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The map label for this gene is yddA [H]

Identifier: 163844456

GI number: 163844456

Start: 254669

End: 256576

Strand: Reverse

Name: yddA [H]

Synonym: BSUIS_B0277

Alternate gene names: 163844456

Gene position: 256576-254669 (Counterclockwise)

Preceding gene: 163844457

Following gene: 163844455

Centisome position: 18.32

GC content: 57.86

Gene sequence:

>1908_bases
TTGAACAATGAGCGGCAGATATCCCAACAGGCCTTGCAGGCAAGGGAGAGGTCTGCCGTGTCCCGGATGACGTCGTTCTG
CGGCCTGTTGCGCGCCTATTGGGTGTCGGATCGCTGGAAGGAAGCCTGGGCGCTGACCGCTGCGATTTTCCTTATCACCG
CTTTCATCAGCAAGACGACTGTTTGGGTGGCGGAAGCTTCCGGCCATCCGATGAATTCCATTGTGAATGTGAACACCGCT
CCGGTACAAAGCCCGCTTGCAGCGGTTGTCACCAATGCGGGCGTTCTGATCATATTGATACTGGCAAAAGATGTGCTGCT
CGTTGGCTTCCGGCATCTGCTGTCCACGACATTGCATCGCAAATGGCGCAAATGGCTGAACGACAGTTTTTCCGACGCGC
TTCTCGACCGCAATCACACCCATTTCCATCTGCAACAGGGCAATGGCGCGCATCTGCCGGATAATGTGGACCAGCGCGTG
CAGGAATCCATCAAGGGCATGACAGGCGGCGCAATCGGGCTGGTGATGGGCATTGTCGGCGTCGTTCTTTCCGCCTTCTT
CGTCGGGCAGAAACTGCTGGAAATCTCCACCGAAGTGCACGGCCTTGAATTCCTTGGCTCCTATGGCGGTGCGCTGCTCG
CTTTGGCGGTCATTCTTCTCTATGTGCCGCTCGGCACGCTGATCGCGATCAAGATCGGCAAACGGCTGGAACGTCTCAAT
CTCGGCATGCAAAAGGCGGAAGGCTCCTATCGTGGCGAATGGACCACGCTTTTGCGCCGCAGTTTCCAGATTTCCGCTTC
CGAAGGCGAGAATGTGCAACGCACGGTCAACAACCGGCTCTACCGGGAAGTGGACGGGACGTGGGACAAGCTCAACCGTT
TCGATGCTGCCTATCTCGCCTTCTCGCAGGCCTATGGCTTCCTTTCCCTCCGCATCGTGGCCTATATTCCGGGCTTCCTG
CCCTATATGAGCGGCGCGGTGAACTTCCGCAATTACGTGACCGGCGCAGAGCTTGTAGCGGCCATGATCAATGATTGCTC
CTGGTTCATTCAGGTCATGCCGGCAATCGCCAATCTGCGCGCCAATGCGGGCCGCGTGATCGGCCTCGCCCAATCTATCG
AAAGCGTGCAGGAACCTGCGGAATTCTATGCGCGCAGCGGCGTCAACCGCTTTGCCTTCACCCACCAGCATCCGCGCTTC
GGCCTTTCGGTGCGCAACCTCACACTCATGCAGGGCCCGGCAAGCGAAACGCCGTTCCTGCGTTCAGGCGTCATCAATAT
GCGCGCTGGCGACTGGATTTATATGCGTGGCGAATCCTGCTCCGGCAAAACCTCCTTCATCAAGGCGCTGAATGGTCTGT
GGCCTTATGGCACCGGCAACATCATCTATCCGCAGGGCGCAAACTCGCTCTATGTGCCACAGGAGGCGAAATTTCCTTCC
GTTTCGCTGAAACAGCTCGTCGCGCTGCCGAGAGACGAAGGCGACTTCAACGACCTGGCCGTCGCAGCCGTGCTGCATGA
GGCAGGGCTTGGCGAATTTATCGAACGCATGAAGGATGCCGATGCGGGCAATTCGCCATGGGATATGGTGCTTTCGGGCG
GACAGAAGCAGAAAGTCATGCTTGCACGCATCCTGCTACACAAACCGTCTATCATCTTCCTGGACGAGGCAACCGGCGCG
CTCGATCCCGCTTCCAAACTGCGTTTCCATACGGCACTTAAAACCCGCTGCCCGGACGCCATCGTCGTCAGCATCATGCA
TGAGGAAAAGCTGCCCACGCTCGAAAGCGGCGAAAGCATCTTCTCTCATGTGCTGGATATCGCCAATGGCTATGTTTCGC
TCATCCCCGCCCATTTCGCGGCCGCCCCGGATGCGGAACCCGCAGTGTCGCTTATCGCAGCCGAATAA

Upstream 100 bases:

>100_bases
TTACTCCCGTTTTGTATTGACTATTAACATTACGTTAACCACAGTTTGTTGCAATATGTTACAAAGCGTTATCAAGGCGC
ATTGCGCAACGAGGTGTTGA

Downstream 100 bases:

>100_bases
GCCTTCTTTCACAACCGACATTTCATGTCAGGATATCCACGGTTGCAAAAGTCTAAAATTGGACTATATTCCAATTTAGA
CAAGATGGAGGCGATCATGG

Product: hypothetical protein

Products: NA

Alternate protein names: CDS102 [H]

Number of amino acids: Translated: 635; Mature: 635

Protein sequence:

>635_residues
MNNERQISQQALQARERSAVSRMTSFCGLLRAYWVSDRWKEAWALTAAIFLITAFISKTTVWVAEASGHPMNSIVNVNTA
PVQSPLAAVVTNAGVLIILILAKDVLLVGFRHLLSTTLHRKWRKWLNDSFSDALLDRNHTHFHLQQGNGAHLPDNVDQRV
QESIKGMTGGAIGLVMGIVGVVLSAFFVGQKLLEISTEVHGLEFLGSYGGALLALAVILLYVPLGTLIAIKIGKRLERLN
LGMQKAEGSYRGEWTTLLRRSFQISASEGENVQRTVNNRLYREVDGTWDKLNRFDAAYLAFSQAYGFLSLRIVAYIPGFL
PYMSGAVNFRNYVTGAELVAAMINDCSWFIQVMPAIANLRANAGRVIGLAQSIESVQEPAEFYARSGVNRFAFTHQHPRF
GLSVRNLTLMQGPASETPFLRSGVINMRAGDWIYMRGESCSGKTSFIKALNGLWPYGTGNIIYPQGANSLYVPQEAKFPS
VSLKQLVALPRDEGDFNDLAVAAVLHEAGLGEFIERMKDADAGNSPWDMVLSGGQKQKVMLARILLHKPSIIFLDEATGA
LDPASKLRFHTALKTRCPDAIVVSIMHEEKLPTLESGESIFSHVLDIANGYVSLIPAHFAAAPDAEPAVSLIAAE

Sequences:

>Translated_635_residues
MNNERQISQQALQARERSAVSRMTSFCGLLRAYWVSDRWKEAWALTAAIFLITAFISKTTVWVAEASGHPMNSIVNVNTA
PVQSPLAAVVTNAGVLIILILAKDVLLVGFRHLLSTTLHRKWRKWLNDSFSDALLDRNHTHFHLQQGNGAHLPDNVDQRV
QESIKGMTGGAIGLVMGIVGVVLSAFFVGQKLLEISTEVHGLEFLGSYGGALLALAVILLYVPLGTLIAIKIGKRLERLN
LGMQKAEGSYRGEWTTLLRRSFQISASEGENVQRTVNNRLYREVDGTWDKLNRFDAAYLAFSQAYGFLSLRIVAYIPGFL
PYMSGAVNFRNYVTGAELVAAMINDCSWFIQVMPAIANLRANAGRVIGLAQSIESVQEPAEFYARSGVNRFAFTHQHPRF
GLSVRNLTLMQGPASETPFLRSGVINMRAGDWIYMRGESCSGKTSFIKALNGLWPYGTGNIIYPQGANSLYVPQEAKFPS
VSLKQLVALPRDEGDFNDLAVAAVLHEAGLGEFIERMKDADAGNSPWDMVLSGGQKQKVMLARILLHKPSIIFLDEATGA
LDPASKLRFHTALKTRCPDAIVVSIMHEEKLPTLESGESIFSHVLDIANGYVSLIPAHFAAAPDAEPAVSLIAAE
>Mature_635_residues
MNNERQISQQALQARERSAVSRMTSFCGLLRAYWVSDRWKEAWALTAAIFLITAFISKTTVWVAEASGHPMNSIVNVNTA
PVQSPLAAVVTNAGVLIILILAKDVLLVGFRHLLSTTLHRKWRKWLNDSFSDALLDRNHTHFHLQQGNGAHLPDNVDQRV
QESIKGMTGGAIGLVMGIVGVVLSAFFVGQKLLEISTEVHGLEFLGSYGGALLALAVILLYVPLGTLIAIKIGKRLERLN
LGMQKAEGSYRGEWTTLLRRSFQISASEGENVQRTVNNRLYREVDGTWDKLNRFDAAYLAFSQAYGFLSLRIVAYIPGFL
PYMSGAVNFRNYVTGAELVAAMINDCSWFIQVMPAIANLRANAGRVIGLAQSIESVQEPAEFYARSGVNRFAFTHQHPRF
GLSVRNLTLMQGPASETPFLRSGVINMRAGDWIYMRGESCSGKTSFIKALNGLWPYGTGNIIYPQGANSLYVPQEAKFPS
VSLKQLVALPRDEGDFNDLAVAAVLHEAGLGEFIERMKDADAGNSPWDMVLSGGQKQKVMLARILLHKPSIIFLDEATGA
LDPASKLRFHTALKTRCPDAIVVSIMHEEKLPTLESGESIFSHVLDIANGYVSLIPAHFAAAPDAEPAVSLIAAE

Specific function: Unknown

COG id: COG4178

COG function: function code R; ABC-type uncharacterized transport system, permease and ATPase components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI4506341, Length=387, Percent_Identity=22.4806201550388, Blast_Score=82, Evalue=2e-15,
Organism=Homo sapiens, GI9945308, Length=166, Percent_Identity=30.7228915662651, Blast_Score=76, Evalue=1e-13,
Organism=Homo sapiens, GI4826958, Length=163, Percent_Identity=29.4478527607362, Blast_Score=73, Evalue=1e-12,
Organism=Homo sapiens, GI7262393, Length=142, Percent_Identity=30.2816901408451, Blast_Score=70, Evalue=5e-12,
Organism=Homo sapiens, GI9955966, Length=412, Percent_Identity=25, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI45243524, Length=412, Percent_Identity=25, Blast_Score=69, Evalue=1e-11,
Organism=Escherichia coli, GI1787772, Length=580, Percent_Identity=25, Blast_Score=162, Evalue=5e-41,
Organism=Caenorhabditis elegans, GI72000520, Length=501, Percent_Identity=23.3532934131737, Blast_Score=89, Evalue=9e-18,
Organism=Caenorhabditis elegans, GI17564250, Length=514, Percent_Identity=23.1517509727626, Blast_Score=88, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI72000518, Length=163, Percent_Identity=27.6073619631902, Blast_Score=76, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17542146, Length=275, Percent_Identity=25.4545454545455, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17532409, Length=442, Percent_Identity=22.3981900452489, Blast_Score=74, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI71984940, Length=361, Percent_Identity=24.9307479224377, Blast_Score=73, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17558664, Length=241, Percent_Identity=25.7261410788382, Blast_Score=69, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI71992285, Length=231, Percent_Identity=27.2727272727273, Blast_Score=69, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI25146777, Length=229, Percent_Identity=25.764192139738, Blast_Score=66, Evalue=6e-11,
Organism=Drosophila melanogaster, GI24643394, Length=568, Percent_Identity=20.9507042253521, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24659289, Length=266, Percent_Identity=24.0601503759398, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI23397593, Length=198, Percent_Identity=28.7878787878788, Blast_Score=66, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010509
- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR017940
- InterPro:   IPR011527
- InterPro:   IPR003593 [H]

Pfam domain/function: PF06472 ABC_membrane_2; PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 69655; Mature: 69655

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNERQISQQALQARERSAVSRMTSFCGLLRAYWVSDRWKEAWALTAAIFLITAFISKTT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
VWVAEASGHPMNSIVNVNTAPVQSPLAAVVTNAGVLIILILAKDVLLVGFRHLLSTTLHR
EEEEECCCCCCCCEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KWRKWLNDSFSDALLDRNHTHFHLQQGNGAHLPDNVDQRVQESIKGMTGGAIGLVMGIVG
HHHHHHCCCHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHH
VVLSAFFVGQKLLEISTEVHGLEFLGSYGGALLALAVILLYVPLGTLIAIKIGKRLERLN
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGMQKAEGSYRGEWTTLLRRSFQISASEGENVQRTVNNRLYREVDGTWDKLNRFDAAYLA
CCHHHCCCCCCCHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
FSQAYGFLSLRIVAYIPGFLPYMSGAVNFRNYVTGAELVAAMINDCSWFIQVMPAIANLR
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
ANAGRVIGLAQSIESVQEPAEFYARSGVNRFAFTHQHPRFGLSVRNLTLMQGPASETPFL
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHEECCCCCCCCEECCEEEECCCCCCCCHH
RSGVINMRAGDWIYMRGESCSGKTSFIKALNGLWPYGTGNIIYPQGANSLYVPQEAKFPS
HHCCEEEECCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCEEECCCCCCEECCCCCCCCC
VSLKQLVALPRDEGDFNDLAVAAVLHEAGLGEFIERMKDADAGNSPWDMVLSGGQKQKVM
CCHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHCCCCHHHHH
LARILLHKPSIIFLDEATGALDPASKLRFHTALKTRCPDAIVVSIMHEEKLPTLESGESI
HHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHH
FSHVLDIANGYVSLIPAHFAAAPDAEPAVSLIAAE
HHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHEECC
>Mature Secondary Structure
MNNERQISQQALQARERSAVSRMTSFCGLLRAYWVSDRWKEAWALTAAIFLITAFISKTT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
VWVAEASGHPMNSIVNVNTAPVQSPLAAVVTNAGVLIILILAKDVLLVGFRHLLSTTLHR
EEEEECCCCCCCCEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KWRKWLNDSFSDALLDRNHTHFHLQQGNGAHLPDNVDQRVQESIKGMTGGAIGLVMGIVG
HHHHHHCCCHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHH
VVLSAFFVGQKLLEISTEVHGLEFLGSYGGALLALAVILLYVPLGTLIAIKIGKRLERLN
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGMQKAEGSYRGEWTTLLRRSFQISASEGENVQRTVNNRLYREVDGTWDKLNRFDAAYLA
CCHHHCCCCCCCHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
FSQAYGFLSLRIVAYIPGFLPYMSGAVNFRNYVTGAELVAAMINDCSWFIQVMPAIANLR
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
ANAGRVIGLAQSIESVQEPAEFYARSGVNRFAFTHQHPRFGLSVRNLTLMQGPASETPFL
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHEECCCCCCCCEECCEEEECCCCCCCCHH
RSGVINMRAGDWIYMRGESCSGKTSFIKALNGLWPYGTGNIIYPQGANSLYVPQEAKFPS
HHCCEEEECCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCEEECCCCCCEECCCCCCCCC
VSLKQLVALPRDEGDFNDLAVAAVLHEAGLGEFIERMKDADAGNSPWDMVLSGGQKQKVM
CCHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHCCCCHHHHH
LARILLHKPSIIFLDEATGALDPASKLRFHTALKTRCPDAIVVSIMHEEKLPTLESGESI
HHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHH
FSHVLDIANGYVSLIPAHFAAAPDAEPAVSLIAAE
HHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]