Blast_Score=103, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 35243; Mature: 35243

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELICPAGTPSALREAVQAGADAVYCGFRDETNARNFPGLNFSRDELRDAIGFAHARNCQ
CCEECCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCE
VFVAINTFMRAGDEHIWYKAVDDAAALGADAVILADFGLMAYTAERHPNQRLHVSVQASA
EEEEEHHHHHCCCCCEEEEEHHHHHHHCCCEEEEECCCHHHEECCCCCCCEEEEEEEECC
SNADAISFLIDAFKAKRVVLPRVLTIADIAKLGRKIPCEMEVFVFGGLCVMAEGRCSLSS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEEEECCCCCCHH
YATGKSPNMNGVCSPASHVRYRHDGSELVSELGDYTINRFPAGEAAGYPTLCKGRFNIGD
CCCCCCCCCCCCCCHHHHCEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCC
EEGYAFEDPVSLDVMDHIDELRAAGVSALKIEGRQRGKAYVAEVVSTLRQTLAAGPEKRA
CCCCEECCCCCHHHHHHHHHHHHCCCEEEEECCHHCCHHHHHHHHHHHHHHHHCCCHHHH
ALLSRLRALSEGQQTTSGAYEKRWR
HHHHHHHHHHCCCCCCCCCHHHCCC
>Mature Secondary Structure
MELICPAGTPSALREAVQAGADAVYCGFRDETNARNFPGLNFSRDELRDAIGFAHARNCQ
CCEECCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCE
VFVAINTFMRAGDEHIWYKAVDDAAALGADAVILADFGLMAYTAERHPNQRLHVSVQASA
EEEEEHHHHHCCCCCEEEEEHHHHHHHCCCEEEEECCCHHHEECCCCCCCEEEEEEEECC
SNADAISFLIDAFKAKRVVLPRVLTIADIAKLGRKIPCEMEVFVFGGLCVMAEGRCSLSS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEEEECCCCCCHH
YATGKSPNMNGVCSPASHVRYRHDGSELVSELGDYTINRFPAGEAAGYPTLCKGRFNIGD
CCCCCCCCCCCCCCHHHHCEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCC
EEGYAFEDPVSLDVMDHIDELRAAGVSALKIEGRQRGKAYVAEVVSTLRQTLAAGPEKRA
CCCCEECCCCCHHHHHHHHHHHHCCCEEEEECCHHCCHHHHHHHHHHHHHHHHCCCHHHH
ALLSRLRALSEGQQTTSGAYEKRWR
HHHHHHHHHHCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]