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The map label for this gene is ttuB [H]

Identifier: 163844336

GI number: 163844336

Start: 135550

End: 136851

Strand: Reverse

Name: ttuB [H]

Synonym: BSUIS_B0147

Alternate gene names: 163844336

Gene position: 136851-135550 (Counterclockwise)

Preceding gene: 163844337

Following gene: 163844334

Centisome position: 9.77

GC content: 55.84

Gene sequence:

>1302_bases
ATGAAAAACAGCAATACAGCCATCACCTCGCCTGAGGTGGTGGAGAACATGACCTATCGCAAAGTCGCGTTTCGCATCAT
CCCGCTATTGATGATCTGCTACATCATCGCCTATCTCGACCGCGTCAATGTCGGCTTTGCGAAATTGCAGATGTCGGAAG
AGCTGGGTTTCAGCGAAGCCATTTATGGGCTTGGCGCAGGGCTGTTCTTTATCGGCTATTTCTTCTTTGAAATCCCGAGC
AATATCCTGCTTCATAAACTTGGCGCCCGTCTGTGGATTGCGCGCATCATGATTACGTGGGGCCTGCTGTCGGCCCTGTT
TGCCTTCGTGCAGACGGAATGGCAGTTTTATATTCTGCGCTTCCTGCTTGGTGCGGCCGAAGCCGGCTTTTATCCGGGCG
TGATCCTCTATCTGACCTATTGGTTCCCATCCCACCGCCGCGGCAAGATGTTTGCGCTTTTCCAGGCTGGCAGCCCCGCC
GCAGGCATTTTCGGCAACCCGCTTTCCGGCTGGATCATGGATCAGTTCCACGATACCGCAGGCTGGCAGGGCTGGCAGTG
GATGTTTGTTCTGGAAGCAATTCCGGCTGTCGTTCTCGGTGTCGTGATCCTGCTTTATCTCGACAATTCCGTTAAAGCCG
CCAAATGGCTGACCGAGGAAGAAAAGGCAATCATTTCACGGGATATCGAAGCCGACAGCAAGGGCAAGGCCGCAAGTCAT
TCGCTGATGTCCCTTGTTAAAAACCCGATGCTCTGGGTCATGACGCTCATTTATTTCTGCTTCGTCATGGGACAATACGG
CTTGACGCTGTGGATGCCGACGCTCATCAGGGCCTCCGGCGTGACCAGCAATGTCACAATCGGCCTGCTGGGCGCCATTC
CGTTCATCTGCGCAATTATCGCAATGGTGATCTTCAGCCGCAGTGCCGACCACTATCGGGAACGCCGCTGGCATCTCGTG
GTCCCTGCACTTCTTGGCGCGGTCGGTTTTGTCGTTGCGGCCAGCGCAACCAACACGACTGTTTCGATCATCTTCCTGTC
CATGGCTGCGGCTGGCGTTCTGGCTTGCGCACCGCTGTTCTGGTCGCTGCCGACGGCAATCCTCAGCGGCGCTGCGGCAG
CTGCCGGTATCGCGCTGATCAACTCCGTCGCCAACCTTGCCGGTTTCATCAGCCCTTACATGGTTGGCATCATTCGCGAT
GCGACTCACTCGTCGGAACTTGGCATGTATGTTCTGGCCGGGTTCCTGATCCTGGGTGCTGCAATCGTGCTGTGCATACC
TGCAAGCAAAGTCAACCGGTAG

Upstream 100 bases:

>100_bases
ATCATGCTTCAGGGCTTGCCCGCCCGAAAGCTGACAGACGAGCAGATTGAGGACCTTCTCCATACCTTTAAATAATTTTC
CGCTTCCGGGAGTGAAAGCA

Downstream 100 bases:

>100_bases
GTCTGTTCTTAAGCCCCAAACACGCGACAATCCCGGTTTACCGGGGTTGTCCTCCTCTGGATCAGCCAGTCACGACAGGC
CTGACAATATAGAGCGCATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 433

Protein sequence:

>433_residues
MKNSNTAITSPEVVENMTYRKVAFRIIPLLMICYIIAYLDRVNVGFAKLQMSEELGFSEAIYGLGAGLFFIGYFFFEIPS
NILLHKLGARLWIARIMITWGLLSALFAFVQTEWQFYILRFLLGAAEAGFYPGVILYLTYWFPSHRRGKMFALFQAGSPA
AGIFGNPLSGWIMDQFHDTAGWQGWQWMFVLEAIPAVVLGVVILLYLDNSVKAAKWLTEEEKAIISRDIEADSKGKAASH
SLMSLVKNPMLWVMTLIYFCFVMGQYGLTLWMPTLIRASGVTSNVTIGLLGAIPFICAIIAMVIFSRSADHYRERRWHLV
VPALLGAVGFVVAASATNTTVSIIFLSMAAAGVLACAPLFWSLPTAILSGAAAAAGIALINSVANLAGFISPYMVGIIRD
ATHSSELGMYVLAGFLILGAAIVLCIPASKVNR

Sequences:

>Translated_433_residues
MKNSNTAITSPEVVENMTYRKVAFRIIPLLMICYIIAYLDRVNVGFAKLQMSEELGFSEAIYGLGAGLFFIGYFFFEIPS
NILLHKLGARLWIARIMITWGLLSALFAFVQTEWQFYILRFLLGAAEAGFYPGVILYLTYWFPSHRRGKMFALFQAGSPA
AGIFGNPLSGWIMDQFHDTAGWQGWQWMFVLEAIPAVVLGVVILLYLDNSVKAAKWLTEEEKAIISRDIEADSKGKAASH
SLMSLVKNPMLWVMTLIYFCFVMGQYGLTLWMPTLIRASGVTSNVTIGLLGAIPFICAIIAMVIFSRSADHYRERRWHLV
VPALLGAVGFVVAASATNTTVSIIFLSMAAAGVLACAPLFWSLPTAILSGAAAAAGIALINSVANLAGFISPYMVGIIRD
ATHSSELGMYVLAGFLILGAAIVLCIPASKVNR
>Mature_433_residues
MKNSNTAITSPEVVENMTYRKVAFRIIPLLMICYIIAYLDRVNVGFAKLQMSEELGFSEAIYGLGAGLFFIGYFFFEIPS
NILLHKLGARLWIARIMITWGLLSALFAFVQTEWQFYILRFLLGAAEAGFYPGVILYLTYWFPSHRRGKMFALFQAGSPA
AGIFGNPLSGWIMDQFHDTAGWQGWQWMFVLEAIPAVVLGVVILLYLDNSVKAAKWLTEEEKAIISRDIEADSKGKAASH
SLMSLVKNPMLWVMTLIYFCFVMGQYGLTLWMPTLIRASGVTSNVTIGLLGAIPFICAIIAMVIFSRSADHYRERRWHLV
VPALLGAVGFVVAASATNTTVSIIFLSMAAAGVLACAPLFWSLPTAILSGAAAAAGIALINSVANLAGFISPYMVGIIRD
ATHSSELGMYVLAGFLILGAAIVLCIPASKVNR

Specific function: Component of the tartrate utilization system and may allow entry of tartrate and tartrate dehydrogenase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]

Homologues:

Organism=Escherichia coli, GI87082071, Length=415, Percent_Identity=35.9036144578313, Blast_Score=266, Evalue=2e-72,
Organism=Escherichia coli, GI2367379, Length=420, Percent_Identity=23.5714285714286, Blast_Score=99, Evalue=5e-22,
Organism=Escherichia coli, GI1789515, Length=414, Percent_Identity=25.3623188405797, Blast_Score=95, Evalue=1e-20,
Organism=Escherichia coli, GI1789152, Length=431, Percent_Identity=23.4338747099768, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI87082320, Length=386, Percent_Identity=21.7616580310881, Blast_Score=70, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17560030, Length=392, Percent_Identity=22.9591836734694, Blast_Score=66, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6321698, Length=327, Percent_Identity=25.6880733944954, Blast_Score=87, Evalue=8e-18,
Organism=Saccharomyces cerevisiae, GI6322612, Length=293, Percent_Identity=22.1843003412969, Blast_Score=72, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6322025, Length=243, Percent_Identity=25.1028806584362, Blast_Score=72, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6323032, Length=333, Percent_Identity=27.027027027027, Blast_Score=71, Evalue=4e-13,
Organism=Saccharomyces cerevisiae, GI6319876, Length=386, Percent_Identity=20.7253886010363, Blast_Score=67, Evalue=6e-12,
Organism=Saccharomyces cerevisiae, GI6319250, Length=366, Percent_Identity=22.1311475409836, Blast_Score=67, Evalue=7e-12,
Organism=Drosophila melanogaster, GI24584153, Length=397, Percent_Identity=25.4408060453401, Blast_Score=89, Evalue=4e-18,
Organism=Drosophila melanogaster, GI24654215, Length=389, Percent_Identity=22.879177377892, Blast_Score=73, Evalue=4e-13,
Organism=Drosophila melanogaster, GI19922400, Length=389, Percent_Identity=22.879177377892, Blast_Score=73, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24639764, Length=442, Percent_Identity=23.0769230769231, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24583789, Length=398, Percent_Identity=22.6130653266332, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24653727, Length=442, Percent_Identity=21.7194570135747, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI28573299, Length=421, Percent_Identity=22.3277909738717, Blast_Score=69, Evalue=9e-12,
Organism=Drosophila melanogaster, GI20130135, Length=456, Percent_Identity=21.9298245614035, Blast_Score=65, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24658658, Length=429, Percent_Identity=20.979020979021, Blast_Score=65, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004744
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 47406; Mature: 47406

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNSNTAITSPEVVENMTYRKVAFRIIPLLMICYIIAYLDRVNVGFAKLQMSEELGFSEA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHH
IYGLGAGLFFIGYFFFEIPSNILLHKLGARLWIARIMITWGLLSALFAFVQTEWQFYILR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLLGAAEAGFYPGVILYLTYWFPSHRRGKMFALFQAGSPAAGIFGNPLSGWIMDQFHDTA
HHHHHHHCCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCC
GWQGWQWMFVLEAIPAVVLGVVILLYLDNSVKAAKWLTEEEKAIISRDIEADSKGKAASH
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
SLMSLVKNPMLWVMTLIYFCFVMGQYGLTLWMPTLIRASGVTSNVTIGLLGAIPFICAII
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
AMVIFSRSADHYRERRWHLVVPALLGAVGFVVAASATNTTVSIIFLSMAAAGVLACAPLF
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
WSLPTAILSGAAAAAGIALINSVANLAGFISPYMVGIIRDATHSSELGMYVLAGFLILGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
AIVLCIPASKVNR
HHHHHCCHHHCCC
>Mature Secondary Structure
MKNSNTAITSPEVVENMTYRKVAFRIIPLLMICYIIAYLDRVNVGFAKLQMSEELGFSEA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHH
IYGLGAGLFFIGYFFFEIPSNILLHKLGARLWIARIMITWGLLSALFAFVQTEWQFYILR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLLGAAEAGFYPGVILYLTYWFPSHRRGKMFALFQAGSPAAGIFGNPLSGWIMDQFHDTA
HHHHHHHCCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCC
GWQGWQWMFVLEAIPAVVLGVVILLYLDNSVKAAKWLTEEEKAIISRDIEADSKGKAASH
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
SLMSLVKNPMLWVMTLIYFCFVMGQYGLTLWMPTLIRASGVTSNVTIGLLGAIPFICAII
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
AMVIFSRSADHYRERRWHLVVPALLGAVGFVVAASATNTTVSIIFLSMAAAGVLACAPLF
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
WSLPTAILSGAAAAAGIALINSVANLAGFISPYMVGIIRDATHSSELGMYVLAGFLILGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
AIVLCIPASKVNR
HHHHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7592429 [H]