Click here to switch to the map view.

The map label for this gene is fliM [H]

Identifier: 163844320

GI number: 163844320

Start: 122829

End: 123779

Strand: Reverse

Name: fliM [H]

Synonym: BSUIS_B0131

Alternate gene names: 163844320

Gene position: 123779-122829 (Counterclockwise)

Preceding gene: 163844321

Following gene: 163844319

Centisome position: 8.84

GC content: 59.41

Gene sequence:

>951_bases
ATGGATGACGCCACAACGCTGGAGCATAACCGTAAAAACGATGCCCTCGCGGAAAATCTTCTGCGTGCGGCAGGGCTTTC
GGGCGACGACCTGAAATCGCTGGCGCATGTGTTCAAGGACGCCTCCTCGCATTTCTGCGCCCGGCTGAAGCAGGGTTCCG
CGGCAGCCTTCGACGCTGAAACCGGCTCGGTGGAAAGCACCGACAAAACGGCGTTCAACGATATTTTCGACAAGGCTGCG
ATCATAACGCCTCTGAAGGCGGAACGCTGGGGCTGCTCGCTTTATCTTGCGCTCGACGCGGTTCTCGTCTTCTCGGTGAT
TGAGGCCATGTTCGGCGCACAAGGCAATCTCGGCCCTGTCGATGCCGATCGCCCCTTCGGCATGGTGGAGCAGAAAATCG
CAAATCTTCTGGCAGGCCATCTTGCGGGCGCGCTGGACCGGGTTTTCAATACCAGCTCCAGCCAGCCGCTATTTGCGCCC
GGCGATTGTATCGATACGGCGGATTTCGACCGTGAAAACTTCGAGCTTTCCCGGCTTTTCACCTGCCGCATCGCGGTGAC
GGCGGCAGGCAAGACCGGCCAGATGCATCTGCTTTTGCCGCGCAGCACCCACAAGCCGATGCAGGATGCAGTTGCCGCCT
TTCTTCGCCGCCCGATGGATCAGGCCGACCCGGCCTGGGCCAAAAAGCTTCGCCAGGAGGTAAGCCGTGCGCGCATCGAA
CTGGAAGCCTTCATGCAGCAGGGATCGATGTCGCTCGATGCGCTCTCCCGGCTCGAAATCGGACAGGTGCTGAAACTGCC
CGTCGACGCCATGGAACAGGTCCGGCTTCGCGCCGGAAACCAGCAGCTTTTCAAATGCACGCTTGGCAAATCCGGCATTC
ATTTCACAGTCAAGGTCGGCGACCCGGTCAATCAGGAAGAGGATCTCATCGATGAGCTTGTTGCTGGCTAA

Upstream 100 bases:

>100_bases
GAATATGGCCGCAAGACCATTTCCGCCTATGAGCGCCCGACCATCGACGTGGTGGAGCAGGAAACCATGGCAAGCGTGCC
AACACAGCAGGCCGCCTGAT

Downstream 100 bases:

>100_bases
CGTGCTTTCCACATTGATGGCTCTTGCCTCGCTTGCGGCTTTGATCGTGGTGGGCCGCAAGGCCAATGAAACCATCAGGC
TCGGCAAGGTGCTGGCGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MDDATTLEHNRKNDALAENLLRAAGLSGDDLKSLAHVFKDASSHFCARLKQGSAAAFDAETGSVESTDKTAFNDIFDKAA
IITPLKAERWGCSLYLALDAVLVFSVIEAMFGAQGNLGPVDADRPFGMVEQKIANLLAGHLAGALDRVFNTSSSQPLFAP
GDCIDTADFDRENFELSRLFTCRIAVTAAGKTGQMHLLLPRSTHKPMQDAVAAFLRRPMDQADPAWAKKLRQEVSRARIE
LEAFMQQGSMSLDALSRLEIGQVLKLPVDAMEQVRLRAGNQQLFKCTLGKSGIHFTVKVGDPVNQEEDLIDELVAG

Sequences:

>Translated_316_residues
MDDATTLEHNRKNDALAENLLRAAGLSGDDLKSLAHVFKDASSHFCARLKQGSAAAFDAETGSVESTDKTAFNDIFDKAA
IITPLKAERWGCSLYLALDAVLVFSVIEAMFGAQGNLGPVDADRPFGMVEQKIANLLAGHLAGALDRVFNTSSSQPLFAP
GDCIDTADFDRENFELSRLFTCRIAVTAAGKTGQMHLLLPRSTHKPMQDAVAAFLRRPMDQADPAWAKKLRQEVSRARIE
LEAFMQQGSMSLDALSRLEIGQVLKLPVDAMEQVRLRAGNQQLFKCTLGKSGIHFTVKVGDPVNQEEDLIDELVAG
>Mature_316_residues
MDDATTLEHNRKNDALAENLLRAAGLSGDDLKSLAHVFKDASSHFCARLKQGSAAAFDAETGSVESTDKTAFNDIFDKAA
IITPLKAERWGCSLYLALDAVLVFSVIEAMFGAQGNLGPVDADRPFGMVEQKIANLLAGHLAGALDRVFNTSSSQPLFAP
GDCIDTADFDRENFELSRLFTCRIAVTAAGKTGQMHLLLPRSTHKPMQDAVAAFLRRPMDQADPAWAKKLRQEVSRARIE
LEAFMQQGSMSLDALSRLEIGQVLKLPVDAMEQVRLRAGNQQLFKCTLGKSGIHFTVKVGDPVNQEEDLIDELVAG

Specific function: FliM is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the mot

COG id: COG1868

COG function: function code N; Flagellar motor switch protein

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein. Bacterial flagellum basal body (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliM family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001543 [H]

Pfam domain/function: PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 34362; Mature: 34362

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDATTLEHNRKNDALAENLLRAAGLSGDDLKSLAHVFKDASSHFCARLKQGSAAAFDAE
CCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCC
TGSVESTDKTAFNDIFDKAAIITPLKAERWGCSLYLALDAVLVFSVIEAMFGAQGNLGPV
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DADRPFGMVEQKIANLLAGHLAGALDRVFNTSSSQPLFAPGDCIDTADFDRENFELSRLF
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHEE
TCRIAVTAAGKTGQMHLLLPRSTHKPMQDAVAAFLRRPMDQADPAWAKKLRQEVSRARIE
EEEEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
LEAFMQQGSMSLDALSRLEIGQVLKLPVDAMEQVRLRAGNQQLFKCTLGKSGIHFTVKVG
HHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEEC
DPVNQEEDLIDELVAG
CCCCHHHHHHHHHHCC
>Mature Secondary Structure
MDDATTLEHNRKNDALAENLLRAAGLSGDDLKSLAHVFKDASSHFCARLKQGSAAAFDAE
CCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCC
TGSVESTDKTAFNDIFDKAAIITPLKAERWGCSLYLALDAVLVFSVIEAMFGAQGNLGPV
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DADRPFGMVEQKIANLLAGHLAGALDRVFNTSSSQPLFAPGDCIDTADFDRENFELSRLF
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHEE
TCRIAVTAAGKTGQMHLLLPRSTHKPMQDAVAAFLRRPMDQADPAWAKKLRQEVSRARIE
EEEEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
LEAFMQQGSMSLDALSRLEIGQVLKLPVDAMEQVRLRAGNQQLFKCTLGKSGIHFTVKVG
HHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEEC
DPVNQEEDLIDELVAG
CCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9858749; 11481430 [H]